mns1 (mns1,LOC102786898)


Basic Information

Item Value
gene id mns1
gene name mns1,LOC102786898
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 27281412 ~ 27287556 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039795453.1
GACGTCATTGTCAACGTTCAGTTTAATTGGGTGAACGTATGGGGACCGCGGCGTTCCCAGGACAACGAAACGCCAAACAACCGAGGAAACCCCAGCGTCACCTCAGGTTAACAACGGCAAATGAATCGCTCATGACGACCGTGCATCTAAATGCAAGTTAATTAATCCAGAGTTGTTTACGAATTAAAGAGTTAGGAGGAGTAAATCCAACAAGGCGGGAATCGACGAAAAGCCCCGCAAATATGAGTCGTAAGTGGACGTACAGCCAGCAGCAGAGGTTAATGTCTCAGCGCCAGAACCAGGAGCAGCTCAGGCAGCAGGAGGCCCGGCGTGTGGACCGAGAACGGCAGCTGCAGGCCGGTGTGCGGGACGAGGAGAACTCTGAGAAGAGGAGATACCTGCGACAGGTGCAGGACGAACTCAAGGAGAGGCAAATGGAGAGCGCTCTGCTGAAGGCAAAGGAGGAGAAAATAAACCGAGAAAAGCAACTTGAACAAGAGGAGAGAATGGCTAAAGAGCTGGCCCGCATCAACTATGAGACACAAAGGGAAGAGAAAATGAGGCAGTGTATTAAAGAGAACAGcATTGAGCTTCGAGAGCTGGAGTCAAAGCTGAAGTCTGCATATGTGAATAAGGAAAGAGCTGCACAGATCGCTGAGCAGGAAGCTATGAGGTTTGACACAATGCGTGAGGAGGCGGACTTAGCACGCAAGATGAAGAGCGAACATGAGCGAGCAGCCGTTGAGAAGCAGAAGCTGGAGCAGAAACGCCACGAGGAGCTGGCGCAGTATCAGAGACAGCTGGAGCAGCAACTCCTGGAGAGAGAGCGCAAGAGACAAGAGGCATACGAGGAGTTCCTCAAAGAGAAGCTCATGGTTGATGAGATTGTCAGGAAGATTTACGAGGAGGATCAGATGGAGAGACAGCTGAAACTGGAGAAGGTCAGAGCCACTCAGCAGCACATTGAAGAATTCAAGAAACAGCAGGCCGAGTGGAGACGCATGGAGCAAGAAAAGATGGAGGCCGAGAACAAACGCATCATGGAGTTTGCCAGCCATCAGGAGCACCTGCAGGAGAACAGAATGGCTAAGatcaaagagagagaagaagcaaAGGAACATCTTCATAAAATACTGTCTGAGAAGATCGAAGAGGAGAGGCAGCAGCGTGAAGAGATGGAGCGAGTCCGTGAGGAACTTTATTtagaagaacaagaagaggcTAACAGGCAAAGAGACCTTGAAGAGATGGAGAAGAAAATCAGACAGAGGCTGATGTTGCAGCAGACCTGCCAGCAGCAGATGGCTTTCAAAGAGATGCGGAGGcaggcagagaaagaggaggaggaggccttCAGGAAAATGATGATGGCTAAGTTTGCCGAGGACGATCGGTTGGAGCAGATGAACGCTCAGAAACGACGCATGAAGCAACTTGAGCACAAGCGCGAGGTGGAGAAACTGATCGAGGACAGAAGACGGCAGCATGAGGCTGACATGGAACTGGAGGCTCAAGAGCGAGCGATTGAGCAGGAGAGGGAGGCGCTGCGTCGGCAGATAATTGAAGAGGAGAGGCAGCGACTTCTTAAACGCCATGCAACAAAACTCCTTGGATACCTACCAAAGGGCTTGCTCCGTGAAGACGACCTGGAGCACTTTGATGAAGACTTCagaaaaaactttaaaacacGTCAGGCAGATATCTTTTCTGACGACGGCTGGGAAGGCGATGATTAAATCTTTGAATCTGAACTTGCACGCTACGTCACCTGATGGCAGTTTAAGGTTACAGTGAGCTAAGTCGCAATTCAAAGTTCTTAATTTCTCAGTATTTATGATAGCACTTGTTTAGCATTCAGaaacaacaaaatcattttaggacatgtttttattcattaggATTTTGTTGACAGGATCTTAATTAAAATCATTCCAGAAAAGATGTGAGGTTGTCTGGTGGCTAAATGTGATCATAATTGGGAGACAAATCTCTAAATTCCCTCTGAATTCAAAGTCTTCTATATATGTGAACCTCTCCGTGTTTACGACTTCCCCCAGTCTAGAGCTTTCATGAACTCGTCTTCTGTGAACGACAGCAGCTTGGCAGCTTCAAAATGCATCtgcacaaaacaaagaaaaactcaGTCCGTTGAGGTTTTGATGAAATAATGACGGTGGGTATTAACAGGGTATATGACCGGGTAGAGACACTTACCTTTTGTCTTTTGAGGATGTCAATCAGCTTGAGCTGTTTCTTGAAACCCACGATGAGTtctgctttctgtttttttagcattttgttttcagcaagtagattttctttactCTGATGTTCCTCGCTTATCTTGTCCTAAtttaaaaatcattttaaagaCTGAAGTTAGTAGAAGTGGAGCAGATCCTAACGTTTGTGCAACCTGAGGTCTCATTTTCAAACAGTTAAAACTGAAATTCAGTTGAAGCTGCTGCTTTAATGTAAATCTAAAAGAGCTAAATGAACTTTCCTCTTTCCATTTTCAAATATCATATTCTATGTTGTCCACAGATATTTTCAAGTCTACTGTGCAGCTTAACATTCAGCTGCTAATATACATGAGAGCCTCCTGATCTCCCTGCGTGCTACGGTTTTGTTGTATAGGTCAGGTTATCACTCCCTGTTTTTGACATCACTTTGTGGAGGATCTTTTATCTAAAATGATGCATTATCATTTTCCTTTTGATCTTAAATCTACAACACTAAGACACTCGTAATTACATGACCTTAAAAACAGCCATATTAAATGATCCCTGTAACACAGCATTTTGCTGATATGCCCTCTCCAAGTGGAATAGATTGTTTATATTCAAATAAAGATTCAATTATTTGTGATTGTTATAaa
>XM_039795454.1
GGACGAGGAGAACTCTGAGAAGAGGAGATACCTGCGACAGGTGCAGGACGAACTCAAGGAGAGGCAAATGGAGAGCGCTCTGCTGAAGaaaaagttcTTGCCACCCACCTCCAGCAGCAAACTGTGTTCCAGACCTTCCCATCTCCATTTCTTGTCTAAGAGCAGAACAAACACTTGTGACCATTGGGCctaaaacatcaacaaaaaaaacacggaTTAGCTTTGTTGTCATACTATACAGGATTGCACAGTAAAGTTTATTTGCAGCCCAGTTCATGCCAGACAGACATTGTATAAATAAGActatataaaatatacagtaaaatataaacaaatgtaGAATTAAAAACACTTCAGTAATAGTAGCTttgaagaaaaaatatatagcaATGTGTATATGCACACTGTACAATATGACTGAACAACTGTAGTGCAAAGAAGTGAGGTAGTAGTGGAGATGGTGTCAGGTTTTCCTTGAATCTTCTACTGTACTGTTATGACCACATTAAAGAGGTCATACAGTTATTATGAGGACATTTAATATAATTGTTAAATAGACTTCCTTGCACTTATTTTAAGGTTCAATTCCAGAACATTttcagatacagatacagaaaaCTTTCTTAATCCCCCAAGGGGCAATTCGTTTTACAGTCTATCCCATCCATGTGTTCATCACTGTGTACTgaactttttgtttgtttgttctacAGTGATGCATCCTTTTCTAGTGACAATGAATGTTTCTTTTACTGTAGAGTAGAACTTGATCTGATAATCAGACTGAACTGCCCTTTAAtttctgctgaaaaaaaatcacaaatgtgGATTCCAATTCAGATGTTTCAAACAGGTGAAAACATGCAAAGGAGGAGAAAATAAACCGAGAAAAGCAACTTGAACAAGAGGAGAGAATGGCTAAAGAGCTGGCCCGCATCAACTATGAGACACAAAGGGAAGAGAAAATGAGGCAGTGTATTAAAGAGAACAGcATTGAGCTTCGAGAGCTGGAGTCAAAGCTGAAGTCTGCATATGTGAATAAGGAAAGAGCTGCACAGATCGCTGAGCAGGAAGCTATGAGGTTTGACACAATGCGTGAGGAGGCGGACTTAGCACGCAAGATGAAGAGCGAACATGAGCGAGCAGCCGTTGAGAAGCAGAAGCTGGAGCAGAAACGCCACGAGGAGCTGGCGCAGTATCAGAGACAGCTGGAGCAGCAACTCCTGGAGAGAGAGCGCAAGAGACAAGAGGCATACGAGGAGTTCCTCAAAGAGAAGCTCATGGTTGATGAGATTGTCAGGAAGATTTACGAGGAGGATCAGATGGAGAGACAGCTGAAACTGGAGAAGGTCAGAGCCACTCAGCAGCACATTGAAGAATTCAAGAAACAGCAGGCCGAGTGGAGACGCATGGAGCAAGAAAAGATGGAGGCCGAGAACAAACGCATCATGGAGTTTGCCAGCCATCAGGAGCACCTGCAGGAGAACAGAATGGCTAAGatcaaagagagagaagaagcaaAGGAACATCTTCATAAAATACTGTCTGAGAAGATCGAAGAGGAGAGGCAGCAGCGTGAAGAGATGGAGCGAGTCCGTGAGGAACTTTATTtagaagaacaagaagaggcTAACAGGCAAAGAGACCTTGAAGAGATGGAGAAGAAAATCAGACAGAGGCTGATGTTGCAGCAGACCTGCCAGCAGCAGATGGCTTTCAAAGAGATGCGGAGGcaggcagagaaagaggaggaggaggccttCAGGAAAATGATGATGGCTAAGTTTGCCGAGGACGATCGGTTGGAGCAGATGAACGCTCAGAAACGACGCATGAAGCAACTTGAGCACAAGCGCGAGGTGGAGAAACTGATCGAGGACAGAAGACGGCAGCATGAGGCTGACATGGAACTGGAGGCTCAAGAGCGAGCGATTGAGCAGGAGAGGGAGGCGCTGCGTCGGCAGATAATTGAAGAGGAGAGGCAGCGACTTCTTAAACGCCATGCAACAAAACTCCTTGGATACCTACCAAAGGGCTTGCTCCGTGAAGACGACCTGGAGCACTTTGATGAAGACTTCagaaaaaactttaaaacacGTCAGGCAGATATCTTTTCTGACGACGGCTGGGAAGGCGATGATTAAATCTTTGAATCTGAACTTGCACGCTACGTCACCTGATGGCAGTTTAAGGTTACAGTGAGCTAAGTCGCAATTCAAAGTTCTTAATTTCTCAGTATTTATGATAGCACTTGTTTAGCATTCAGaaacaacaaaatcattttaggacatgtttttattcattaggATTTTGTTGACAGGATCTTAATTAAAATCATTCCAGAAAAGATGTGAGGTTGTCTGGTGGCTAAATGTGATCATAATTGGGAGACAAATCTCTAAATTCCCTCTGAATTCAAAGTCTTCTATATATGTGAACCTCTCCGTGTTTACGACTTCCCCCAGTCTAGAGCTTTCATGAACTCGTCTTCTGTGAACGACAGCAGCTTGGCAGCTTCAAAATGCATCtgcacaaaacaaagaaaaactcaGTCCGTTGAGGTTTTGATGAAATAATGACGGTGGGTATTAACAGGGTATATGACCGGGTAGAGACACTTACCTTTTGTCTTTTGAGGATGTCAATCAGCTTGAGCTGTTTCTTGAAACCCACGATGAGTtctgctttctgtttttttagcattttgttttcagcaagtagattttctttactCTGATGTTCCTCGCTTATCTTGTCCTAAtttaaaaatcattttaaagaCTGAAGTTAGTAGAAGTGGAGCAGATCCTAACGTTTGTGCAACCTGAGGTCTCATTTTCAAACAGTTAAAACTGAAATTCAGTTGAAGCTGCTGCTTTAATGTAAATCTAAAAGAGCTAAATGAACTTTCCTCTTTCCATTTTCAAATATCATATTCTATGTTGTCCACAGATATTTTCAAGTCTACTGTGCAGCTTAACATTCAGCTGCTAATATACATGAGAGCCTCCTGATCTCCCTGCGTGCTACGGTTTTGTTGTATAGGTCAGGTTATCACTCCCTGTTTTTGACATCACTTTGTGGAGGATCTTTTATCTAAAATGATGCATTATCATTTTCCTTTTGATCTTAAATCTACAACACTAAGACACTCGTAATTACATGACCTTAAAAACAGCCATATTAAATGATCCCTGTAACACAGCATTTTGCTGATATGCCCTCTCCAAGTGGAATAGATTGTTTATATTCAAATAAAGATTCAATTATTTGTGATTGTTATAaa

Function

symbol description
mns1 Predicted to be involved in cilium organization. Predicted to act upstream of or within meiotic cell cycle. Located in motile cilium. Is expressed in several structures, including Kupffer's vesicle; axis; forerunner cell group; nervous system; and neural tube. Human ortholog(s) of this gene implicated in visceral heterotaxy. Orthologous to human MNS1 (meiosis specific nuclear structural 1).

NR:

description
PREDICTED: meiosis-specific nuclear structural protein 1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039795453.1 False 2878 mRNA 0.45 10 27281412 27287556
XM_039795454.1 True 3286 mRNA 0.42 10 27281938 27287556

Neighbor

gene id symbol gene type direction distance location
znf280d znf280d coding upstream 2011 27261555 ~ 27279401 (+)
LOC120556070 NA coding upstream 20457 27252681 ~ 27260955 (+)
aldh1a2 aldh1a2 coding upstream 215524 27039505 ~ 27065888 (+)
adam10a adam10 coding upstream 279976 26969366 ~ 27001436 (+)
sltm sltm coding upstream 336818 26930828 ~ 26944594 (+)
prtga prtg,LOC102785529 coding downstream 68712 27356268 ~ 27389367 (+)
ccpg1 NA coding downstream 103566 27391122 ~ 27403314 (+)
rab27a rab27a coding downstream 123272 27410828 ~ 27425702 (+)
nudt21 nudt21 coding downstream 180309 27467865 ~ 27472009 (+)
tradd tradd coding downstream 202457 27490013 ~ 27499955 (+)
G30235 cgnl1 non-coding upstream 149504 27130176 ~ 27131908 (+)
G30148 aqp9 non-coding upstream 251858 27016958 ~ 27029554 (+)
G30124 NA non-coding upstream 388847 26891684 ~ 26892565 (+)
G30023 NA non-coding upstream 1052420 26228729 ~ 26228992 (+)
G30022 NA non-coding upstream 1052749 26228430 ~ 26228663 (+)
G30280 NA non-coding downstream 11273 27298829 ~ 27299567 (+)
G30287 ctcf,LOC103374180,LOC104965832,LOC102192328 non-coding downstream 163782 27451338 ~ 27455971 (+)
G30364 NA non-coding downstream 199248 27486804 ~ 27487597 (+)
G30423 NA non-coding downstream 349303 27636859 ~ 27637082 (+)
G30428 NA non-coding downstream 375644 27663200 ~ 27663466 (+)
nfat5b nfat5 other upstream 1353686 25883454 ~ 25927726 (+)
pkd1l2a vat1l,pkd1l2,LOC102776808 other upstream 1398052 25855839 ~ 25883360 (+)
sox6 sox6,LOC103363464 other upstream 2825724 24320064 ~ 24455688 (+)
plekha7b NA other upstream 2966767 24235723 ~ 24314645 (+)
G29433 NA other upstream 3548941 23727012 ~ 23732471 (+)
LOC120556198 LOC103371916,LOC104965843 other downstream 8201 27295757 ~ 27316181 (+)
nedd4a nedd4,LOC103371920,LOC102785817 other downstream 30814 27318370 ~ 27351837 (+)
LOC120555577 NA other downstream 121484 27409040 ~ 27410250 (+)
vrk3 NA other downstream 138732 27426288 ~ 27440414 (+)
LOC120555924 LOC103398348,LOC104965831,LOC103374185 other downstream 168860 27456416 ~ 27464759 (+)

Expression


Co-expression Network