LOC120556297 (LOC103353194,LOC104949848)


Basic Information

Item Value
gene id LOC120556297
gene name LOC103353194,LOC104949848
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 17173886 ~ 17185740 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039795779.1
accctgaacacaccacagtCTCAGCGGCAGGCGGGCCATTCTTCAGCTTCTCCTTCGCTTTTGGCACCAATGTCggaggtgtttgtttgtgcctGGAAGAAATGGACTCTGGCAATGCACGAATttgatcattcagagatccgaTCAGTTGAGTCTGTGAATGGCGCCAAAACAGGACCCTAAACCTAAATTTCAAGAAGGTGAAAGAGTCCTGTGCTTTCATGGGCCATTGCTCTATGAGGCAAAGTGCGTAAAGATCAACATAAAGGATAAACTGATTAAATACTTCATTCATTACAGCGGATGGAACAAAAACTGGGATGAATGGGTTCCTGAAAGCAGAGTTCTCAAATATGTGGACAGCAACCTTGCGAAACAAAAAGAGCTTCAGAAGGCCAATCAGGACCATTATGTTGAGGGAAAGATGAGGGGTTTAGCACCAAGCAAGAAGATTGCTGCTGTGCAGCAGAAAAATGTTGATCTGAAAGTGAAAAAGGCAAAGCAGAAGACCCCAGGGCCGGGTGAAGGCACCAGCAGCGGAGAAACGCCGCAGGGGCCGCGGAAGAAAAGGGCTCGGGTCGATCCCACTGTGGAGAGTGAGGAGATGTTCACCAATCGGGTAGAGGTGAAGGTAAAGATCCCTGAAGAGCTGAAACCCTGGCTGGTGGACGACTGGGACCTCATCACCCGACAGAAACAGTTATTTCATCTGCCTGCTAAGAAGAATATAGAGACCGTCTTGGAGGACTATGCAAACTATAAGAAATCAAAAGCAAACTCTGACAATAACAGGGAGTTTGCGGTAAACGAAGTGGTAGCAGGGATTCGGGAGTACTTCAACGTCATGCTAGGCACCCAGCTGCTTTACAAGTTTGAGAGGCCCCAGTATGCTGAGATCATGGCTGAACACCCAGACATGCCAATGTCTCAGGTGTACGGAGCTCCGCACTTGCTACGCCTTTTTGtTCGTATTGGAGCCATGCTGGCCTACACTCCACTGGACGAGAAGAGTCTGGCTTTGCTGCTTAGTTACCTCCAAGATTTCCTCAAGTACCTGGTGAAGAATTCCTCCACCCTCTTGAGTGCCACTGATTACGAGGTCGCGCCCCCAGAGTACCACCGCAAGGCTGTCTGAGAGCTCTCCGGCACCTCTCCCACACCACATGTACTGTAAAATAACCATTACTACCCGAGTGCAAACTCGGATGAGATTTTTCACTTCAACTGATAAACTTTCACAAAGGTCTCAGGAGCTTGTCACAGTTAAGaagttcaacaacaacaacacatttaggaaacctttttTTATGCTgactcctcttttctctccctttttcctttttatttctcaCTTCTttgaaaagacacaaaaaaatgattttccgTCGACAAGTTTCCACAAGCAgctgtttggtgtttttgtgcATTCCACCTGATAGATATTTGTTACTGTTGCATGTTTGTATTTATTAGTGTTTCTTCTGCCACATGAGGTGCAATTTATTGCTGGACCACAAGGTCAGCACTCAGCAGTTGATGTTTTTGTATCCGTAtcgtttttgtatttgtatcaatttgtaaaaaaaaaaaaaaatgtttctacacAATCTC
>XM_039795781.1
accctgaacacaccacagtCTCAGCGGCAGGCGGGCCATTCTTCAGCTTCTCCTTCGCTTTTGGCACCAATGTCggaggtgtttgtttgtgcctGGAAGAAATGGACTCTGGCAATGCACGAATttgatcattcagagatccgaTCAGTTGAGTCTGTGAATGGCGCCAAAACAGGACCCTAAACCTAAATTTCAAGAAGGTGAAAGAGTCCTGTGCTTTCATGGGCCATTGCTCTATGAGGCAAAGTGCGTAAAGATCAACATAAAGGATAAACTGATTAAATACTTCATTCATTACAGCGGATGGAACAAAAACTGGGATGAATGGGTTCCTGAAAGCAGAGTTCTCAAATATGTGGACAGCAACCTTGCGAAACAAAAAGAGCTTCAGAAGGCCAATCAGGACCATTATGTTGAGGGAAAGATGAGGGGTTTAGCACCAAGCAAGAAGATTGCTGCTGTGCAGCAGAAAAATGTTGATCTGAAAGTGAAAAAGGCAAAGCAGAAGACCCCAGGGCCGGGTGAAGGCACCAGCAGCGGAGAAACGCCGCAGGGGCCGCGGAAGAAAAGGGCTCGGGTCGATCCCACTGTGGAGAGTGAGGAGATGTTCACCAATCGGGTAGAGGTGAAGGTAAAGATCCCTGAAGAGCTGAAACCCTGGCTGGTGGACGACTGGGACCTCATCACCCGACAGAAACAGTTATTTCATCTGCCTGCTAAGAAGAATATAGAGACCGTCTTGGAGGACTATGCAAACTATAAGAAATCAAAAGCAAACTCTGACAATAAGGAGTTTGCGGTAAACGAAGTGGTAGCAGGGATTCGGGAGTACTTCAACGTCATGCTAGGCACCCAGCTGCTTTACAAGTTTGAGAGGCCCCAGTATGCTGAGATCATGGCTGAACACCCAGACATGCCAATGTCTCAGGTGTACGGAGCTCCGCACTTGCTACGCCTTTTTGtTCGTATTGGAGCCATGCTGGCCTACACTCCACTGGACGAGAAGAGTCTGGCTTTGCTGCTTAGTTACCTCCAAGATTTCCTCAAGTACCTGGTGAAGAATTCCTCCACCCTCTTGAGTGCCACTGATTACGAGGTCGCGCCCCCAGAGTACCACCGCAAGGCTGTCTGAGAGCTCTCCGGCACCTCTCCCACACCACATGTACTGTAAAATAACCATTACTACCCGAGTGCAAACTCGGATGAGATTTTTCACTTCAACTGATAAACTTTCACAAAGGTCTCAGGAGCTTGTCACAGTTAAGaagttcaacaacaacaacacatttaggaaacctttttTTATGCTgactcctcttttctctccctttttcctttttatttctcaCTTCTttgaaaagacacaaaaaaatgattttccgTCGACAAGTTTCCACAAGCAgctgtttggtgtttttgtgcATTCCACCTGATAGATATTTGTTACTGTTGCATGTTTGTATTTATTAGTGTTTCTTCTGCCACATGAGGTGCAATTTATTGCTGGACCACAAGGTCAGCACTCAGCAGTTGATGTTTTTGTATCCGTAtcgtttttgtatttgtatcaatttgtaaaaaaaaaaaaaaatgtttctacacAATCTC
>XM_039795782.1
GGCTGCTCTAGCTCGACAATAGTATTCTCCAGAGAGGCAAAAAGAGCTACAGAGCCTTTATTATTGGCCAAATATGTGGGGAATTCATTTAAAGCATAACGTTAACCAAAATTGACACATATTAAAGCGTAGCACCTTAACATGAAGCTGAAGGTGTAAAACAAACGTTAACGCCAGGCTAACGGCTAGCTAGCTTGTAATTGTATGCTATATACGAGCTAAACCTTAATTTACAGCCACTGACACACAAAATAGTCGCTAAAACCATGTCAGTATGGTTCAAAATCGATCTGAGGAACTCCATGGTGAAAGAGTCCTGTGCTTTCATGGGCCATTGCTCTATGAGGCAAAGTGCGTAAAGATCAACATAAAGGATAAACTGATTAAATACTTCATTCATTACAGCGGATGGAACAAAAACTGGGATGAATGGGTTCCTGAAAGCAGAGTTCTCAAATATGTGGACAGCAACCTTGCGAAACAAAAAGAGCTTCAGAAGGCCAATCAGGACCATTATGTTGAGGGAAAGATGAGGGGTTTAGCACCAAGCAAGAAGATTGCTGCTGTGCAGCAGAAAAATGTTGATCTGAAAGTGAAAAAGGCAAAGCAGAAGACCCCAGGGCCGGGTGAAGGCACCAGCAGCGGAGAAACGCCGCAGGGGCCGCGGAAGAAAAGGGCTCGGGTCGATCCCACTGTGGAGAGTGAGGAGATGTTCACCAATCGGGTAGAGGTGAAGGTAAAGATCCCTGAAGAGCTGAAACCCTGGCTGGTGGACGACTGGGACCTCATCACCCGACAGAAACAGTTATTTCATCTGCCTGCTAAGAAGAATATAGAGACCGTCTTGGAGGACTATGCAAACTATAAGAAATCAAAAGCAAACTCTGACAATAACAGGGAGTTTGCGGTAAACGAAGTGGTAGCAGGGATTCGGGAGTACTTCAACGTCATGCTAGGCACCCAGCTGCTTTACAAGTTTGAGAGGCCCCAGTATGCTGAGATCATGGCTGAACACCCAGACATGCCAATGTCTCAGGTGTACGGAGCTCCGCACTTGCTACGCCTTTTTGtTCGTATTGGAGCCATGCTGGCCTACACTCCACTGGACGAGAAGAGTCTGGCTTTGCTGCTTAGTTACCTCCAAGATTTCCTCAAGTACCTGGTGAAGAATTCCTCCACCCTCTTGAGTGCCACTGATTACGAGGTCGCGCCCCCAGAGTACCACCGCAAGGCTGTCTGAGAGCTCTCCGGCACCTCTCCCACACCACATGTACTGTAAAATAACCATTACTACCCGAGTGCAAACTCGGATGAGATTTTTCACTTCAACTGATAAACTTTCACAAAGGTCTCAGGAGCTTGTCACAGTTAAGaagttcaacaacaacaacacatttaggaaacctttttTTATGCTgactcctcttttctctccctttttcctttttatttctcaCTTCTttgaaaagacacaaaaaaatgattttccgTCGACAAGTTTCCACAAGCAgctgtttggtgtttttgtgcATTCCACCTGATAGATATTTGTTACTGTTGCATGTTTGTATTTATTAGTGTTTCTTCTGCCACATGAGGTGCAATTTATTGCTGGACCACAAGGTCAGCACTCAGCAGTTGATGTTTTTGTATCCGTAtcgtttttgtatttgtatcaatttgtaaaaaaaaaaaaaaatgtttctacacAATCTC

Function

NR:

description
PREDICTED: mortality factor 4-like protein 1

GO:

id name namespace
GO:0005634 nucleus cellular_component

KEGG:

id description
K11339 MORF4L1, MRG15, EAF3; mortality factor 4-like protein 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039795779.1 False 1611 mRNA 0.45 13 17173886 17185740
XM_039795781.1 False 1608 mRNA 0.45 12 17173886 17185740
XM_039795782.1 True 1716 mRNA 0.44 13 17173886 17185470

Neighbor

gene id symbol gene type direction distance location
uacab uaca coding downstream 1417 17107473 ~ 17172469 (-)
LOC120555746 tle3,LOC103353191 coding downstream 190688 16949641 ~ 16983198 (-)
anp32a anp32a,LOC104942769 coding downstream 622188 16546026 ~ 16551698 (-)
itga11a itga11 coding downstream 681243 16419863 ~ 16492643 (-)
LOC120556157 chrna7 coding downstream 879826 16260894 ~ 16294060 (-)
pias1a LOC102795560,LOC101487673,LOC102200240 coding upstream 14435 17200175 ~ 17263062 (-)
skor1a skor1,LOC102309670,LOC100696486,LOC101486626,LOC102796072 coding upstream 89238 17274978 ~ 17283831 (-)
map2k5 map2k5 coding upstream 110305 17296045 ~ 17370426 (-)
smad3a LOC104927744,LOC103353199,LOC108237917,LOC105936361 coding upstream 217012 17402752 ~ 17434673 (-)
smad6a LOC104930524,LOC103353200,LOC104949844,LOC100698095,LOC102202245,LOC101484891 coding upstream 270820 17456560 ~ 17475867 (-)
G27865 NA non-coding downstream 52306 17021921 ~ 17121580 (-)
G27775 NA non-coding downstream 531077 16638917 ~ 16642809 (-)
G27768 NA non-coding downstream 614881 16558638 ~ 16559005 (-)
G27767 NA non-coding downstream 615365 16557533 ~ 16558521 (-)
G27729 NA non-coding downstream 763950 16409470 ~ 16409936 (-)
G27909 NA non-coding upstream 107681 17293421 ~ 17294886 (-)
G27983 LOC100693649,LOC103353206,LOC102204817 non-coding upstream 377933 17563673 ~ 17605770 (-)
G27989 NA non-coding upstream 400125 17585865 ~ 17595161 (-)
G27998 secisbp2l non-coding upstream 424563 17610303 ~ 17729544 (-)
G28012 LOC101061426,LOC103379093,LOC106532957 non-coding upstream 437599 17623339 ~ 17624074 (-)
LOC120555730 adamts7 other downstream 765018 16321963 ~ 16408868 (-)
LOC120556162 znf609 other downstream 1014004 16071569 ~ 16159882 (-)
cfap70 LOC103368539,LOC102222702,LOC102790175,LOC102296598,LOC102204478,LOC104922799 other downstream 2095056 15050662 ~ 15078830 (-)
G27420 NA other downstream 2329981 14842713 ~ 14843905 (-)
LOC120556476 NA other downstream 2593875 14578027 ~ 14580011 (-)
LOC120556401 LOC104927750,LOC104949847,LOC103353195 other upstream 7773 17193513 ~ 17284509 (-)
G27925 LOC103353204,LOC106512954,LOC102223374,LOC104951141 other upstream 322383 17508123 ~ 17513168 (-)
c3h15orf48 clg1h15orf48,csgr07h15orf48,LOC103353210,LOC107085327,LOC104951152 other upstream 414010 17599750 ~ 17601390 (-)
G28121 NA other upstream 1032382 18218122 ~ 18220550 (-)
G28265 NA other upstream 1196965 18382705 ~ 18383642 (-)

Expression


Co-expression Network