LOC120556084


Basic Information

Item Value
gene id LOC120556084
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 14878022 ~ 14881139 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039795469.1
AGAGAACCGCCACAGGTTGACAGCTGGTACAGATGTTGAGCGAGTAACAGAAGAAACAAGACTCTCAACTGAGGTTCAAAGCAACAACAGAGCTCTACAGGCATCTGTGGCGCACCCGGCAGAGGATGCAGCTGGTTGTCATGGCAACAGTGCTGGCACTGGTGGGGGCGGGGCAGGGCTGCAGATCCAGGTGTCATCTGACTGAGGTCCGCATCCCCGTGGAGAGCTGTGGCATCACCGAGTGGATCAACACCAGAATATGTTTAGGACAGTGTTACCACGAGGATTCGCCCTACATCAGCCCTACTGGCAGGGAAAAACAGAAAGTCTGTAACGGGGACTGGTCCTACGAGGTGATGCACATTAAAGGATGTCCAGTGGGTGTCAGGTACCCTGTGGCCAGAAACTGCAGGTGTACCGAATGTAACCCCGAAAACGCGTACTGCGGGCACTTTCACGGACACGTATCCAGCTGTGTCTCATTTTAAAGAAACCTCTCGTCTATCCTACATTTACTTATTGTCTTTGTGTCACTTGACCTGGTACCAAAATAAACATGTATcactaa

Function

GO: NA

KEGG:

id description
ko00140 Steroid hormone biosynthesis
ko04913 Ovarian steroidogenesis
ko04927 Cortisol synthesis and secretion

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039795469.1 True 568 mRNA 0.51 3 14878022 14881139

Neighbor

gene id symbol gene type direction distance location
nr1h3 nr1h3,LOC102777562 coding downstream 49627 14811445 ~ 14828395 (-)
madd madd coding downstream 73255 14740192 ~ 14804767 (-)
muc15 NA coding downstream 223838 14638986 ~ 14654184 (-)
lingo1b LOC103361724 coding downstream 627690 14225777 ~ 14250332 (-)
kcnq1.1 kcnq1,LOC101467915,LOC102292488,LOC102797067,LOC100697082 coding downstream 724574 14101129 ~ 14153448 (-)
LOC120556194 cd151,LOC104922780,LOC103368535 coding upstream 136425 15017564 ~ 15043882 (-)
tspan4a tspan4,LOC102780031,LOC107381782 coding upstream 300581 15181720 ~ 15356059 (-)
LOC120555953 LOC104955210,LOC103368874,LOC100700844,LOC104922787,LOC101483392 coding upstream 537813 15418952 ~ 15427599 (-)
LOC120556362 slc25a44,LOC104955209 coding upstream 552283 15433422 ~ 15437488 (-)
LOC120556400 rps17,LOC100699764,LOC107389132 coding upstream 643205 15524344 ~ 15532010 (-)
G27425 arl14ep,LOC102778030 non-coding downstream 15559 14854725 ~ 14862463 (-)
LOC120556013 NA non-coding downstream 169360 14692209 ~ 14708662 (-)
G27395 fibin,LOC103373419,LOC106523552 non-coding downstream 171806 14703059 ~ 14706216 (-)
G27344 NA non-coding downstream 264693 14613115 ~ 14613329 (-)
LOC120556357 NA non-coding downstream 300227 14573451 ~ 14577795 (-)
G27433 NA non-coding upstream 8638 14889777 ~ 14890063 (-)
G27438 NA non-coding upstream 68439 14949578 ~ 14949985 (-)
G27440 NA non-coding upstream 71546 14952685 ~ 14953344 (-)
G27441 NA non-coding upstream 72399 14953538 ~ 14953891 (-)
G27450 NA non-coding upstream 135451 15016590 ~ 15017488 (-)
G27420 NA other downstream 34117 14842713 ~ 14843905 (-)
LOC120556476 NA other downstream 298011 14578027 ~ 14580011 (-)
G27321 NA other downstream 407677 14469758 ~ 14470345 (-)
G27075 LOC104939823,LOC100707594 other downstream 1782256 13069996 ~ 13095766 (-)
G26924 LOC108281047 other downstream 2573198 12304539 ~ 12304824 (-)
cfap70 LOC103368539,LOC102222702,LOC102790175,LOC102296598,LOC102204478,LOC104922799 other upstream 169523 15050662 ~ 15078830 (-)
LOC120556162 znf609 other upstream 1190430 16071569 ~ 16159882 (-)
LOC120555730 adamts7 other upstream 1440824 16321963 ~ 16408868 (-)
LOC120556401 LOC104927750,LOC104949847,LOC103353195 other upstream 2312374 17193513 ~ 17284509 (-)
G27925 LOC103353204,LOC106512954,LOC102223374,LOC104951141 other upstream 2626984 17508123 ~ 17513168 (-)

Expression


Co-expression Network