fah (fah)


Basic Information

Item Value
gene id fah
gene name fah
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 9308597 ~ 9325288 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039795797.1
AAGTGCTTGCTGCTGCTCAGTCACTCAGTCTCTCAGTTAGGTTGAGTGGAATAACACTGCCAAAGAGAAGATGTCCTTCATAAAAGTAGATGCATTGTCTGATTTCTCCTTCCACAACCTCCCTTATGGAATATTCTCCACGCCTGATAATCCCAAATGTCGCATTGGTGTTGCCATTGGAGACCAGATACTGGACCTCAGCGTGATAAAGTCTTTGTTTCGAGGGCCTGTGATTTCCAAACATCAAGATGTGTTTGACCAGCCCACGTTGAATGATTTCATGGCTCTTGGTTATGAGGCCTGGAGGGAGGCCAGGAGGACCTTGCAGGGCTTGCTGTCAGCCAATGAGAGCACACTGAGAGATGATGTCAGCCTTCGGAGCAGAGCATTTGTCCACCAGAGTACAGCCATCATGCACCTTCCTGCAGACATTGGCGATTACACCGACTTCTACTCGTCCAAAGATCATGCTACCAATGTTGGCATCATGTTCCGGGGGAAGGAGAATGCTCTGATGCCAAACTGGTTGAGGCTTCCAGTGGGATACCATGGTAGAGCATCATCAGTGGTTGTTTCTGGGACCCCCATCCGTCGCCCCTCAGGCCAGATGAGACCTGACCAGACAAAACCACCAGTGTTTGGACCGTCTAAACAGTTGGACATCGAGCTGGAGATGGCCTTCTTTGTTGGAGGAGGGAATCAGCTCGGGGAGCCTATTCCCATCAAGAAAGCCCATGAACACATCTTTGGCATGGTACTCATGAATGACTGGAGTGCCAGGGACATCCAGGCATGGGAGTATGTTCCTCTTGGTCCTTTCCTGGGGAAGAACTTCGGGACAACCATCTCACCCTGGGTCATCCCAATGGAAGCACTCTTACCCTTTGCAGAGCCCAACTCCATCCAGGATCCAGAGCCCCTACCCTACCTGCAACACCCTGATGCTTTCACTTTCAACATTAACCTGTTTGTGTCACTCAAAGGACAGGACATGGCAGAGGCAGCAACCATCAGCAAGTCCAACTTTAAGtACATGTACTGGACCATGAAGCAGCAGCTTGCCCATCACACAGTCAACGGTTGCAACGTCAGACCAGGAGACCTGCTGGCTTCTGGTACCATCAGTGGACCTGATCCAGAGAGTTTTGGCTCCATGCTGGAGCTGTCATGGAGGGGATCTAAGAACATCGATCTGGGAGGAGGAGAAACCAGAACCTTCCTGAAGGATGGAGATGAAGTCACCATCACAGGTTACTGTCAAGGAGATGGATACAGGGTGGGCTTTGGAACCTGCATGGGAACCATTCTCCCTGCCCTGCAGCACTGAAACACGCTTACTGTTATTTAGGTGGGAATCCTTTTGTGGAGCATAAATACTGGAAGACGCAAACGTACATGCCTACAATATCTCACccacattttaaccatttatttatgtccacatgAAGAAAATGGTACAGGGACACAAATATTATGGATGCAGTACAATACATACGCAAACTCATGGACCAGTGGCATGCAGCAggtcttcacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacaaactttctCTTAAAATGATGTGTTTCCAGCTTTACTTAAGTCTTCATGCGGTATCATCCAGCTGAGGGATGCTCCCACATCCAGTCACAGTGTTACTGCTATACCAGGATCAGTGTTATTGATGTTTTCTATGTGTTGGCTCCTGATTTAAAATGAAAGTCATCCATTTTTAA

Function

symbol description
fah Predicted to enable fumarylacetoacetase activity. Predicted to be involved in L-phenylalanine catabolic process; homogentisate catabolic process; and tyrosine catabolic process. Predicted to act upstream of or within aromatic amino acid family metabolic process. Is expressed in epidermis; fin; head mesenchyme; liver; and pharyngeal arch 3-7 skeleton. Human ortholog(s) of this gene implicated in tyrosinemia type I. Orthologous to human FAH (fumarylacetoacetate hydrolase).

NR:

description
PREDICTED: fumarylacetoacetase

GO: NA

KEGG:

id description
K01555 FAH, fahA; fumarylacetoacetase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039795797.1 True 1793 mRNA 0.48 14 9308597 9325288

Neighbor

gene id symbol gene type direction distance location
arnt2 arnt2 coding downstream 79020 9153242 ~ 9229577 (-)
LOC120555843 LOC104937892 coding downstream 2002267 7304084 ~ 7306330 (-)
LOC120555919 NA coding downstream 2256120 7045853 ~ 7052477 (-)
hdgfl3 LOC103366351,LOC102309090,LOC101465811,LOC100694012,LOC106907470 coding downstream 2266456 7028566 ~ 7042141 (-)
LOC120556367 LOC104932139,LOC100695351,LOC108237907,LOC102197162,LOC103129685,LOC106520888,LOC101465514,LOC103366349,LOC102224277 coding downstream 2285425 7005842 ~ 7023172 (-)
chsy1 chsy1 coding upstream 802690 10127978 ~ 10231722 (-)
selenos NA coding upstream 908176 10233464 ~ 10241227 (-)
zgc:113274 NA coding upstream 918836 10244124 ~ 10245386 (-)
snrpa1 snrpa1 coding upstream 933943 10259231 ~ 10292924 (-)
ano9b ano9,LOC103369658,LOC100691858,LOC102197938 coding upstream 1315650 10640938 ~ 10731901 (-)
G26299 NA non-coding downstream 10847 9296758 ~ 9297750 (-)
G26278 NA non-coding downstream 61173 9247107 ~ 9247424 (-)
G26232 NA non-coding downstream 471688 8836064 ~ 8836909 (-)
LOC120556469 NA non-coding downstream 749843 8552479 ~ 8558754 (-)
LOC120555518 NA non-coding downstream 817856 8490284 ~ 8490741 (-)
G26322 NA non-coding upstream 18257 9343545 ~ 9344861 (-)
LOC120556388 NA non-coding upstream 26020 9351308 ~ 9354489 (-)
G26355 NA non-coding upstream 284147 9609435 ~ 9610939 (-)
G26371 NA non-coding upstream 315908 9641196 ~ 9679100 (-)
G26381 NA non-coding upstream 369247 9694535 ~ 9694880 (-)
G26298 NA other downstream 11851 9295068 ~ 9296746 (-)
LOC120555589 cemip other downstream 329453 8759601 ~ 8979144 (-)
tlnrd1 mesdc1 other downstream 549789 8733419 ~ 8758808 (-)
il16 LOC102796330 other downstream 610975 8630608 ~ 8697622 (-)
LOC120555934 NA other downstream 811962 8494353 ~ 8496635 (-)
mtfmt mtfmt,LOC102776665,LOC102776373 other upstream 2151218 11476506 ~ 11510300 (-)
LOC120555651 NA other upstream 2317943 11643231 ~ 11669269 (-)
G26891 NA other upstream 2635413 11960701 ~ 11961772 (-)
G26924 LOC108281047 other upstream 2979251 12304539 ~ 12304824 (-)
G27075 LOC104939823,LOC100707594 other upstream 3744708 13069996 ~ 13095766 (-)

Expression


Co-expression Network