LOC120556194 (cd151,LOC104922780,LOC103368535)


Basic Information

Item Value
gene id LOC120556194
gene name cd151,LOC104922780,LOC103368535
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 15017564 ~ 15043882 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039795631.1
GCTGGGTGGAGTCaccagcaggagcagcagcagcagctccagcctTATTCAGTGCGTGAGCTCAGCACTGATTTTTGTGACTCCCTATTCCGCTGTCGGAGAGGCCTTTGTCTGAGGAAAGTGGAATGAAAACAGGCGACATATAGCAATATTTCTTACATATTTCATCGCTTTATATCGATAAGAAGAGCAAATATACGGGAGCATGGGGGTCTATGAGGAGAAAAAGGAAACATGTGGAACCATCTGCCTGAAATACCTCCTGTTTAGTTTCAACTTTCTCTTCTGGTTGGCAGGGGGCGCCGTGATGGCGGTGGGTGTTTGGACCTTGGTTGAGAAGAGCGACTACATCAGCCTTCTCTCCTCTAAGACCTACGCCGCCTCCGCCTACATACTGGTCCTGGCTGGGGCCATCGTCATGGTAACAGGCGTGCTGGGCTGCTGTGCCACCTTCAAGGAGCAGAGGAGGCTACTGCGAGTGTACTTTGTCCTGCTGCTGTGTATCTTCCTGTTGGAGATCCTGGCTGGCGTCCTGGCTTATATCTACTACCAGCAGTTGAATGAGGAGCTGAAGCAGAACCTGAGAGAGACCATGACCCAGAAGTATAAACAGAGCAGCCATGAGCCCATCACCAGGGCTGTGGACAAGCTGCAGCAGGAGTTCAAGTGCTGTGGCAGCAACAGTTCCTCCGACTGGGAAGAGAGCGTCTGGATTCGCTCCAGCGACGCAAAAAGCAGGAAGGTGCCTGACAGCTGCTGCAAGACGCTCACTGATCTCTGCGGCCTCAGGGACCACCCATCCAACATCTACAAGGTGGAGgGTGGCTGCATCACCAAACTGGAGAAATTCATCCTGGACCATCTGAAGATCATCGGGGCGGTGGGTGTTGGCATCGCCTGTGTACAGGTCATAGGGATGGTGTTTACGTGCTGCCTATATCGAAGTCTAAAGGCAGAGCCGTACTaggagaagcagcagcagaagaagaagaagaagaagaagagtgggtgggtgggtgaggGAGGCGACTTCATCACCACATGCCGTACTCAAATAGCCCATAGGTTCTTTTCTTTGCAACTTTGGCAAGCAATCAAATTTCACATCTGAGGGTCTCATTTTGGTAAACAAAGGGTggaaaaacactcccaaggtTTCTTGAAGTAATTAGGCACTCAAACTGCAGCCTCAGCTACATCTTCCAAGATCACAGCgctgtgaggaaaaaaaaaagcctccgaGAGAAACTGATGGGGAATTTCTAACGCAGACTGTGGAAATTGGCGTGGGACAGACTCCTTGGGACTTAAACACTGTAGTTTTCTTCCACTCCTGT
>XM_039795632.1
TGGACTCAGTGCTAGCTAGCATGGGGGTCTATGAGGAGAAAAAGGAAACATGTGGAACCATCTGCCTGAAATACCTCCTGTTTAGTTTCAACTTTCTCTTCTGGTTGGCAGGGGGCGCCGTGATGGCGGTGGGTGTTTGGACCTTGGTTGAGAAGAGCGACTACATCAGCCTTCTCTCCTCTAAGACCTACGCCGCCTCCGCCTACATACTGGTCCTGGCTGGGGCCATCGTCATGGTAACAGGCGTGCTGGGCTGCTGTGCCACCTTCAAGGAGCAGAGGAGGCTACTGCGAGTGTACTTTGTCCTGCTGCTGTGTATCTTCCTGTTGGAGATCCTGGCTGGCGTCCTGGCTTATATCTACTACCAGCAGTTGAATGAGGAGCTGAAGCAGAACCTGAGAGAGACCATGACCCAGAAGTATAAACAGAGCAGCCATGAGCCCATCACCAGGGCTGTGGACAAGCTGCAGCAGGAGTTCAAGTGCTGTGGCAGCAACAGTTCCTCCGACTGGGAAGAGAGCGTCTGGATTCGCTCCAGCGACGCAAAAAGCAGGAAGGTGCCTGACAGCTGCTGCAAGACGCTCACTGATCTCTGCGGCCTCAGGGACCACCCATCCAACATCTACAAGGTGGAGgGTGGCTGCATCACCAAACTGGAGAAATTCATCCTGGACCATCTGAAGATCATCGGGGCGGTGGGTGTTGGCATCGCCTGTGTACAGGTCATAGGGATGGTGTTTACGTGCTGCCTATATCGAAGTCTAAAGGCAGAGCCGTACTaggagaagcagcagcagaagaagaagaagaagaagaagagtgggtgggtgggtgaggGAGGCGACTTCATCACCACATGCCGTACTCAAATAGCCCATAGGTTCTTTTCTTTGCAACTTTGGCAAGCAATCAAATTTCACATCTGAGGGTCTCATTTTGGTAAACAAAGGGTggaaaaacactcccaaggtTTCTTGAAGTAATTAGGCACTCAAACTGCAGCCTCAGCTACATCTTCCAAGATCACAGCgctgtgaggaaaaaaaaaagcctccgaGAGAAACTGATGGGGAATTTCTAACGCAGACTGTGGAAATTGGCGTGGGACAGACTCCTTGGGACTTAAACACTGTAGTTTTCTTCCACTCCTGT

Function

symbol description
cd151 Predicted to be involved in cell migration. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be integral component of plasma membrane. Is expressed in several structures, including cardiovascular system; epidermis; mesoderm; musculature system; and swim bladder bud. Orthologous to human CD151 (CD151 molecule (Raph blood group)).

NR:

description
PREDICTED: CD151 antigen

GO:

id name namespace
GO:0016021 integral component of membrane cellular_component

KEGG:

id description
K06537 CD151, TSPAN24; CD151 antigen

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039795631.1 True 1337 mRNA 0.51 8 15017564 15043882
XM_039795632.1 False 1152 mRNA 0.52 8 15017564 15043125

Neighbor

gene id symbol gene type direction distance location
LOC120556084 NA coding downstream 136425 14878022 ~ 14881139 (-)
nr1h3 nr1h3,LOC102777562 coding downstream 189169 14811445 ~ 14828395 (-)
madd madd coding downstream 212797 14740192 ~ 14804767 (-)
muc15 NA coding downstream 363380 14638986 ~ 14654184 (-)
lingo1b LOC103361724 coding downstream 767232 14225777 ~ 14250332 (-)
tspan4a tspan4,LOC102780031,LOC107381782 coding upstream 137838 15181720 ~ 15356059 (-)
LOC120555953 LOC104955210,LOC103368874,LOC100700844,LOC104922787,LOC101483392 coding upstream 375070 15418952 ~ 15427599 (-)
LOC120556362 slc25a44,LOC104955209 coding upstream 389540 15433422 ~ 15437488 (-)
LOC120556400 rps17,LOC100699764,LOC107389132 coding upstream 480462 15524344 ~ 15532010 (-)
csnk1g1 csnk1g1,LOC103370372 coding upstream 493092 15536974 ~ 15578092 (-)
G27450 NA non-coding downstream 76 15016590 ~ 15017488 (-)
G27441 NA non-coding downstream 63673 14953538 ~ 14953891 (-)
G27440 NA non-coding downstream 64220 14952685 ~ 14953344 (-)
G27438 NA non-coding downstream 67579 14949578 ~ 14949985 (-)
G27433 NA non-coding downstream 127501 14889777 ~ 14890063 (-)
G27493 ddb1,LOC102208280,LOC106561926 non-coding upstream 105618 15149500 ~ 15154115 (-)
G27497 NA non-coding upstream 136857 15180739 ~ 15181020 (-)
G27499 taldo1 non-coding upstream 318152 15362034 ~ 15374091 (-)
G27545 psa4,psma4,LOC106562664 non-coding upstream 400444 15444326 ~ 15446509 (-)
G27551 rbpms2,LOC107381790,LOC104957780 non-coding upstream 431371 15475253 ~ 15482686 (-)
G27420 NA other downstream 173659 14842713 ~ 14843905 (-)
LOC120556476 NA other downstream 437553 14578027 ~ 14580011 (-)
G27321 NA other downstream 547219 14469758 ~ 14470345 (-)
G27075 LOC104939823,LOC100707594 other downstream 1921798 13069996 ~ 13095766 (-)
G26924 LOC108281047 other downstream 2712740 12304539 ~ 12304824 (-)
cfap70 LOC103368539,LOC102222702,LOC102790175,LOC102296598,LOC102204478,LOC104922799 other upstream 6780 15050662 ~ 15078830 (-)
LOC120556162 znf609 other upstream 1027687 16071569 ~ 16159882 (-)
LOC120555730 adamts7 other upstream 1278081 16321963 ~ 16408868 (-)
LOC120556401 LOC104927750,LOC104949847,LOC103353195 other upstream 2149631 17193513 ~ 17284509 (-)
G27925 LOC103353204,LOC106512954,LOC102223374,LOC104951141 other upstream 2464241 17508123 ~ 17513168 (-)

Expression


Co-expression Network