LOC120556290 (LOC102076597,LOC103462686,LOC102304084,LOC106922154,LOC106961725,LOC106587172,LOC107081502)


Basic Information

Item Value
gene id LOC120556290
gene name LOC102076597,LOC103462686,LOC102304084,LOC106922154,LOC106961725,LOC106587172,LOC107081502
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 34964948 ~ 34969625 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039795774.1
TTAGCTGTTGCCAATGTGTTCACAACGGTGGACCCTCTTTTGGGCTTTTTACAGCGATTGTCTTCATTTTTCGCTCAATCTAGTATGGAAAGTAGACAACAATGGCTTACCAGGCTGAAAAATGAACTTAGCAACAGTCCTCTGGTATCAAATGTGGCTTTTGGCTTTATCCTCATGGGACTAGAGAAGCTGGTGGAGCTGGAGTTTGAGTGTCCTTGCAACCCTACATGGAACGGAGTATTTTCATCAGCATTCTTCATAATTCCTGCCGTCATGGCCTTCACCTTGATGCTGATCATTCAAGGATGCAGATGTGATATGTGGTGCCGGAAACCTGTTACCCTCTCCAGTTTCGTTCCTGCTATCGTGTGGCTGATTTTGTTGTTCCTCGATGGCCAATACTTTGCTTGTGCTATGACAGACTGGGAGGGTAGATTTGTACTAGTTGACAAGGCAGCTCCGCAGAAGTGGTGTGAGCCAATTAGTGAGGGAGATGTCACCCCACAAGAGCTAATGCTCCGCTCACagcagctgtttgttttttctcagGTTATAGGCATAATCCTGCTCATTTTCATCTGTGTGGGTCTCGTAGTGTATGTAATCAGAGAAAGCTGCGAACAAGAGGTGGAGATGGAGGATGCAGATGTAGCCGAGCTCACTGTGCTCAGGATGAGTTCTCTGCGGACCAGGACATCGTGAGAGGACTTACACCGCCCACCACACCTGCCCTGCTGGCATGGACACTTTGTAAATACCCTGAACagactttactatgacttttatataaCTATTGTCAATAAGTGTTGTTTCAAAGTATTTCCCTAAACTAATTGGACATAGGTCTGTGAATGGGCAGTGATGCTGCCCTATGAAGTTTCCGTAAATATGAGTATTATTGAGAACagtctttctattttttttctgtattaccATTGAAAATGTAACCAGTCTTGTGTCTGTGTTCAACTCATACTTGTGCAGCGACTTATTCCTTTTTACCTGTCTTCTAAGGAATAGTTTGATGTTTTGGGGAAATATGCTTGTTTGCTTTTTGGGTTAGaggagaagatcgataccactcttcagtaaatatgaagctacagacagcagccggttagcttagtttagcatggaAGGACTGGAAATAGGGGGAAACAGCCAGCCTGGCTCAGTCCAAAGGTAACACAATGCTTGCTAGCACCTCTAAAGGTCACTAATTCATCCGTTATATCTCGTAAGTTTGAGCCGTACAAGTGTAAAAACAATCATTTGCTTTTTGACAAGGGGTTATgtgctggactatttcttgCATGAGagcagttgccaggcaaccagtggaGACTCTAGGAAATTACTGCAAGAAATAGTCCGGCATATAACCCTCTATAAAACAGGGAATTATATTGTTCCCCCTATTTGCATGCATTATGCCATCTGACCGGCTGCTGACTCCAGTTTCATATTTACCGGACAGACATaggagtggtattgatcttcccATCTAAGTCTCagtaagaaagcaaataagcatatttcccaaaatgtcaaactattcattTAAAGTGATATTTCACTTTGGCACATTTTATGTGTTTATTCGACATGAATTGTGAGCCAGCAGCTCTGAGAAACTCAGTTAGTACTGCTCTCTCCCTTTCAACTTTTTATTCCTTGAAAATagcatttcagtttttttaatctGAAAGTTTTTTCGTGCCTTTTGTATTAGTTTTATTCACACAAGTGGAATCCACCAGGCAGCTAATATTGATCTGACTAATATTAGTTGACTTGTACTATTGTTTGAGATGTGTGtgccaaaaatgaaaatgttccaTCAAGGTGAAATTTCacttaaaataattttgttttccCTCCTGGGTTGTGTCAAGGAGTCTCCAGAGTTATGGAGGGTCGGACCCCCGTCATTTCTAATCCTACCTAACAGTGACGATTCAGACTGAATTGATATTCCTAATGATTTACCTGTTTGACAGCTAGAGATGTAAAATCATGTACATTTTGATTTGTATCATGGCTGCAACCAGCCAATAGCAGCATGTAGAAACAAATTCTGTAACAGAATCTGCAGtaagttttttattattattttgtaataaaagaatttatttatttaagaaaaacCCTCAGGGATTTTGTACAGTCATGTCATAATAGCATTTAGTTAGCAGATAGTTTCCACAAACCTGCAGTCTTGGGAATTTGAGTTTGTCTTAAAGTGTGGTAGGTTTTACTGTAACATCTCTATAGCAAGTGAATTTTACAAATACCAATACACTGTGGGACAGAACATGATCATTTGAATTACAAATACTGTGGTTTtgtcattcaaagcaacacatggTAACATTTGGAATATCCTTTCAACTTTGGGCTTATATTAAATGCCAGACATCCAATACCTTAACACAGCTGAAACAGGGGCCCTttgcaaaaaaaagaacagcTGAATAATCAGTGTAACACATGCTACAAATAGCATATCTTACAGGTGAATGCAAAGACTGTCTGTAGATTCTCAGGTGAACAACACTTTTGTGTCTTAGGACACTCTTTATTCAGAACTTCAGGGACTGTGGTTTTGAGGCTGTATTGGCTGATCTCTGCAGCCTGGATATTCTGTACAGGTCTGCCAAAACCAACACATACAGCAGTAGTGTAGCTCTGACTTGTATTGTAGTTATTTACAACATTGCCTAAGTGCCAGTTAAGCCCATTAAGTGTGGAAATCAGGGCAGACCCTTCATGTTTATCATGTGGGAGGGCTTATTCAGGACTTCCTGTTTGGCCCTGAGGAAGTTGTTGTCTTTATCCACTCTACTCCCCTAACTTGTAGACACAGCAGGGCATCATATTAATGACCAAAACTGGGACTCAGTGGAGTCTTGaattacttttctttctttcatgaGCAATGAACTGTTTGGATGACCTTGACGGTAAATTGTTCTTGCTCAGATTATCCGGCCTATCACTCTTATGACTCCCAGAGGTAATTTGGCAAATGCTGCAAGTAGCTCAATTTTTTTGTACCATGAATTTCACCTACAAAAGTCACCAGAGACATATCCACATTCAATAATTAAGGGACAGCTACAGGGGCAATGGGAGAGGGAGACTTAAGCACAACAGCAACTTTCCAAAGCCATAGATCCTATATTACGTACGAGCCTTCAGGTCCAAAGTATTCATCACAAATAACATGCAACTGTTGTTTGGCAAAGAACTCACCTTCAGCTTTTAATTCAATTAAGAGCATTCTTAAAAGCAAACCTGAGCCAGGTGTTCCTTAGTTACGTAAAGGCAAAGAGGGCTGCATTTTCTCACACGTTAAGTACAAATCATAATGCTTACTGTCTTTCACACTATTAATGAAGTTGAAGTTTATGTTCACATAAAGGCATAAAGACAGTCAAACAGGCCTGAGaaatatcaaaagtaaaatTGTTCATGTGGTGTGCATGCCACTCCAGAACATTGCTAGAAGAAACCAGAAATACTGTATTAGTTAATAGCATTCAAAATCACTTGatgtctttatttttaaaatgttacatccatgttgaaaaagtcattcTAAGAATTGTTGGTGTGTATTATCTAAGCATAGTGATTTCTAAAATGAAATCTCTAAGCCAGGTGATCAAACTAAAATGAGAGAGGCTTCTCGTCAACACTGGAATTAATGTAATTGCATGCATTGTATGAAAAACCGAGATTGTAAAGATCCTACTGTAAAAACACATTGAGGCTTATACAAAGAAAGGATTGATGCATATAAGGGCCTAGTATAGCTCTGGTGTCTCACTTTAATCTTCAAGTGTGAAATTGAATCTGTTTAAATCTATACAAGCCTACACTTTGCTTGGAAGCTGTAAGAACATGTATCACCAATACTGTGCAACACAGGAAAGTATGTAgtagtttaaaaatgtaaaatatattgtCCTACAGTGTAAGAGTGAATTTGAAAAGTCTTGAAAATCAGTGAAGCTAAGAGATAAAAGCAAATGCATGCAAAGGTTATTTCCACTGTGGGCTAATTAAAGACCAACTCATGAACAGTATAATTtataaatgcttttattttcttccCTCGAATACAGCAATGTTACTGTACATTTTGGTAACCCTTTCTCCTAAAGGTTAACGTTGTTTCCATGTGTACTCTGATCTAAGTTTGCAGATATCTAGGGCCACATATTCAAAGAGTATTGATTGGTTGATGTGAAACCCTGACTAGATGTTTCAAAATAATGTATTTGCCAACCTGCATAGACAAATTGCATAAAGGTATGACATGTTTGTTTATCCAGAGTATGGGGTTGGTGAAATAACAATACTGTAAGAATATGGTGAAAACTAAATATAATCAGCCTTAAACATGTGTTCTTCCGTATTGATGAAATAAAGAATTATAAAGCACCGAA

Function

NR:

description
PREDICTED: protein FAM26F

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039795774.1 True 4454 mRNA 0.39 2 34964948 34969625

Neighbor

gene id symbol gene type direction distance location
chrna5 NA coding downstream 9871 34942334 ~ 34955077 (-)
LOC120556551 LOC103358809,LOC104958159 coding downstream 24043 34937904 ~ 34940905 (-)
LOC120555974 LOC105015542,LOC106562136,LOC107661444,LOC101477331 coding downstream 84799 34867832 ~ 34880149 (-)
zgc:158464 shf coding downstream 148937 34712703 ~ 34816011 (-)
cd276 cd276 coding downstream 267283 34617056 ~ 34697665 (-)
pkma pkm,LOC101466927,LOC102785629,LOC105930156,LOC107381266 coding upstream 169838 35139463 ~ 35159533 (-)
slc12a4 slc12a4 coding upstream 473204 35442829 ~ 35468809 (-)
slc6a2 slc6a2 coding upstream 519455 35489080 ~ 35523483 (-)
lpcat2 lpcat2 coding upstream 562323 35531948 ~ 35544685 (-)
mmp2 mmp2 coding upstream 575919 35545544 ~ 35562094 (-)
G31994 NA non-coding downstream 97430 34864877 ~ 34867518 (-)
G31907 NA non-coding downstream 677163 34287210 ~ 34287785 (-)
G31906 NA non-coding downstream 677868 34286288 ~ 34287080 (-)
G31881 NA non-coding downstream 784454 34179905 ~ 34180494 (-)
G31862 NA non-coding downstream 1108782 33855898 ~ 33856166 (-)
G32060 LOC103373785,LOC104925039 non-coding upstream 23832 34993457 ~ 35003451 (-)
G32070 NA non-coding upstream 100742 35070367 ~ 35070891 (-)
G32072 NA non-coding upstream 132315 35101940 ~ 35183773 (-)
G32077 LOC102786496,LOC102306459 non-coding upstream 165114 35134739 ~ 35135710 (-)
G32153 NA non-coding upstream 656906 35626531 ~ 35700759 (-)
G31955 NA other downstream 365407 34490660 ~ 34599541 (-)
LOC120555494 arpp19,LOC101481874,LOC103358163 other downstream 1148560 33806918 ~ 33816388 (-)
serf2 NA other downstream 1395569 33566371 ~ 33569379 (-)
znf710b LOC104936257,LOC102799163,LOC101477128 other downstream 1493613 33436811 ~ 33471335 (-)
wdr76 frmd5,LOC103354945,LOC103374291 other downstream 1611500 33342247 ~ 33353448 (-)
cylda cyld other upstream 1889922 36859547 ~ 36882795 (-)
nod2 nod2 other upstream 1914026 36883651 ~ 36891304 (-)
ss18l2 ss18l2 other upstream 2261516 37231141 ~ 37253426 (-)
LOC120556344 lrrc49,LOC102795887 other upstream 2819100 37788725 ~ 37827271 (-)
slc6a5 slc6a5 other upstream 4235650 39205275 ~ 39235746 (-)

Expression


Co-expression Network