ccdc102a (ccdc102a)


Basic Information

Item Value
gene id ccdc102a
gene name ccdc102a
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 6847479 ~ 6901349 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039795656.1
ccacacccccccctTCATCCACCAAACCACTGCCTCCATCATGAACCACACCCCCAGCCCCCACCTGTCGGACGGCGGTAAGTCGGCCGGAGGCGGCCTGCTGTGCAGCCTGGGCCTGGGGTCCGACAGGGGGATCCGCTCCCCGGACAGCCTCACCCACACCCCCAGCCCCACCGGAGAAACGCCCAGCTCCAGCCCCCCGCTGCTTCTGTCCCCGGGGCTGGGAGGCTTTGGCCTGGGGTCCCTGGGGGCCATGGGCGAGGGAGCCGGGGCCGACTGGGAGAGCAGGGAGGAGCTGAGGCTCCGGGAGCTGGAGGAGGCTCGGGCCAGAGCCGCCCAGATGGAGAAGACCATGAGGTGGTGGTCGGACTGCACCGCCAACTGGAGAGAGAAGTGGAGCAAGGTCCGCGCCGAGCGTAACCGCGCGCGCGACGAGGTGCGCCAGCTGAGGCAGCGGCTGGACACCCTCACCAAGGAGCTGACCAGCGTTCGGCGCGAGCGGCAGGAACTGGCCTCCGAGAACGAGACGCTGCGGCTGGAGACGCTGCGTCTCCACGGCGGCCATGCCGCCGTCGACGCTCCCCCTCCGTCGGCCACTTctccgtcctcctcctcctccccggCACACCCTCGCGGTGgtgcttcctcctcctcctctccatccatacctccctcctcccccgcctcctccgcctcctcctctCAGGTCCACGCCGACGGGAAGCTGGACGGGGTGGACCGGGTGGGGGAGGGACCCCCGGGGTCTCCAGAGCCAGAGCCGGTGAGGGACGTGGACTTGGACAGACAAAAAATGGCTCAACAAAAgGACCTGGAGGTGCTGGAGTCGGTCCTGCGTTCCCGGGCCCCGGACGGCGACACGCAGGAGGCCTGGGCAATCACCTCGCGCTCCTCCTCGGGTCCCAGCCGGCAGGAAcgcagcaggcagctgtggGAGGACATTAGCACGGTGGAGGAGGACTCCAGCAGACTCAACGCCCTGCAGCTTCGCCTGGATGAGTCCCAGAAAGTCCTGCTGAAAGAGCGAGAAGACAAGCTTGCACTGAGTAAGAGCATCGAGAGGCTGGAGGCTGAACTCACTCAGTGGAAATGTAAATATGAGGAGCTCAGCAAGACCAAACAGGAGGCCCTCAAACAGCTGAACCTGCTGAAGGAAATGCACCAAGATGAACTCGGCCGCATATCTGAAGACTTGGAGGACGAACTGGGAGCCCGAACCAGTATGGACAAGAAACTAGCTGAACTACGTACTGAGATGGAGAGGCTGCAGGTGGAGAACGCTGCGGAGTGGGGGCGCCGGGAGCGCTTGGAGACGGAGAAACTTGCCCTGGAGAGGGACAACAAGAAGCTGCGAGCTCAGGCTGAAGACCTGGAGGAGCAACTGGCCAAGAAGCGCCGGCAGGCGGCCTCGGCACTCGACATCGACCTCAAGGCCATCCAGAGCGagctgtttgagagaaacaagGAGCTGGCTGACCTCCGCCATGTCCACGCTAAGCTGAAGAAGCAGTACCAGGAGAAGACGGCCGAACTGGTCCACGCCAACCGGAGGGTGGAGAGCCACGAGGCCGAAGTCAAAAAGCTGCGACTGagggtggaggagctgaagaaagaATTAGGCCAGGCAGAGGATGAGTTGGATGAGTCCCATAACCAGACCAGGAAGCTGCAGAGGTCTCTGGATGAGCAGGTGGAGCAGACTGAGAACCTGCAGGTGCAATTGGAACACTTACAGTCAAGacTGCGGCGGAAGCAGCAGAGTCCTGGTCTGTTTGGGAAAATGCGATCAGCTCGATTCAGTCCTGAAAACCAAGATGGTCCGACTAGCGACgtggacgaggaggaggaggagctgcagctCCAGATcccatgagacacacacacacacacacgcacacgcacacacacagtgatacagGACATACTTTTACACAAACGTATAGAAGTTGGATACtgttgctcttggggggaaacTTTGTATCTCAAGATATGGTCACATTTTGCTACAGAAAGCAGCTGTCAGGCCCAGCTAGTTCTTAAAGTACCAGTCCAACATTATGGGAGACATTTTACCCAGAGTCAGATCAAAAGGTCAATATCACTTTTACCTCTGTTTATCCACGCGTCCTTGTTGGATGCAAATGTTAGCATCGCTGCTTGCAATAATCAAATTATcatcaaaaacaaatgaacaaaaaaagcaaagcaagCCTTGTCGAACAAAGAGACTGCAAAGATGCCACACAATTGTTTATCTGGACTTTAAACATGAAAGAGGTAACGTGACAAATTTTCCACCAAGGAGCAATCACACACCTACGGTAATCCTCacatggaacacacacacattctcatacacactaagacacacacatgcttcgACATACAGGCGCACAGCAACAGGCTCAGCAGGCGTTTGACAGACATTAACAGGATGTCCGGTAGTGTAATGCTGAATGAAAGGATCTTTCTTCAACTTCCACCAAACCACTCTGGCAGAGGCCGACCTGTATCATCCTTTCAGTGTACTCCTTCTTACCTCATATCATCACAAGCATTGCACCTGTCGCATCTGAACTGTGCTACTGTATTCAAACAAGCCCCGAGCCCACATCTACATCACCAGTATTATTTCCTCATAGCGTGTGCTGTGAACAAAATGCTTTCCATGTCCCCCTGAGCTTGCAAATGTTGATATACCACAAGGGAATGTCAGTCAGAAATTTCTTCCAAATATCGAAGTCTATGTCCCACGTATTTCAAGTTCACAACCAATGCTGGGAGCACACTACACCTATCCACTTTTCTTCATAGCAAATGTGCTTAATGCTGCCCTACTTGCAATCTATCATTAGCCGATTTTCAGTTTAAAAGCATGCAACCTGCTCTTGAGGGCTGTGTTCAGATTTTGGGCATGAACGAAGAATACAAAAGAGGCACAAAAGGCGCAAATAGGTCTATGCATTTTTCTATACCCAAGACCTGAATCCGGCTCTTACCTTTCAGACTCGACTCAGATGAACCCGCGTGCTACTGCCGAATTTGAGACCTGAACCAGAGGTTTTTGTTATTTCCTCTCCAAAGACAAATAGGTATATGCTTGTTTTAGAAAGGCTTTTTACACACATAACAATGAATGAAAACAAtatgcaccacacacacatatataacatcTACTAGCCAATAAGCCATAGGTTTAGTGGCAGTACACACCTGTAATGTGATCTAATGTTGCACTCTTGTCTGAAGATGACAACAGAACGTACCGTTGAATCTCTCCGTATTGATCTGCCAACCCCTGCAATGGtgtgcattttaaaaaaaaaaaaaaaaaaagagggaaagggATGAAGTGTACATCCTGCAGCATTTGAGGGAAATGTAAAGTAGATGGAGAAAGGAGTAAAAGGCCTGTAACTGTGGGGCACTTGTGTGTGTACTAAGCCTGATCATTATTTTAATGATGTAGTGTGTTCCCAGCATGACTGAGGCTGCTCCTCGACAATAAACAAATGTAACAGTACATAGGTAATAtgtacgtaaaaaaaaaaaaaaagcttagtaAGAGAATGTACAACATCCTTGTTAAACGAAGAGATTGTGGGATGTAATGGATGGCGttgttagtaaaaaaaaaaaaaaaaaatctcttcttTTATTGTTTCTTGTGAAGGAAAATATGCATCTGTGAATGTCCACTAAAGGGCCTGGTCACATCAGCATTTACATCTGCTTCATTTCCTGAGAAAGGCCTATTCATTCAGTCTGGGTGGAAAACGCCTCCAAAAGCAGCATTTAGACATCACTGAAACCCAGGCCAGTAAATTTCCCGTAGGCTTAATTATCCCCGGCGCCTTTAAGACGGCCCATGTGTTCAACAGTAGGGGGAGTTTTTGGATATGCTGCGTGTTGGACTGAAgagtttaatttatttgtacAAAACTTGGTTGGGCTAAATCTCCCGCCTGTGAAAGAGCTCTAGAGTCTAGCACAGGCGGGGATGGATGCAGTTGTGAAAGcaataaaacattcatttatctTCCACCGCCGCCCACAGTCGCGCTCTGCCTCGGCCTCAACTCTGAACGCTGGAAGGGGACCAAGATATTTTTACCGATCAGGATTCTGAACTATTTATGTTGTCGTTGTTATGGTTTAGTTTTTATAAATGATCTGTACCACGGTGGTTTTGTATTAGCTCTATAAATGTCAACTGTACATATAAAAGAAGCATGAGTAA

Function

symbol description
ccdc102a Predicted to enable cytoskeletal motor activity. Predicted to be part of myosin complex. Orthologous to human CCDC102A (coiled-coil domain containing 102A).

NR:

description
PREDICTED: coiled-coil domain-containing protein 102A

GO: NA

KEGG:

id description
K16759 CCDC102; coiled-coil domain-containing protein 102

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039795656.1 True 4258 mRNA 0.51 9 6847479 6901349

Neighbor

gene id symbol gene type direction distance location
nadsyn1 nadsyn1 coding downstream 217191 6598675 ~ 6630288 (-)
LOC120555473 NA coding downstream 338785 6506363 ~ 6508694 (-)
pcsk6 pcsk6,LOC108237842 coding downstream 365469 6454631 ~ 6482010 (-)
plekho2 plekho2,LOC102775773 coding downstream 468401 6347189 ~ 6379078 (-)
znf414 NA coding downstream 525912 6315510 ~ 6321567 (-)
LOC120556364 NA coding upstream 68929 6970278 ~ 6982361 (-)
LOC120556367 LOC104932139,LOC100695351,LOC108237907,LOC102197162,LOC103129685,LOC106520888,LOC101465514,LOC103366349,LOC102224277 coding upstream 104493 7005842 ~ 7023172 (-)
hdgfl3 LOC103366351,LOC102309090,LOC101465811,LOC100694012,LOC106907470 coding upstream 127217 7028566 ~ 7042141 (-)
LOC120555919 NA coding upstream 144504 7045853 ~ 7052477 (-)
LOC120555843 LOC104937892 coding upstream 402735 7304084 ~ 7306330 (-)
G25877 NA non-coding downstream 1423 6845813 ~ 6846056 (-)
G25875 NA non-coding downstream 58852 6788342 ~ 6788627 (-)
G25874 NA non-coding downstream 108465 6699432 ~ 6739014 (-)
G25851 NA non-coding downstream 205493 6641670 ~ 6641986 (-)
G25848 NA non-coding downstream 209117 6636248 ~ 6638362 (-)
LOC120556213 NA non-coding upstream 5 6901354 ~ 6963722 (-)
G25907 NA non-coding upstream 8901 6910250 ~ 6922001 (-)
G25910 NA non-coding upstream 99814 7001163 ~ 7005653 (-)
G25920 NA non-coding upstream 153047 7054396 ~ 7054600 (-)
G25922 NA non-coding upstream 176858 7078207 ~ 7078433 (-)
dok4 dok4,LOC102198948,LOC100694825,LOC102775855 other downstream 154148 6642164 ~ 6693331 (-)
tpcn2 tpcn2 other downstream 256840 6534042 ~ 6590639 (-)
pop4 pop4,LOC105418436,LOC104960843 other downstream 323124 6509259 ~ 6524355 (-)
ankdd1a ankdd1a other downstream 500918 6323277 ~ 6346561 (-)
LOC120555534 LOC103369663 other downstream 679950 6156222 ~ 6167529 (-)
lmnl3 LOC104943683 other upstream 429359 7330708 ~ 7344756 (-)
G26071 mex3b other upstream 1242858 8144207 ~ 8146901 (-)
LOC120555934 NA other upstream 1593004 8494353 ~ 8496635 (-)
il16 LOC102796330 other upstream 1729259 8630608 ~ 8697622 (-)
tlnrd1 mesdc1 other upstream 1832070 8733419 ~ 8758808 (-)

Expression


Co-expression Network