mcee (mcee)


Basic Information

Item Value
gene id mcee
gene name mcee
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 23012599 ~ 23014909 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039795689.1
GTGACCGTCTGTGTCGCAGGTAAATACGCTCGCCGAAAAACTCTTTCACTGTTGTTTGGTTCCGACATACAAACATGGCGTCCGCCGTGCTGAAGGTTGCAGTGGCAGGTCTTTCCAGATGTTCTCATCTCACACTCATGAGGGCACATTCAACGACATCACCCCTCCATCAGGGTGTTCCTGGATCACTGTGGAAGCTGGGGAGGCTAAACCACATTGCCATCGCTGTCCCAGACATGGAGAAGGCCACAGCTCTGTATCGGGACGTGCTGGGGGCCACAGTAAGTGACAAGGTACCCCTGCCCGAGCACGGCGTCTACACTGTGTTTGTGGAGCTCGGCAACACTAAGCTGGAGCTGCTCCATCCTCTGGGGGAGAAGAGCCCGATCGCTGGCTTCTTACAGAAGAACAAGTCTGGAGGAATGCACCACATTTGTATTGAGGTAGACGACATTAACTCTGCGATAGCCGACCTGAAAGCAAAGAACATCAGAACTCTGTCAGCAGAGCCCCGGATAGGTGCTCACGGGAAACCAGTGATGTTTCTCCATCCTAAAGACTGTGACGGTGTGCTGGTGGAGCTTGAAGAAGCATGAACATGTCAGTCTGACTAGGATTGTTGTTAATTGTTAATTCACATTTGTATATTCCACAATCAGTTTGACAacaaatgttgattttgtaaTATTGTTCTATAGCACTTAAGATTGTGCTCTTCTCATTTCAGAAATGTGCCTCAAAGTTATTCTTCCAGGTCTGTTCTTGACTTCCCTGTTGTGTTGGGAATAAATTGTATGGTGTTCAA
>XM_039795690.1
GTGACCGTCTGTGTCGCAGGTAAATACGCTCGCCGAAAAACTCTTTCACTGTTGTTTGGTTCCGACATACAAACATGGCGTCCGCCGTGCTGAAGGTTGCAGTGGCAGGTCTTTCCAGATGTTCTCATCTCACACTCATGAGGGCACATTCAACGACATCACCCCTCCATCAGGGTGTTCCTGGATCACTGTGGAAGCTGGGGAGGCTAAACCACATTGCCATCGCTGTCCCAGACATGGAGAAGGCCACAGCTCTGTATCGGGACGTGCTGGGGGCCACAGTAAGTGACAAGGTACCCCTGCCCGAGCACGGCGTCTACACTGTGTTTGTGGAGCTCGGCAACACTAAGCTGGAGCTGCTCCATCCTCTGGGGGAGAAGAGCCCGATCGCTGGCTTCTTACAGAAGAACAAGTCTGGAGGAATGCACCACATTTGTATTGAGGTAGACGACATTAACTCTGCGATAGCCGACCTGAAAGCAAAGAACATCAGAACTCTGTCAGCAGAGCCCCGGATAGGTGCTCACGGGAAACCAGTGATGTTTCTCCATCCTAAAGACTGTGACGGTGTGCTGGTGGAGCTTGAAGAAGCATGAACATAAATGTGCCTCAAAGTTATTCTTCCAGGTCTGTTCTTGACTTCCCTGTTGTGTTGGGAATAAATTGTATGGTGTTCAA

Function

symbol description
mcee Predicted to enable methylmalonyl-CoA epimerase activity. Predicted to be involved in L-methylmalonyl-CoA metabolic process. Orthologous to human MCEE (methylmalonyl-CoA epimerase).

NR:

description
methylmalonyl-CoA epimerase, mitochondrial-like isoform X1

GO: NA

KEGG:

id description
K05606 MCEE, epi; methylmalonyl-CoA/ethylmalonyl-CoA epimerase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039795689.1 True 805 mRNA 0.48 3 23012599 23014909
XM_039795690.1 False 678 mRNA 0.51 4 23012599 23014909

Neighbor

gene id symbol gene type direction distance location
LOC120555841 LOC102215785,LOC102786096,LOC101482767,LOC104919260 coding upstream 52196 22945044 ~ 22960403 (+)
sult5a1 NA coding upstream 82933 22923824 ~ 22929666 (+)
slc22a31 slc22a31 coding upstream 101321 22896342 ~ 22911278 (+)
cdh15 cdh15 coding upstream 260658 22713300 ~ 22751941 (+)
acsf3 acsf3 coding upstream 300665 22669904 ~ 22711934 (+)
mettl15 mettl15 coding downstream 90312 23105221 ~ 23158790 (+)
lgr4 lgr4 coding downstream 204280 23219189 ~ 23254585 (+)
slc39a13 slc39a13 coding downstream 313701 23328610 ~ 23343208 (+)
tmem276b LOC104919254,LOC101064922,LOC103364365,LOC104940771,LOC103378694 coding downstream 330578 23345487 ~ 23354201 (+)
LOC120556218 cilp coding downstream 535283 23550192 ~ 23568550 (+)
G29243 mphosph10 non-coding upstream 4617 23004878 ~ 23007982 (+)
G29241 ist1 non-coding upstream 11550 22997702 ~ 23001049 (+)
G29176 NA non-coding upstream 258954 22752468 ~ 22753645 (+)
G29139 NA non-coding upstream 411040 22548700 ~ 22601559 (+)
G29135 galns non-coding upstream 477731 22533942 ~ 22534868 (+)
G29228 LOC100136564,LOC104919244,LOC103365615 non-coding downstream 1123 23016032 ~ 23019378 (+)
G29262 NA non-coding downstream 6520 23021429 ~ 23024754 (+)
G29271 NA non-coding downstream 30384 23045293 ~ 23089580 (+)
G29288 NA non-coding downstream 145042 23159951 ~ 23160396 (+)
G29294 NA non-coding downstream 145684 23160593 ~ 23160917 (+)
LOC120555548 LOC103365626,LOC104942698 other upstream 18435 22981783 ~ 22994164 (+)
ankrd11 ankrd11 other upstream 117592 22764719 ~ 22895007 (+)
gpc5a gpc5,LOC103365231 other upstream 1140574 21720034 ~ 21872025 (+)
dcun1d2b dcun1d2,LOC102792160 other upstream 1408693 21596331 ~ 21603906 (+)
tpp2 tpp2 other upstream 1449785 21525592 ~ 21562814 (+)
G29292 NA other downstream 121823 23136732 ~ 23137027 (+)
igdcc3 igdcc3 other downstream 428240 23443149 ~ 23517263 (+)
G29433 NA other downstream 712103 23727012 ~ 23732471 (+)
plekha7b NA other downstream 1220814 24235723 ~ 24314645 (+)
sox6 sox6,LOC103363464 other downstream 1305155 24320064 ~ 24455688 (+)

Expression


Co-expression Network