LOC120556254 (LOC104944274)


Basic Information

Item Value
gene id LOC120556254
gene name LOC104944274
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 30489323 ~ 30491474 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039795715.1
ATATTCGCACTTCCTTCTGCCAGGAGAACGAACCTCAATCGTTGTCTGCCGACGAAAGGACTTCGCGATGaagtaaataaacagaaaataaaatgaatactaTTGAGAAGAAGCTAGCGGACTTGATACGTGAACACCCGAATTTATATGACCAATCACGTCGGGACTACAAAGACAATCTGAAGGGACATTTGTCGTGGAGAGACATCGCAGACGACATGGGAAAGTCGGAGGAGGAGGTGAAATTGAAATGGAAAAATCTACGCGACAAGTTCTGTAAGGCGAAGAAGCGAATGGCCAAGAGAAGCTTCCCTCTGCTGACAGGCGACGAGAACCTGGTGGAGAGGCCCGTCCCGGTGCTGTACCaccagctagcctggctcagcGCCTACGTCAAACCCAGAGTAGAAACTGGCAAGGGAGAGACCGACGAGGTAGCTGTAAGTGGTGAGGATGTGGAGAAAGAGCGAGATAAAGATGAGAAGGAGCAACAATGTCCCCTGCCTGTCGTTAGTACTAGCTTTTCTCTTGTGGAGTCCTGTCCAAACAATCATCAGGAGATGGGAGTCTCTCTTAAACGTAAAAGGCAAACCACCACAGAAACTGAGATAAGCTCTGCAGATGCCCTGACCAACCTCAGAGATGAAGATGAACTGTTTCTGCTCAGCCTTCTGCCTTCACTGAAGAGGCTtaccattaaaaaaagaatggagGTACGGATGAAATTCCAGCAAGTGCTTTATGCTGCAGAGTTTGAGGACTAAAGGACTCATTAAAAGGCAATACAAATTGTATGATCAGTGTTAGTTGCTTTTGGAATAATTCTTCAAGCATTCAATCCTGTAAACAGATTTTTTAAAAACCATTATaactttaatatttatttttggatCGCCACTGctattaaaaatatcaatatgtAGATGTCTCTAA

Function

NR:

description
PREDICTED: uncharacterized protein LOC104944274

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039795715.1 True 933 mRNA 0.44 2 30489323 30491474

Neighbor

gene id symbol gene type direction distance location
rufy2 rufy2,LOC102778539 coding downstream 1339 30457240 ~ 30487984 (-)
LOC120556252 pbld coding downstream 42663 30442247 ~ 30446660 (-)
tacr2 tacr2,LOC103373147 coding downstream 128091 30353428 ~ 30361232 (-)
ddx21 ddx21,LOC102783051 coding downstream 310709 30166818 ~ 30178614 (-)
rnaset2 rnaset2,LOC103368766,LOC104927783 coding downstream 936850 29541607 ~ 29552473 (-)
mis12 mis12 coding upstream 75316 30566790 ~ 30568574 (-)
rhoua rhou,LOC108237402,LOC107381884 coding upstream 115173 30606647 ~ 30610958 (-)
LOC120555751 tbp coding upstream 127383 30618857 ~ 30627325 (-)
psmb1 psmb1 coding upstream 140237 30631711 ~ 30634639 (-)
phf10 phf10 coding upstream 143699 30635173 ~ 30646025 (-)
G31027 LOC104955499,LOC103375803 non-coding downstream 65000 30421690 ~ 30424323 (-)
G31024 NA non-coding downstream 79267 30408105 ~ 30410056 (-)
G31013 hk1,LOC101156878,LOC107381906,LOC106513162,LOC102780719 non-coding downstream 145421 30343416 ~ 30343902 (-)
G30969 NA non-coding downstream 200890 30162480 ~ 30288433 (-)
G30905 NA non-coding downstream 827235 29661668 ~ 29662088 (-)
G31110 NA non-coding upstream 78413 30569887 ~ 30585456 (-)
G31115 NA non-coding upstream 86812 30578286 ~ 30579304 (-)
G31146 NA non-coding upstream 207929 30699403 ~ 30726354 (-)
G31150 NA non-coding upstream 278109 30769583 ~ 30769809 (-)
G31155 NA non-coding upstream 290936 30782410 ~ 30785228 (-)
LOC120556497 csmd1,LOC102783723 other downstream 523576 29617320 ~ 29965747 (-)
elp4 elp4,LOC103373817 other downstream 1028087 29402035 ~ 29461236 (-)
prrg4 NA other downstream 1174614 29310550 ~ 29314709 (-)
LOC120555471 hipk3 other downstream 1220140 29217853 ~ 29269183 (-)
mafa maf,LOC101477682,LOC100702616,LOC102790406,LOC102298902,LOC104927625,LOC102192535,LOC105919746 other downstream 1642358 28770001 ~ 28846965 (-)
fam120b fam120b,LOC104944276 other upstream 23781 30515255 ~ 30532142 (-)
cdc42se2 cdc42se2,LOC103398548 other upstream 1617098 32108572 ~ 32117250 (-)
G31602 ddx28,LOC106597432 other upstream 2400025 32891499 ~ 32894405 (-)
wdr76 frmd5,LOC103354945,LOC103374291 other upstream 2850773 33342247 ~ 33353448 (-)
znf710b LOC104936257,LOC102799163,LOC101477128 other upstream 2945337 33436811 ~ 33471335 (-)

Expression


Co-expression Network