LOC120556133


Basic Information

Item Value
gene id LOC120556133
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 40648347 ~ 40652751 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039795536.1
TACTTTTTCTTTTGTATCGAGTACACAATCTATaccacaaacaaatacacatttatACCACAGTCAAAGTCATGGTCTGATGCCCAGCAGTATTGCCAGAGTAAGAAATACCGAGATCTGGCAACTTTCCTATACAATAACGACCTATACTCAACTGTCCATGAGCAGGACTTTCCAGTCTGGACTGGACTGCACAGAGAAGGGGGAACATGGAGGTGGAGCACAGGTCTGTCACAGTACAGAAATTGGGCACCGAGTGAGCCAGGGAACGGCGACTGTGTTTCCATCTCCTCGAAGAGCAAAATGATGGCTACCCAAAACTGCTCTGCTCGATTTCCCTTCCTCTGCTATGTGGACAACCTGGTCCTGGTAAAGGAGAACAAGACATGGGAGGAGGCGCTGGAGCACTGCCGAGCCCTCAGTTCAACCTCCCAACCCACCCTTCGCTACGAGCTGGTCAGCGTGCAGCCTGGAGAAGACCAAGACTACGTGATGAACAGGGTCATGGAGGCCGACACTGAGGAGGTGTGGGCAGGCCTCCGTTTCCTGGCCGGTGAATGGCTGTGGGTGAACGGGGCGAGTATGTTGTACTCTGACCTGCCCCTCTGCCCCACTGTGGTGCAGCACTGTGGAGCCTTGTCCAAGAACAACACAGGGAGCGTGGAGACCAAAGACTGTTCTGAGAAAAGGAACTTCCTGTGTTATAGCACATACTGACATCACCCCTATTATCTGCATCAGGGTGGTCACTAGCAGAAGTTTATTTCATTAGATGGCTGTAGATATATACAACTGTGTATGTTTTTAACACATTAAGGGAATATGTATCATACTAAGGAATAACTTTGCAAACGTTTGATCACACTTTATAATGAACTTTCTTACAGTAGACTTTGACTCAACTCTTTTTAACAAGCGGGTCTCTTATAGACTTAGTCAGGTATCAGCTTATTAGAAGTTAGTAATTTAAACCAACTGataaaaaaactgatttaaagTTGACTCTGATATGATGTCAAGTCGACGCCGACTAGTAGCTGATGAagtcattgacatt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039795536.1 True 1057 mRNA 0.46 3 40648347 40652751

Neighbor

gene id symbol gene type direction distance location
LOC120556376 NA coding downstream 17222 40598769 ~ 40631125 (-)
LOC120556512 glg1,LOC100701703,LOC101472041,LOC108242135 coding downstream 232284 40386097 ~ 40416063 (-)
samd4a samd4a,LOC102311861 coding downstream 334542 40244929 ~ 40313805 (-)
slc22a18 slc22a18 coding downstream 709481 39931306 ~ 39938866 (-)
LOC120556430 LOC101156874,LOC103142636,LOC107083861 coding downstream 737896 39902668 ~ 39910451 (-)
foxr1 NA coding upstream 13521 40666272 ~ 40671602 (-)
LOC120556279 atp6v0d1,LOC103462946,LOC107563463 coding upstream 20164 40672915 ~ 40682357 (-)
ndufs3 ndufs3 coding upstream 276719 40929470 ~ 40934556 (-)
ptpmt1 ptpmt1,LOC102795413 coding upstream 285064 40937815 ~ 40948565 (-)
prc1b prc1,LOC102796011 coding upstream 300164 40952915 ~ 40973681 (-)
G33109 NA non-coding downstream 84416 40562192 ~ 40563931 (-)
G33061 NA non-coding downstream 253644 40281473 ~ 40394703 (-)
G33068 NA non-coding downstream 313400 40331750 ~ 40334947 (-)
G33048 NA non-coding downstream 439572 40207391 ~ 40208775 (-)
G32952 NA non-coding downstream 598981 40048059 ~ 40049366 (-)
G33167 c1qtnf4,LOC102794664 non-coding upstream 265476 40918227 ~ 40918584 (-)
G33168 NA non-coding upstream 267583 40920334 ~ 40925054 (-)
G33196 NA non-coding upstream 284090 40936841 ~ 40937064 (-)
G33347 NA non-coding upstream 792778 41445529 ~ 41445742 (-)
G33368 NA non-coding upstream 908081 41560832 ~ 41565475 (-)
LOC120556146 NA other downstream 58683 40564241 ~ 40589664 (-)
LOC120556511 LOC102208128,LOC101468289 other downstream 506299 40049624 ~ 40142048 (-)
slc6a5 slc6a5 other downstream 1412601 39205275 ~ 39235746 (-)
LOC120556344 lrrc49,LOC102795887 other downstream 2821076 37788725 ~ 37827271 (-)
ss18l2 ss18l2 other downstream 3394921 37231141 ~ 37253426 (-)
LOC120556513 NA other upstream 8613 40661364 ~ 40663657 (-)
sirt3 sirt3 other upstream 1104876 41757627 ~ 41764896 (-)
G33711 NA other upstream 1746540 42399291 ~ 42402136 (-)
G33796 NA other upstream 2332472 42985223 ~ 42990770 (-)
G33847 NA other upstream 2561883 43214634 ~ 43214987 (-)

Expression


Co-expression Network