slc6a2 (slc6a2)


Basic Information

Item Value
gene id slc6a2
gene name slc6a2
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 35489080 ~ 35523483 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039795793.1
TATCGTATCTGCTGGATAAGGCGAGTCTTAGAGTTGCTTCACAATGGGCAGTCTTCCCTCAGATGCATCTGGACAACAGCAGCATCGGGTCATGGAGAAGTGTCCCTAGCTTTACCAAcCCGTGTACGCGGAGGTATCAGCTGTATTTTCGGTGGAGAACATTCGCTTATCCTGTGTTTTGTCAGCGGGATTGTCGTCCTTAAGCGCACCGACTCACACCACCAGCTCCGCCCGAAGGCGCAGGGGGCCGTGAGAGCACCAGGGAGAAGATGAATATCCAGGTTCTGCCAGAACACAAGCTCTCGTCGGTGGCCCCGCTGAAACAGTGCAATGTGGAGAAAAAAGAGGTTGAACTGATACTGGTGAAGGACCAGAATGGCGTCCAGTACACCAGTTCCTCCATCATTCCCACCCCTGGCCACCTCGCAGGTCCTCCCGGATCCACCGAGGACGAGCGAGAAACTTGGGGCAAGAAAATAGACTTTCTCCTGTCGGTTATTGGCTTCGCGGTTGACCTGGCCAATGTTTGGAGATTTCCTTACTTGTGCTACAAAAATGGAGGAGGTGCCTTTTTGATCCCGTACATTCTTTTCTTGGTTATTGCGGGGATGCCATTGTTCTACATGGAACTTGCCTTGGGCCAGTACAACAGGGAAGGGGCGGCTACAGTTTGGAAAATTTGCCCTGTTTTCAAAGGTGTGGGCTATACTGTGATCCTCATAGCCCTGTATGTTGGCTTCTACTACAATGTCATCATTGCCTGGTCTCTCTACTACCTGTTCTCCTCCATGACCAATGAGCTGCCGTGGCTGAAATGTGGCAACATTTGGAACAGTGAGAACTGCACCGACCCCAAAGCCCTCAACGGATCCGTCCTCGGCAATGGAACATCTTACGCCAAGTACAAGATCACCCCGGCAGCTGAGTACTATGAACGGGGTGTGCTACATCTCCATGAGAGTAGGGGTATCCAGGACCTGGGCCTGCCTCGCTGGGATTTGTCATTGTGTCTTGTGGTGGTGGTCTTCATCCTCTATTTCAGCCTGTGGAAAGGTGTCAAGTCCTCAGGGAAGGTGGTGTACATCACAGCTACAATGCCCTACGTggtactttttgttttgttgatcCGAGGCATAACTCTACCAGGGTCCTGGGACGGTATCAAGGCCTACCTCCACATAGACTTCAAGCGGCTCAACAATCTAGAGGTGTGGATTGATGCTGCTACCCAGATATTCTACTCACTAGGAGCAGGATTTGGGGTGCTCATTGCTTTTGCCAGTTATAACAAATTCGACAACAACTGCTACAGGGACGCTCTCTTGACCAGCACTGTGAACTGCGTCACCAGTTTCTTCTCAGGGTTTGCCATCTTCTCTGTGCTTGGTTACATGGCTTACAAACATGGGGTGAAAATTGAAGATGTGGCAACAGAGGgggCTGGATTGGTGTTTATCATTTACCCTGAGGCAATTTCTACACTGCCTGGCTCAACATTTTGGGCTATTGTGTTCTTCATCATGTTGCTGACTCTGGGCATTGACAGCTCGATGGGTGGCATGGAGGCAGTCATCACAGGCCTATCAGATGACTTCAAGATCCTCAAGAGACACAGGAAAATGTTCACCTTCGCCACTGCCTTTGGAACCTTCCTGGTTGCACTATTCTGCATTACTAATGGTGGGATCTACGTGCTGACCCTGTTAGATAAGTATGCAGCAGGGACTTCTATACTATTTGCGGTGTTGATCGAGGCCATTGGAGTTTCATGGTTTTACGGTGTGGACCGCTTCAGCGAAGATATCGAGCGAATGATGGGCTTCAAGCCAGGTCTCTACTGGAGGCTATGCTGGAAATTTGTCAGCCCCGCTTTTCTGCTGTTTGTTGTAATCGCCAGTACTGTGACATCGTCAGGCCTAAAGTATGATGAGTACATCTTCCCTAATTGGTCCAACGTAGTTGGCTGGTGTGTTGCCATGTCCTCCATGCTGTTTGTCCCCTGCTATGCCATATACAAATTCTGCAGCGTACCAGGAACATTCAAAGAGagGATAGCCTATTGCATCACCCCAGAACATGAACAGCATTTGGTGGCTGAGGGAAATATACGGCAATTCACActTAAGCATTGGTTGGCCATCTGATGGCAATCACCCAGAATTCCCTCATCCATTCTCACATCTGGTGTTTGGAGTTCCTGTGTGCCACCAGTGGTCGGACAGACAAGAAGAGCAACAGACTCCAACCTCTCTCAGCAGCTTGCCTCTTCTCCATGTGCATTTACTACCCAATGCCTTTGTTGTCAACAGCTTAAAGCACTTTGATTTCAGAGTTAGGCCTGTTAACATTTTGAAACCATTCAAGAGCTTCATCGCTTAAGGGAGGGGCACCCCATGGGGACAATGTACTGTTATTTGCCCAtggacatttttatgttttttatatactATTTGAATTAATCATAACTTTACTTATGTATGTGATGCGACAATTATCTCCTGGAAGGGACATAAAGTtatagtaaaacaaaaacaatcccaTTATCCTGTATATTAGTATGCAGGGGAGCCAaatatttcaatttaaaaacttttttaggTCAATGATAATTTATTATTACATCACTGTTATGTTGGAAGAAAGTCTCGCTTGCTGGTCTTGCTGTTCTGTTGGCATAGTGGCTTGTCTGTGTCAGTGCCTTATCAAGCGAGACACTCCATGTTTCTTACAGTCCGTACAGGaagaaataaaatcaactgTGTTGACTCAGGAACTCACCAAATCAAGCCACAGTTAGTAGATGGCAATCTCTTGATTTGACCCAGTCCTTTGATACAGAAGTCAAACAGCTGGAGGTCAACAGTGCATCAAGGTCAAGCTCCTTAAATTATACCAGGCCTGCTATAATGCTTTTGTGTCATATTCTGTTACAGAAAAGGGAAAAGTGCATGCATCACTCCAAAgctttaaaagaactgagacaGGCTTCATTCACCTTATACTTTGAAACGTCAGACTCACAACCATGCCTTAATCTCAAAGAAAGTCTAAGGCTGAACCTGGTCAGTGCCGGCTGTTTACTGAAGATTCAGCAAAACAAATGGCGTAACTGTTACAGTTTTGTATTATTGTTGTGTGACTTTTACTTTGcaaatgtttgtctgttgtctgcttCTGAGGAATATATGTGGCTTTTCctccaaagagaaagagagagagagagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtatattcagATTTATTTGCAAACCATAAAGTACGCTGTTAGTGTACAATACATGGATGGGTGACTGCTGTCAAATGCTTCTTTCAGTGCATTAACTTAAATGCATGATAACAACGCTTATAATTTCTATTTGAAACATCTCTTGTGATGTTCCACTTTTTCATCACTATGGAAGTGCCAATATGTTCCTTTAGGAATGTTTTTGATTATCTTattcagtttctcttttttatttattggaaTGAAGATGAATTTTACCCATGAATTATAACAGACCCTTACTGAAAGGAATAAAGCCACAAagaaaaaatcaaatatatgTGGAATATATAAGaagacataaaaaatatattcttcTGTTATGTATAATCTTGTATTTATCAAATTGTTTATAACAAAACGTGAATGTAAAGTATTTTAAATGTAACTGTCCACAGTCATAACATAGTGTTTGATGTATAGCTAAGATGAACTATTTAGAAAAAGTATTCTTCAGAGTAACCCTGGGCTACTTTGTCACATATGAATGTGAACAAATACATCCTAGCTTTCCTGGACTATGTTTACAAAAATACTATGTACAATACCAATGTCCTGTTGAACGTGAGTGAAAACTATATATGAAGAAGTCTGAAGTATTCACACTATTATAATAAAGAATTTCTTCTACACACA

Function

symbol description
slc6a2 Predicted to enable dopamine:sodium symporter activity and norepinephrine:sodium symporter activity. Predicted to be involved in dopamine uptake involved in synaptic transmission; norepinephrine transport; and sodium ion transmembrane transport. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in neuron projection; neuronal cell body membrane; and presynaptic membrane. Predicted to be integral component of plasma membrane. Human ortholog(s) of this gene implicated in hypertension and neurocirculatory asthenia. Orthologous to human SLC6A2 (solute carrier family 6 member 2).

NR:

description
PREDICTED: sodium-dependent noradrenaline transporter

GO: NA

KEGG:

id description
K05035 SLC6A2, NET; solute carrier family 6 (neurotransmitter transporter, noradrenalin) member 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039795793.1 True 3927 mRNA 0.44 15 35489080 35523483

Neighbor

gene id symbol gene type direction distance location
slc12a4 slc12a4 coding downstream 20271 35442829 ~ 35468809 (-)
pkma pkm,LOC101466927,LOC102785629,LOC105930156,LOC107381266 coding downstream 329547 35139463 ~ 35159533 (-)
rec114 NA coding downstream 467776 34964659 ~ 35021304 (-)
LOC120556290 LOC102076597,LOC103462686,LOC102304084,LOC106922154,LOC106961725,LOC106587172,LOC107081502 coding downstream 519455 34964948 ~ 34969625 (-)
chrna5 NA coding downstream 534003 34942334 ~ 34955077 (-)
lpcat2 lpcat2 coding upstream 8465 35531948 ~ 35544685 (-)
mmp2 mmp2 coding upstream 22061 35545544 ~ 35562094 (-)
irx6a irx6 coding upstream 86670 35610153 ~ 35616798 (-)
irx5a irx5 coding upstream 247826 35771309 ~ 35775069 (-)
fto fto,LOC102782469 coding upstream 502680 36026163 ~ 36146418 (-)
G32072 NA non-coding downstream 305307 35101940 ~ 35183773 (-)
G32077 LOC102786496,LOC102306459 non-coding downstream 353370 35134739 ~ 35135710 (-)
G32070 NA non-coding downstream 418189 35070367 ~ 35070891 (-)
G32060 LOC103373785,LOC104925039 non-coding downstream 485629 34993457 ~ 35003451 (-)
G31994 NA non-coding downstream 621562 34864877 ~ 34867518 (-)
G32153 NA non-coding upstream 103048 35626531 ~ 35700759 (-)
G32187 NA non-coding upstream 243245 35766728 ~ 35766929 (-)
G32236 NA non-coding upstream 506372 36029855 ~ 36030115 (-)
G32242 aktip non-coding upstream 691527 36215010 ~ 36216531 (-)
G32246 NA non-coding upstream 696968 36220451 ~ 36222194 (-)
G31955 NA other downstream 889539 34490660 ~ 34599541 (-)
LOC120555494 arpp19,LOC101481874,LOC103358163 other downstream 1672692 33806918 ~ 33816388 (-)
serf2 NA other downstream 1919701 33566371 ~ 33569379 (-)
znf710b LOC104936257,LOC102799163,LOC101477128 other downstream 2017745 33436811 ~ 33471335 (-)
wdr76 frmd5,LOC103354945,LOC103374291 other downstream 2135632 33342247 ~ 33353448 (-)
cylda cyld other upstream 1336064 36859547 ~ 36882795 (-)
nod2 nod2 other upstream 1360168 36883651 ~ 36891304 (-)
ss18l2 ss18l2 other upstream 1707658 37231141 ~ 37253426 (-)
LOC120556344 lrrc49,LOC102795887 other upstream 2265242 37788725 ~ 37827271 (-)
slc6a5 slc6a5 other upstream 3681792 39205275 ~ 39235746 (-)

Expression


Co-expression Network