ndufs3 (ndufs3)


Basic Information

Item Value
gene id ndufs3
gene name ndufs3
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 40929470 ~ 40934556 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039795681.1
ACTTCTCCTCCGGTCCATCAGGAGGCGACAGCCCGCCAACAGTCGCGTCTCTGCCCGAAGAAAAACGactgtagaaaaaaaacatggcgGCGTCGTTGGTGCGGTTTGTCCGCGGAGGTCTTGGAAGGAGTTATAACCTTGCAAGGAGTTCGTGTCTCCTCCAGCAGCAGACCAGGCTGCAGAGCGCCACCACCGAGACCAGCCCCACCATCCGGCCCAAGGATGCTGTCACTCAGAGCCAGCTGGCAGCATTCGGGGAGTACGTGGCTGAGATGATGCCCAAATATATCCAGCAGGTCCAGgtgacCTGTTATAACGAGCTGGAGGTGATGATCCATCCTGACGGAGTGATCCCTGTCCTGACCTTCCTGAGGGATCACACCAACGGCCAGTTCAGGAACATGATTGATCTGACAGCTGTGGACGTCCCGACACGGCCGAACCGCTTTGAGGttGTGTACTCACCTGCTGTCGCGGCTTACCCTCGTCTCCGCCTTAAGACGTACACAGATGAGTTAACACCGGTGGACTCTGCAGTCCCGGTCCACATGGCCGCCAACTGGTACGAGAGGGAGGTATGGGACATGTTTGGCGTGTACTTTGCCAACCACCCAGACCTGAGGCGTATTCTGACAGACTACGGCTTCGAGGGTCACCCCTTCAGGAAGGACTTCCCTCTCTCAGGATACGTAGAGGTGCGTTATGATGATGAGGTGAAGCGTGTCGTGGCGGAGCCTGTGGAGCTGTCGCAGGAGTTCAGGAAGTTTGACCTGAACACGCCCTGGGAGGTGTTCCCCGCCTACCGAGAGCCCAAAGAGGCCGCACCCAAACTGGAGGCTGGAGACGCCGCCCCTGAGAAGAAATGACGTCCCTCTGTATCATCACCATGTTCTGTCTGTTAGTGTCGTTTTGGAACTCCTAGCATCCTGAACAAAACCCACTTAgaatatttatgtaaataaaaatactaataaaacAATCTTCAAAAGGA

Function

symbol description
ndufs3 Predicted to enable NADH dehydrogenase (ubiquinone) activity. Predicted to be part of mitochondrial respiratory chain complex I. Is expressed in male organism. Human ortholog(s) of this gene implicated in nuclear type mitochondrial complex I deficiency 8. Orthologous to human NDUFS3 (NADH:ubiquinone oxidoreductase core subunit S3).

NR:

description
PREDICTED: NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial

GO:

id name namespace
GO:0035335 peptidyl-tyrosine dephosphorylation biological_process
GO:0055114 oxidation-reduction process biological_process
GO:0008137 NADH dehydrogenase (ubiquinone) activity molecular_function
GO:0008138 protein tyrosine/serine/threonine phosphatase activity molecular_function
GO:0004725 protein tyrosine phosphatase activity molecular_function

KEGG:

id description
K03936 NDUFS3; NADH dehydrogenase (ubiquinone) Fe-S protein 3

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039795681.1 True 991 mRNA 0.55 7 40929470 40934556

Neighbor

gene id symbol gene type direction distance location
LOC120556279 atp6v0d1,LOC103462946,LOC107563463 coding downstream 247113 40672915 ~ 40682357 (-)
foxr1 NA coding downstream 257868 40666272 ~ 40671602 (-)
LOC120556133 NA coding downstream 276719 40648347 ~ 40652751 (-)
LOC120556376 NA coding downstream 298345 40598769 ~ 40631125 (-)
LOC120556512 glg1,LOC100701703,LOC101472041,LOC108242135 coding downstream 513407 40386097 ~ 40416063 (-)
ptpmt1 ptpmt1,LOC102795413 coding upstream 3259 40937815 ~ 40948565 (-)
prc1b prc1,LOC102796011 coding upstream 18359 40952915 ~ 40973681 (-)
vps33b vps33b coding upstream 40234 40974790 ~ 40998777 (-)
hypk hypk coding upstream 80913 41015469 ~ 41018907 (-)
adamtsl5 adamtsl5 coding upstream 128484 41063040 ~ 41115545 (-)
G33168 NA non-coding downstream 4416 40920334 ~ 40925054 (-)
G33167 c1qtnf4,LOC102794664 non-coding downstream 10886 40918227 ~ 40918584 (-)
G33109 NA non-coding downstream 365539 40562192 ~ 40563931 (-)
G33061 NA non-coding downstream 534767 40281473 ~ 40394703 (-)
G33068 NA non-coding downstream 594523 40331750 ~ 40334947 (-)
G33196 NA non-coding upstream 2285 40936841 ~ 40937064 (-)
G33347 NA non-coding upstream 510973 41445529 ~ 41445742 (-)
G33368 NA non-coding upstream 626276 41560832 ~ 41565475 (-)
G33369 NA non-coding upstream 631659 41566215 ~ 41566420 (-)
G33371 znf408,LOC104941494 non-coding upstream 636446 41571002 ~ 41571236 (-)
LOC120556513 NA other downstream 265813 40661364 ~ 40663657 (-)
G33122 NA other downstream 266849 40648676 ~ 40662621 (-)
LOC120556146 NA other downstream 339806 40564241 ~ 40589664 (-)
LOC120556511 LOC102208128,LOC101468289 other downstream 787422 40049624 ~ 40142048 (-)
slc6a5 slc6a5 other downstream 1693724 39205275 ~ 39235746 (-)
sirt3 sirt3 other upstream 823071 41757627 ~ 41764896 (-)
G33711 NA other upstream 1464735 42399291 ~ 42402136 (-)
G33796 NA other upstream 2050667 42985223 ~ 42990770 (-)
G33847 NA other upstream 2280078 43214634 ~ 43214987 (-)
G33914 NA other upstream 2518156 43452712 ~ 43456847 (-)

Expression


Co-expression Network