cdkn1ca


Basic Information

Item Value
gene id cdkn1ca
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 14092864 ~ 14094321 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039795637.1
ACTAGAGCAGACCAGAgggagacagcagcagcagcagcagcagcagcagcagcttcccCTTAAACTACAGGAAGACCTGATCCCCACCAGAACTCCACCAGAACTCCACCAGAACTCCACCAGAACCACGCTAGAAGGATGAATCCCATCATCAGGCGCAGAGAGTCCGTTTGCAGGAGTTTGTTTGGCCCGGTGGACCACGAGCAGCTGCGCCGGGACTTGACGCTGAAGCTGAAGGAGATCAGCGAGCGGGACAGCCGCCGCTGGAACTTTAACTTCCACACTGAGACGCCGCTGTGCGGCCGGTTTCAGTGGGAGGAAATACCCGCAGACTGCGCTGCTGCTATCTATCAGGAGTCCGCACAGCTGAAGGACGATGTCTGTGAGGAAGACGACAGGCTGAgtaaagaagtagaagaagaagaagaagaggaagaaagcgCAGCCGGGATCGACCAGGAGAACTGCTCCAGCGtctccaacacacacaagtgTCCCGCTGAAGTGACGCCCGTCCGGAGGAAGAGGATGCTCTCAAAACCGGCAGCCAAGAACAGAAACAACGCCCGAATTACAGATTTTTTCCCAAAGAGAAGGAAAACTACAGAAACCAAGAGCATCCAGAATCCTTTCCACACAAGTTCCAATGAAGCAGCTCTGTGCAAAACAATAAGGTGAACATCCTGCTGAAAATGGACGATTtactatatttatgttttatggACTGGACCAAGGCCTATTCACTGCACCAAAGGATTTTGttatatgttattttattagcctatacactttattttattgccatttttttgtattttgtgaaaCGGGGTTAAATTATACCacttttctgttatttattctATTTATGGACTTTTATTTAatgtctttgcatttttttttttttcattgataaGTTGCTGTAACAAATATGTTTGTttctagatgtttttttttcttctcattttcaTCTGTTTGTTATGTGAGCCTTGGAAAGACTTAATGACATTTTGTTTCCGTGTGTGTCTTTTTCAATCTTGTTGGTGGATTTCTGCAATAATGAGCTGCTTCGGTTAACTATATAGAAAAGCACTGTTTTGTCCTTGTCATGTTTGCCTAAATGAACTGAGATTGTAAATGCCTACAAATATTGCAATTTTA

Function

NR:

description
PREDICTED: cyclin-dependent kinase inhibitor 1C-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039795637.1 True 1158 mRNA 0.44 2 14092864 14094321

Neighbor

gene id symbol gene type direction distance location
traf6 LOC103361723 coding upstream 37370 14048291 ~ 14055494 (+)
LOC120556255 apip,LOC102794906 coding upstream 327237 13750416 ~ 13765627 (+)
slc1a2a LOC104925837,LOC100698156,LOC102211357,LOC103366006,LOC104946114,LOC101471102 coding upstream 369799 13697646 ~ 13723065 (+)
si:ch211-102l7.3 LOC102292170 coding upstream 396097 13678132 ~ 13696767 (+)
spg21 spg21,LOC102788283 coding upstream 821646 13252165 ~ 13271218 (+)
luzp2 luzp2 coding downstream 188838 14283159 ~ 14463293 (+)
fibinb fibin,LOC103373419,LOC106523552 coding downstream 608658 14702979 ~ 14706234 (+)
LOC120555721 arl14ep,LOC102778030,LOC103375558 coding downstream 757964 14852285 ~ 14864789 (+)
ddb1 ddb1 coding downstream 985473 15079794 ~ 15154115 (+)
taldo1 taldo1,LOC102780893 coding downstream 1267878 15362199 ~ 15374072 (+)
LOC120555409 NA non-coding upstream 91217 13997113 ~ 14001647 (+)
G27241 NA non-coding upstream 156136 13928199 ~ 13936728 (+)
G27220 NA non-coding upstream 348413 13737183 ~ 13744451 (+)
G27190 NA non-coding upstream 441369 13650883 ~ 13651495 (+)
G27179 NA non-coding upstream 674710 13417937 ~ 13418154 (+)
G27306 NA non-coding downstream 128988 14223309 ~ 14224234 (+)
G27320 NA non-coding downstream 372157 14466478 ~ 14466680 (+)
LOC120556358 NA non-coding downstream 479876 14574197 ~ 14577703 (+)
G27356 NA non-coding downstream 589512 14683833 ~ 14684116 (+)
G27358 NA non-coding downstream 636496 14730817 ~ 14731646 (+)
lrrc4cb LOC104946080,LOC107396660,LOC103367510,LOC108234802,LOC101071141 other upstream 236441 13809935 ~ 13856423 (+)
slc35c1 slc35c1 other upstream 416251 13671477 ~ 13676613 (+)
LOC120556202 NA other upstream 855045 13235235 ~ 13237819 (+)
G27086 NA other upstream 982525 13109757 ~ 13110339 (+)
lto1 oraov1 other upstream 2180142 11903272 ~ 11912722 (+)
bbox1 bbox1,LOC102798250 other downstream 614241 14708562 ~ 14735176 (+)
kcna4 kcna4 other downstream 795069 14889390 ~ 14965062 (+)
LOC120556271 tmem138,LOC104922799,LOC102296598,LOC102204478,LOC104956289,LOC103368539,LOC102790175,LOC102222702 other downstream 953556 15047877 ~ 15053622 (+)
LOC120556433 psma4,psa4,LOC106562664 other downstream 1347134 15441455 ~ 15446492 (+)
LOC120556001 rbpms2,LOC107381790,LOC103368877,LOC104957780 other downstream 1380826 15475147 ~ 15486451 (+)

Expression


Co-expression Network