stard5 (stard5)


Basic Information

Item Value
gene id stard5
gene name stard5
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 8604276 ~ 8621712 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039795650.1
ATACCTCTGCTACCGATTCTCcttttatttcaggaaattcATTCAAAGATTTGGGGGTTTTAACATTTTACCTGAGACGGGTGTGGGCTGTCGCGCGTCCAGAAAGGCTTTATAGTGAACAGTAATTGACAGAGTTGTCAAATACCCCAGACCCGCGAGCTAGCTGCTTGTTCGTAAACGATGTGGGCATTGCATAGGTTTCATTCATTTTGGCTAAGGCTAGCTCTGTAGCGGCGGTTGTACTTGCTAACGTTAAGTAACTTGTCGCTGCTGCATTTGCGTTACAAAACCCAGCTACATTGTGACTTTGATTAATTGAATTGAGAGATAACAATATCGCGTGTCAAACATTTAGCCACTGTAACGTCAGCTAGTCTGCAAAGTGAATTAACGCCAGGGTTAGCAAGGTAACGTAACGttattattttactatttattaTGGATTATGAACATAAAGCGAAGGCAGTGGGTGACTGCTTGCTAAGCTACAAGAGGGATGAGGCCGGGTGGAAAGTCTGCAAGAAATCGAATGACGTGGTTGTGTCTTGGCGTCCGTCGTCTGAGTTCCCTGGGAATGTTTATAAGGGCGAGGGGATTGTCAGCGGCAGCCCGGAGAAAGTGTGGGAGTGTCTGAAACCAGTACCCAGTGGGCTCAGAGTCAAGTGGGACAACAATGTCAAAAGGTTTGAGCTTTTGGAACAAATCACAGAGGACATCTCTGTCTGCCGAACAGTCACGCCCTCAGCAGCTATGGGCATCATAGCTCCACGAGACTTTGTAGATGTTATTTTAGTCAAGCAATACGAGGATGGCACCATTTCATCAAATGCCACCAATGTGAGTCACTCGGGCTGTCCTCCCCAGTCCGGCTACGTGAGAGGATTCAACCACCCATGTGGTTGCGTCTGTGTTCCCATCGCAGGAGAGCCCAACAAAACCCAGGTGTTCAGCTTCTTCCAAACGGACCTGGGTGGCTTTCTCCCCCGCTCCGTGGTGGACTCGTTCTTCCCCTCCAGCATGGCGGAGTTCTACAGCAACCTGAGCAAGGCCGTCAAGTCCCTCAAGAGCCTTTGACACCAAGAGTTCAGAGATCTGCCTTCAAATCTGGGGCCTACTGACTGGTCAGGCCTGTTGGTTTATTCCATTTTAAACCATTCAAACTCAGCAGCAATCGGTACACTGTCACTATTAACCGCTTATCTCAAATCTCTCCAGTCcacaatttgttttaaaaattttACTGCAGGAGGGATCCAAGTCCCAAAATAACAATGAGGGCTTGCATTTGTCAAAACCCGCATCTCAAACTCCAGTCTCTTTACATCCCCGTCTAAGGGATGAATTTATTTCCTCCAATCTGAAGAATGAAAATAGATGTAACATCTATATTTGTATATGTGCTAAAAGCACAGAAGATCTTTACTTTTTGCCACTTTGATGAGTCACTAGACATTCCCTCTTCTTATGATTGCATACTTCAGTGTGTACAGTGAACATGCATGTTGCATGGACCGTATATTTACCCTATGCTGGTGTCAGGTTGTTGGTTTAGAATACTGACTCATACCTCATATTTAGTCGTCTGTGTTGTACTTGAACTGCCATTTGCTCATCTCCAGCTCACCTGTAAGCCATGAATATCTGCCTCTTTAATCAGCTACACTGAAGCACAGGTGGGATGGCATTGGTGGCATTTTTAAACaaaggcagttttttttttaaatgccttttAAAATAGGATAAGTTATGTGCTGCTTTATTGAGCAGAAAAGTGTCTTcccacacacgcgcacgcacacattcatatatacatacatatagtaTCAATCAAAAGCTTGGACACATTCtgggaaagtgtgtccaaacctttgatATAGATATTTACAGTAGCTTATATTGTAAAAGTGAGTACTAGAAAGGTGGTTTTCCTATCACTAAGATGAAACTGTTCCAATGCATAATAATAAGCAATGCAAGGAGTAAAGACTCAACATTTATAAGTCAAAAGTAACCTGGCAAAGCTAGAGAGCTTTACTGGAGACACTGTTAAAGTGtaaaagatgctaaaatgcACCGCAAGGTGCCTTTTATGTAATGTGTCTAAACACCTTAAGAGTGCAATAATGCTCTGATAGCTCGTGCACTtggcaaaggaaaaaaaaacagtggggCGAATTCACAAAGAATGGATTGTGGCTGCTGATAGCACCATGAATTGTGCATCACTTGGGACCGCTATCTATGGCACTAACGATATTACAGCGCAAACTCAGTAAAGTTTTGCAGCTTAGTGCAATTTGCCCTATTTTGCCTCCGACTACAATTATTCATGTGGCAAAGTATACATTTTGCCTTTACGCCATTAACATAGTAGGCAGAACAATAACCGAGAGGTCCGCCGAGTTGCAGAGGCATTCCTCAAAACTTCTGACAAGGAATTTAAAGGTGACAGAGTTGGCAGCACAGTTAGGGGTGCGTTTCACCCTTTGTGGGTGCTTTTTCAGAATTacgtggtgtttttttttgcccaatCCTTTTGTGAATTTGCCCcagattgtttatttaaattgtttaaaaaaaagaagactccCCAATTTCAGATCACATTACTGCTGTAACATTGTcgattttttaagtttttggtTTAGAAGGCTTTTTTATTGACAATAGTTCACGGTAGAAATGGCAAAGGCCAGTCCCAGTATATACACAAGTCCAGTTTCTCAGAAGGCCACCTCACTGTCTACACATTGTAGTCAATGATGGTTCTGTACAGgcgagaaatgaatgggaaatgtATTCGTGGAACTAAATGACACTATTTCCACTTTTTAATTCTTATTATAATTCTTATGTAATACCTGGACAGAAGTCCATCCACACTGACCAACggctttatttacagtatatcatGTTGTCTTGTTATTTAACGTAAAAAAAAGTGCCAGCCCCGCGGCAGCCAACCACCACAAATAGACTCTAATTTCTGTGGTActgtataaaaatataaaagttgCTCCTGCATTATATTTACATAGATAATATATACCAATGTAAGTTATTCCACAACTGCCAGAATCTTCTTTTAGGTATTcagaaagaaaatggaaatcACTACAAATGTACTGTACTCATTTTATTCCTCATAGGCTGAGACTCACTTTGGTTGGAGAAATAAGAAAATGCTACATCTGGGTGGTTTGAAAAGACACCACAGTTCAGGGTTAACCCTTCCCTTGATTCTCTCTGTATTAAGGTTGGCGTGGACAGTTCCTTAATGATAAGTTATGGATCCCTCAGTATGAACTGAATGAATAGTAGCGAACTGTTTGTGAACCCCACTTTCTCCAGAGCCTTCATTTGTATAATATGCTATACTGTATAGGGTGACATGTTTTAACTAGTCTTTGTTTAGGAGTATCaggattcctttttttttaaagtttgtctcttaacctgcaa

Function

symbol description
stard5 Predicted to enable bile acid binding activity and lipid binding activity. Predicted to act upstream of or within lipid transport. Orthologous to human STARD5 (StAR related lipid transfer domain containing 5).

NR:

description
PREDICTED: stAR-related lipid transfer protein 5

GO:

id name namespace
GO:0006694 steroid biosynthetic process biological_process
GO:0030301 cholesterol transport biological_process
GO:0015485 cholesterol binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039795650.1 True 3462 mRNA 0.41 6 8604276 8621712

Neighbor

gene id symbol gene type direction distance location
LOC120556467 tmc3 coding upstream 2598 8545261 ~ 8601678 (+)
mex3b mex3b coding upstream 457349 8140884 ~ 8146927 (+)
efl1 efl1 coding upstream 534609 7939212 ~ 8069667 (+)
LOC120555922 NA coding upstream 820777 7775633 ~ 7783499 (+)
adamtsl3 LOC101469981 coding upstream 933475 7354877 ~ 7670801 (+)
mesd mesdc2 coding downstream 123450 8745162 ~ 8750880 (+)
abhd17c abhd17c,LOC102793890,LOC100694079 coding downstream 434621 9056333 ~ 9091510 (+)
LOC120556464 NA coding downstream 639499 9261211 ~ 9296717 (+)
lins1 NA coding downstream 1010295 9632007 ~ 9642958 (+)
lrrk1 lrrk1 coding downstream 1239440 9861152 ~ 10096639 (+)
LOC120555519 NA non-coding upstream 105420 8497892 ~ 8498856 (+)
G26098 NA non-coding upstream 233451 8370582 ~ 8370825 (+)
G26096 NA non-coding upstream 325217 8278307 ~ 8279059 (+)
G26095 NA non-coding upstream 339111 8264932 ~ 8265165 (+)
G26093 NA non-coding upstream 340333 8263701 ~ 8263943 (+)
G26206 NA non-coding downstream 140253 8761965 ~ 8762290 (+)
G26207 NA non-coding downstream 144850 8766562 ~ 8766987 (+)
G26208 NA non-coding downstream 145324 8767036 ~ 8767243 (+)
G26210 cemip non-coding downstream 151368 8773080 ~ 8773325 (+)
G26211 cemip,LOC103130034 non-coding downstream 153735 8775447 ~ 8775662 (+)
LOC120556365 LOC102793592,LOC103366350,LOC101487888,LOC102307622,LOC100694289 other upstream 1598598 6993956 ~ 7005678 (+)
rwdd3 rwdd3 other upstream 2208570 6382570 ~ 6395706 (+)
LOC120555541 NA other upstream 2314500 6262410 ~ 6289776 (+)
G25743 NA other upstream 2316199 6287048 ~ 6288077 (+)
G25708 NA other upstream 2569083 6034209 ~ 6035193 (+)
G26205 NA other downstream 131989 8753701 ~ 8760301 (+)
G26236 NA other downstream 447017 9068729 ~ 9155343 (+)
cers3a cers3,LOC102798777 other downstream 711517 9333229 ~ 9378611 (+)
adamts17 adamts17 other downstream 769396 9391108 ~ 9604462 (+)
asb7 asb7,LOC102792420 other downstream 1031866 9653578 ~ 9677027 (+)

Expression


Co-expression Network