LOC120556173


Basic Information

Item Value
gene id LOC120556173
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 43434315 ~ 43437103 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039795588.1
ACCGCCAGTCCAGGCTCCAGCTGCTACTTTCACCCAGGCCACAGGACCGCCAGTCCAGGCTCCAGCTGCTACTTTCACCCAGGCCACAGGACCGCCAGTCCAGGCTCCAGCTGCTACTTTCACCCAGGCCACAGGACCGCCAGTCCAGGCTCCAGCTGCTACTTTCACCCAGTCCACAGGACCGCTTGTCCATTCTACAGTCGCCACTGGTAGCCATAATCCTGAGGATATGAGGGAAGACTTCTACATGGACTCCTCTGAATCAGAAGTTGAAATCCTCTCTGTTCTCCAGTCTCCAGTCAGGTGCAACAGCCCCAATGATGTCAAATGTCTGGCTGACATTTTGAAAGACTTTCAAAATGACCATCTAGACCTCGGTTGCAGTATCACAGTCATTGCCAGGCGCAAAAACATTCTTCAGAGTGCATGTGTTGCTCTAAGCAGGAGCTATTTTGCCTGGCATAAACTGCCACATATCGAGTTCGTTGGGGAGATGGCAGAGGACTATGCACAATGGACCAGGTGTCCGATGCCTGAACCCAGACTTACTTCTGCTCATGTGTGGCCAGAAGCCTGAGATGACCTCCTTTGACCTGGATATTTTCCAGGAAGAGGAGTTGAAGATGAAGCTTGAAAATGTTGTGAGATGCGGCACCAGTGAGGAGTTAGAGGAGCTCAAATGCACAATGGGGGACTGGATAGCTGACTGTGGTGTGCCAAACATTTACACAGCCTCTGTCAGGGACCTGCCTACAATTCACGGGCAAATAGTTACTCATTACTTGTACCACAgGGTGGCCAGTATGGTCCAACAGTTCATTGCCGGGATGAATTCATGTGGCCAGATGTGGGAGATTGTGGCGATGAACTGGAGAGAGTTCCTCCCACTGTTCACAAATGCAACACAGAAACTCTCCAGGAATGACATCAGGAACCTCTTCACAATATCCTGGAGTCCACAGGGCAGCAACCACAgagaacaggaggaggagacggTCTTCCAGTGGGAGTGCTGGCTGATGTCCATTCAAGAAGAAGAGATGGATATTTCCTTCGAGGAGTTGCTGGTGTTTGTGACAGGGGCCGATTCTATCCCCCCTCTTGGGTTCCCGCAGAAATGCCAGCTTGACTTCTATAATCAGGAGGATGGGAGCTGCCGCATTCCTTATTCATCAACATGTAGCCTTTGCCTTTTCCTCCCGAGAGGGGTTACAGAAGAAGAGTTCAGAAGACTTATGTTCCTTGCCCTGAAAGGGTCTCTTGGTTTTGGGAAGGTGTGAGGTAGAACAAAAAGTGTTCATTTAATGGGAAGTAGGCATTGGATTGTTTACACCAATAAA
>XM_039795589.1
GGTCATTCCTCTGAACTTGAACACTATGTGCCCCAGTGAAATACATCGGAATAATGCCTTGCGCCGGTCAAACCTGTACATTCGGCCACAGGCCACAGGACCGCCAGTCCAGGCTCCAGCTGCTACTTTCACCCAGGCCACAGGACCGCCAGTCCAGGCTCCAGCTGCTACTTTCACCCAGGCCACAGGACCGCCAGTCCAGGCTCCAGCTGCTACTTTCACCCAGTCCACAGGACCGCTTGTCCATTCTACAGTCGCCACTGGTAGCCATAATCCTGAGGATATGAGGGAAGACTTCTACATGGACTCCTCTGAATCAGAAGTTGAAATCCTCTCTGTTCTCCAGTCTCCAGTCAGGTGCAACAGCCCCAATGATGTCAAATGTCTGGCTGACATTTTGAAAGACTTTCAAAATGACCATCTAGACCTCGGTTGCAGTATCACAGTCATTGCCAGGCGCAAAAACATTCTTCAGAGTGCATGTGTTGCTCTAAGCAGGAGCTATTTTGCCTGGCATAAACTGCCACATATCGAGTTCGTTGGGGAGATGGCAGAGGACTATGCACAATGGACCAGGTGTCCGATGCCTGAACCCAGACTTACTTCTGCTCATGTGTGGCCAGAAGCCTGAGATGACCTCCTTTGACCTGGATATTTTCCAGGAAGAGGAGTTGAAGATGAAGCTTGAAAATGTTGTGAGATGCGGCACCAGTGAGGAGTTAGAGGAGCTCAAATGCACAATGGGGGACTGGATAGCTGACTGTGGTGTGCCAAACATTTACACAGCCTCTGTCAGGGACCTGCCTACAATTCACGGGCAAATAGTTACTCATTACTTGTACCACAgGGTGGCCAGTATGGTCCAACAGTTCATTGCCGGGATGAATTCATGTGGCCAGATGTGGGAGATTGTGGCGATGAACTGGAGAGAGTTCCTCCCACTGTTCACAAATGCAACACAGAAACTCTCCAGGAATGACATCAGGAACCTCTTCACAATATCCTGGAGTCCACAGGGCAGCAACCACAgagaacaggaggaggagacggTCTTCCAGTGGGAGTGCTGGCTGATGTCCATTCAAGAAGAAGAGATGGATATTTCCTTCGAGGAGTTGCTGGTGTTTGTGACAGGGGCCGATTCTATCCCCCCTCTTGGGTTCCCGCAGAAATGCCAGCTTGACTTCTATAATCAGGAGGATGGGAGCTGCCGCATTCCTTATTCATCAACATGTAGCCTTTGCCTTTTCCTCCCGAGAGGGGTTACAGAAGAAGAGTTCAGAAGACTTATGTTCCTTGCCCTGAAAGGGTCTCTTGGTTTTGGGAAGGTGTGAGGTAGAACAAAAAGTGTTCATTTAATGGGAAGTAGGCATTGGATTGTTTACACCAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039795588.1 False 1340 mRNA 0.50 6 43434315 43436513
XM_039795589.1 True 1394 mRNA 0.50 7 43434315 43437103

Neighbor

gene id symbol gene type direction distance location
LOC120555411 NA coding downstream 5160 43417323 ~ 43429155 (-)
LOC120555495 LOC104938484,LOC103359668,LOC102209123,LOC101072180 coding downstream 26594 43403538 ~ 43407721 (-)
LOC120555429 LOC104938483 coding downstream 33870 43396425 ~ 43400445 (-)
si:ch211-220f16.2 NA coding downstream 43980 43338654 ~ 43390335 (-)
LOC120556519 shank2,LOC102783952 coding downstream 129128 43017721 ~ 43305187 (-)
LOC120555671 NA coding upstream 42499 43479602 ~ 43496204 (-)
trnaw-cca_1 NA coding upstream 90478 43527581 ~ 43527653 (-)
LOC120556093 NA coding upstream 272597 43709700 ~ 43756173 (-)
si:ch211-71n6.4 LOC100691126,LOC102786012,LOC102297160,LOC102213240,LOC101463620 coding upstream 380629 43817732 ~ 43848899 (-)
trnav-uac NA coding upstream 499873 43936976 ~ 43937048 (-)
G33886 NA non-coding downstream 21033 43412635 ~ 43413282 (-)
G33885 NA non-coding downstream 22901 43410644 ~ 43411414 (-)
G33875 NA non-coding downstream 96528 43336810 ~ 43337787 (-)
G33857 NA non-coding downstream 98280 43335819 ~ 43336035 (-)
G33854 NA non-coding downstream 105223 43328552 ~ 43329092 (-)
G33918 NA non-coding upstream 52618 43489721 ~ 43489925 (-)
G33960 NA non-coding upstream 81850 43518953 ~ 43519895 (-)
G33976 NA non-coding upstream 194456 43631559 ~ 43631854 (-)
G33981 NA non-coding upstream 237546 43674649 ~ 43680211 (-)
G34002 NA non-coding upstream 339445 43776548 ~ 43777594 (-)
G33847 NA other downstream 219328 43214634 ~ 43214987 (-)
G33796 NA other downstream 443545 42985223 ~ 42990770 (-)
G33711 NA other downstream 1032179 42399291 ~ 42402136 (-)
sirt3 sirt3 other downstream 1669419 41757627 ~ 41764896 (-)
LOC120556513 NA other downstream 2770658 40661364 ~ 40663657 (-)
G33914 NA other upstream 15609 43452712 ~ 43456847 (-)
LOC120556522 LOC103374105,LOC102297981 other upstream 329588 43766691 ~ 43813225 (-)
G34078 NA other upstream 603257 44040360 ~ 44089691 (-)
LOC120556527 LOC102787635,LOC101476187,LOC100691227,LOC106610718 other upstream 1354879 44791982 ~ 44915666 (-)
G34518 NA other upstream 1701553 45138656 ~ 45271013 (-)

Expression


Co-expression Network