LOC120556278


Basic Information

Item Value
gene id LOC120556278
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 46324410 ~ 46329576 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039795757.1
cagacagagacacagagacagacagagacacagagacacagcgcGGCAGCAACAgGATGTTTGTGTCGGCGCTGCTCTGCTGTTTCTCCTTCAGTCTGCTGCATCTCTCTTCTTCGTTGGTTCCTGGAAACCTCCAGCTGGACGACGGTGCGCTTGCCGGTCGCCGCGGCGACGTCGCGTACCTGTCAGACCTGGAGAGAAGCCACGCCCCCGACCAGCTGCGTGACTCCGCCCTCCTTCCTGTCGACTCAGCGGAGGATCGCTTCCTGATGGACGCGGCCTCCTATGACgagGACCTGTCTGCGGCGCTGCAGCTCCAGGGGCGAGCCCTGCGTTCCCCTCGCCGCTGCGTGCCCCACCAGCAGTCCTGTCTGGGCTTCCCGCTGCCCTGCTGCGACGCATGTGACACCTGCTACTGCCGCTTCTTCAACGCCATCTGCTACTGCGCGCCCCCGCACGCCTGCCCCCCCCGGCGCACCTga

Function

GO:

id name namespace
GO:0007218 neuropeptide signaling pathway biological_process
GO:0048589 developmental growth biological_process
GO:0040008 regulation of growth biological_process
GO:0009755 hormone-mediated signaling pathway biological_process
GO:0005576 extracellular region cellular_component
GO:0005184 neuropeptide hormone activity molecular_function

KEGG:

id description
K05231 AGRP; agouti related protein

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039795757.1 True 482 mRNA 0.65 5 46324410 46329576

Neighbor

gene id symbol gene type direction distance location
LOC120555950 NA coding downstream 181146 46128800 ~ 46143264 (-)
LOC120556539 NA coding downstream 198714 46117224 ~ 46125696 (-)
LOC120555463 NA coding downstream 519779 45803287 ~ 45804631 (-)
LOC120555462 NA coding downstream 535707 45786996 ~ 45788703 (-)
LOC120555455 NA coding downstream 612303 45709732 ~ 45712107 (-)
LOC120556031 LOC103372833 coding upstream 6718 46336294 ~ 46342517 (-)
LOC120555469 NA coding upstream 98537 46428113 ~ 46469487 (-)
tppp3 tppp3,LOC102289613,LOC100709027 coding upstream 250073 46579649 ~ 46586118 (-)
hsd11b2 NA coding upstream 316757 46646333 ~ 46692686 (-)
G34705 NA non-coding downstream 1833 46322304 ~ 46322577 (-)
G34694 NA non-coding downstream 74836 46249236 ~ 46249574 (-)
G34664 NA non-coding downstream 218823 45957100 ~ 46105587 (-)
G34691 NA non-coding downstream 219946 46104070 ~ 46104464 (-)
G34669 NA non-coding downstream 261317 45993618 ~ 46063093 (-)
G34716 NA non-coding upstream 18297 46347873 ~ 46348282 (-)
G34717 NA non-coding upstream 19314 46348890 ~ 46349257 (-)
G34725 NA non-coding upstream 38817 46368393 ~ 46451340 (-)
G34792 NA non-coding upstream 177696 46507272 ~ 46530575 (-)
G34793 NA non-coding upstream 180675 46510251 ~ 46564157 (-)
vps13c vps13c other downstream 7386 46199704 ~ 46317024 (-)
LOC120555951 LOC104934393,LOC103372831 other downstream 140108 46144984 ~ 46184302 (-)
G34594 NA other downstream 466932 45854640 ~ 45857478 (-)
G34584 LOC108242767,LOC105923784,LOC108242778 other downstream 554622 45759488 ~ 45769788 (-)
G34617 NA other downstream 740743 45582497 ~ 45583667 (-)
G34718 NA other upstream 25943 46355519 ~ 46356020 (-)
G34812 NA other upstream 257479 46587055 ~ 46588046 (-)
zdhhc1 zdhhc1,LOC106532171,LOC107755028 other upstream 265396 46594972 ~ 46618637 (-)
LOC120556544 LOC106905454,LOC104943346,LOC107096264,LOC106938658 other upstream 485719 46815295 ~ 46823733 (-)

Expression


Co-expression Network