LOC120556135 (tmem255b)


Basic Information

Item Value
gene id LOC120556135
gene name tmem255b
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 21434259 ~ 21453303 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039795537.1
CACTCTTATTTATTATAACgatgttttcattttaagaaaaaagaagCATCTTACTCGCAGCTTGTTGCCAGTGCAGGATGAGGACTCTGTTTTGAATCAACAGGGACAAAAGAAACGCCACGCAAAGCGTCGCTTCAGCTGCCTGATCTCATTTTCCTAAATTTCAGAGCTAATTCATCCGGACTGAGTCAAAATGCCGCAGCCTGAAACCCAGCAGACAACTCAGACACCAGCGACAGAAATACTGGATCCAGCAGTTCACTACCTGCGTCGGAGGAAAACAGCCCTGTGGGTGACGGTGTCTCTGCTGGCTCTGTCTCTGGTGGTGATGGCTGTGGGTCTGATCTCTGCCACTCGCACCGACAACGTGCCTGTGGCTGGATATTACGCCGGCATCGCCCTGAGTTTTGGAGCATTTCTGGGTATTGTTGGCATCCACCTGTTGGAAAACCGCAGACCCATGCTCGTGGCAGCGATCATATTCATCAGTATCGGAGTCATCTCGTCTTTCTTCTGTGCCATTGTTGATGGGATCATCGCTTCAGAGTTCATTGACATAAGGCCTTTGCAGGAGAACATGTGTGACTTTTACGCCAGTGGAGCGGGCTACGCCTACGACAGCTACTATACTGAGGTGACGTGCCGTTCGTATGAAAAAACATGCAAGCTGAAGCTGAGGAGCAACacctgctactgctgctacctGTACAACTGTGACAGCACAAATTACCACACACAGTATTACGCGTTCACCGGGGTCAGCAGCTGCTGGGACGTGATCCACCTGCACCGTCTGCTGTGGGCCTCAGTGGTGCTCAACGTGATCAGCTTGTTCCTGGGCATCATCACCGCCGCCCTCCTCGGAGCATACAAGGATGTGCAGAAGCCGACTCTTCAGATTGCTCCCAgccccacacccccaccccacatCCTGTACAACCCGACCCAGCACATGCTCACCTACGCTGGCTTCTGCCCTTCAGGACAGAGTCTGCCTACCTACCCCAACTATCCAATACCTATGCAGCACAACAGCAGCTATCAGCAACCTGCTACTCCCCAGATGATCCCTGAGGGAGGCCATGCCTCCAACTCCTGCCTGTCTGAGGAGAACCAGCAGCAGCCCTCTCAGGCGCCCACCCAGCCACAGCCTCAGGGAACCACACAGGAACCGGGGGGCTACATGCTGACACCCAACGCTCCTGTCCTCTACGGATCCGCCTATAGCCCCTTTGAAAAACCGCCACCTTACGCCTGCTGAGCCCAGAGACAAACATCTGGGGCATGTTGGAGAAGAAATATCTGGTCAGAGTGAAAGTAGCACAAGACATTTCATAGGTGACCTTGTAGACGGAAACCCCCTCAGTGAGCTCCACGACTACTCTGTACTGATAGAAATGCTACATTTCCTGTGGTTGCACTGAGGAGAGACACAGATTTATAACTATGTAGTGtgattataaaaacatgattACGTTATTTCATGTGTATTCATCAAAAGAAcagtttgggaaatatgcttatttgctttcttgcggggagttagatgagaagattgataccactctgaTATCTCTTGgtgaatatgaagctacagctggctaacttagcttagcacaaagactggaaactgcTAAACCGGCCTAAGCACCTCTAAatctcactaattaacacgttaTATCTCGTTAGTTTGTGGTAAACTGGTCATGTGCAGGACTATTTATTGGTggcagttgccaggcaaccggcaaagactccaggaagttactgCTCATCtcactctcagcaagaaagcaaataagcacgTTTCCccaaatgtttttctttaagcCTAAAGCTGGCCTTCAGATGCTTACATGTTACATATATGTTAACTATTGAATACGTGTATAGTAGTACACTTGACTGTGATCTGATAGTTGTTTATGTTCTAACTTGTAGATTACAGGTCTTTCTGCATATTGTCTCACTATACTAGACTAATGTATGAGCAATTAAAAGGGCTTTCTTGAAATGTGAA

Function

symbol description
tmem255b Predicted to be integral component of membrane.

NR:

description
PREDICTED: transmembrane protein 255B

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039795537.1 True 2020 mRNA 0.48 9 21434259 21453303

Neighbor

gene id symbol gene type direction distance location
ercc5 ercc5,LOC104958986 coding upstream 43712 21381209 ~ 21390547 (+)
trmt10c NA coding upstream 60117 21372157 ~ 21374142 (+)
nkpd1 LOC104962748 coding upstream 82195 21331153 ~ 21352064 (+)
LOC120556481 NA coding upstream 146285 21286843 ~ 21287974 (+)
LOC120555780 diaph3 coding upstream 741285 20504098 ~ 20692974 (+)
adprhl1 adprhl1,LOC102790835 coding downstream 151814 21605117 ~ 21613287 (+)
grtp1a grtp1 coding downstream 161398 21614701 ~ 21626517 (+)
tgfbrap1 tgfbrap1 coding downstream 197442 21650745 ~ 21667717 (+)
mrpl16 mrpl16,LOC102799737 coding downstream 215215 21668518 ~ 21674299 (+)
LOC120556067 NA coding downstream 221121 21674424 ~ 21681765 (+)
LOC120556583 NA non-coding upstream 21050 21409652 ~ 21413209 (+)
G28804 NA non-coding upstream 112634 21321312 ~ 21321625 (+)
LOC120555568 NA non-coding upstream 291069 21142725 ~ 21143190 (+)
G28792 NA non-coding upstream 360504 21073541 ~ 21073755 (+)
G28778 NA non-coding upstream 607782 20826224 ~ 20826477 (+)
G28875 NA non-coding downstream 162413 21615716 ~ 21616158 (+)
G28880 cul4a non-coding downstream 183228 21636531 ~ 21638081 (+)
G28976 NA non-coding downstream 265185 21718488 ~ 21718824 (+)
G28990 NA non-coding downstream 433286 21886589 ~ 21889549 (+)
G29004 NA non-coding downstream 630642 22083945 ~ 22084401 (+)
grk1a grk1 other upstream 1112 21421110 ~ 21433147 (+)
G28826 NA other upstream 30809 21396213 ~ 21403450 (+)
G28770 NA other upstream 673112 20711104 ~ 20761147 (+)
LOC120555792 pcdh9,LOC102784100 other upstream 1440305 19772119 ~ 19993954 (+)
ercc3 ercc3 other upstream 1914041 19512356 ~ 19520218 (+)
tpp2 tpp2 other downstream 72289 21525592 ~ 21562814 (+)
dcun1d2b dcun1d2,LOC102792160 other downstream 143028 21596331 ~ 21603906 (+)
gpc5a gpc5,LOC103365231 other downstream 266731 21720034 ~ 21872025 (+)
ankrd11 ankrd11 other downstream 1311416 22764719 ~ 22895007 (+)
LOC120555548 LOC103365626,LOC104942698 other downstream 1528480 22981783 ~ 22994164 (+)

Expression


Co-expression Network