LOC120556313 (LOC104939823,LOC100707594,LOC101479997,LOC105924362)


Basic Information

Item Value
gene id LOC120556313
gene name LOC104939823,LOC100707594,LOC101479997,LOC105924362
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 13065952 ~ 13071332 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039795800.1
TTAAACAATCAACCGAAGAAGAAGTCGTTGCCTTCCCAGTCAAGCTAAGGTCGTTGCAGCAGTTCGCCGCAGATATGATGTCTCTCGCTGCCCGGTCAGGGGCATTTTCCCCTTACATGCAGGCTACAGCTGTTGCTGTCGCTGGTCCCCTGAAAGCACTGGTACCCGGGGTTGTTGTAAAAGGAGAGAAGATTTTGTTGACCCCGAAAAAAACGTTCCTGTGCCGCGAATCGCTCAGCGGTCAAAGCCCAAAGACGGGGCCTGCTGTGACAGTTAGCATCAATGgctGTGCAGCGGTGCGTTATGCCCACACAGACGTGCGGGTGCCGGACTTCTCTGACTACAGGCGCCCCGAGGTGCTGGACCCCAGCAAGTCGTCCCAGGACAGCAGCGAGGGGAGGAGGACCTTCTCCTACCTGGTGACGGGCGCCACCACCGTGGTGGGTGTCTACGCCGCCAAGACGGTGGTCTCTCAGTTTGTGTCTTCCATGAGCGCGTCGGCGGACGTCCTGGCCCTGTCCAAGATCGAGATCAAGCTGAGCGACATCCCCGAAGGCAAGAACATGACCTTCAAGTGGAGAGGCAAGCCGCTGTTCGTGCGCCACCGCACGGAGAAGGAGATCGCCACGGAAGCAGGCGTCAACCTGGCGGAGCTGCGAGACCCGCAGCACGACAAGGAGCGCGTGCAGAACCCCAGCTGGGTCATCGTGCTGGGCGTGTGCACGCATCTGGGCTGTGTGCCGATCGCCAACGCTGGCGACTTTGGAGGCTACTACTGCCCGTGCCACGGCTCGCACTACGACGCCTCGGGCCGCATCAGGAAAGGCCCCGCTCCCCTCAACCTTGAGGTTCCCTACTACGAGTTTCCAGATGACAGCACGGTGGTTGTTGGATAGAGAACGTGATAAAACAGCAGGTGTTACAGTGTTCACGTGTCAGTGCTGCTGCCAGCTGCAGCGGGAAACTTTGTCTCAGCGCCACAAGCCTCTCTAACAGTCCTCTCTATCTACTGGAGTTCATGGAAGGTAATCTCTTTAACACAAGGACAGAAAAGCATTTGGAATGAATAGGTGAACACTTGGGCTGGGTaacgaattcaatacttttgaGACaacgaccgaattgcctcttaAAGTATCGAGTATGGAAAAATGCCTCGccattcaatacctaaggagtaaatcgcatcagtcagtgagccaatcagcacgcagcatgcttctaccaagatctaataatgtatGTGATTGGCTGTATAAcattacacgtcgtagagacacgcaggaaaaattCTACGTGACACAGAGACGGCTCACGTAGTCGGAGCTGGAACATGAGATTTGTGCTGTAATCTtgccatttctttttgtttcatgAAATTGTTCAGGAAGCGGtataaaagtcacagtattggtacTGGTACCGAAATGTTTTGAaggatacccagccctagtgaacACCAGGCAGAGTCCATCCTCTCTGGTTTCCTCATGTCAGAATATCACGTGAACATGACCTAAACACCTGCTTATCATATTAACTTATAGTCCATTTAACCAGCCCAGAACAAATGTTGTGTTCACGTCTGCTTAATAaagatttgtattttatttgaaaacGTGGA

Function

NR:

description
PREDICTED: cytochrome b-c1 complex subunit Rieske, mitochondrial

GO: NA

KEGG:

id description
K00411 UQCRFS1, RIP1, petA; ubiquinol-cytochrome c reductase iron-sulfur subunit

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039795800.1 True 1624 mRNA 0.52 2 13065952 13071332

Neighbor

gene id symbol gene type direction distance location
LOC120555527 NA coding upstream 503399 12556047 ~ 12562553 (+)
LOC120556595 NA coding upstream 1034224 12031621 ~ 12031728 (+)
minar1 kiaa1024,LOC107562943,LOC102799073 coding upstream 1927554 10934633 ~ 11138398 (+)
LOC120555826 NA coding upstream 1934480 11129921 ~ 11131472 (+)
shcbp1 shcbp1,LOC104947898,LOC104967817 coding upstream 2225803 10789845 ~ 10840149 (+)
LOC120556474 NA coding downstream 18203 13089535 ~ 13091435 (+)
si:cabz01068815.1 NA coding downstream 73175 13144507 ~ 13176403 (+)
kbtbd13 NA coding downstream 133507 13204839 ~ 13208335 (+)
spg21 spg21,LOC102788283 coding downstream 180833 13252165 ~ 13271218 (+)
si:ch211-102l7.3 LOC102292170 coding downstream 606800 13678132 ~ 13696767 (+)
G27064 NA non-coding upstream 41136 13024501 ~ 13024816 (+)
G27028 NA non-coding upstream 166765 12898975 ~ 12899187 (+)
G27023 NA non-coding upstream 195081 12870644 ~ 12870871 (+)
G27016 NA non-coding upstream 239318 12826392 ~ 12826634 (+)
G27012 NA non-coding upstream 263272 12802463 ~ 12802680 (+)
G27081 NA non-coding downstream 25499 13096831 ~ 13097130 (+)
G27085 NA non-coding downstream 37630 13108962 ~ 13109190 (+)
LOC120556095 NA non-coding downstream 130085 13201417 ~ 13202220 (+)
G27129 NA non-coding downstream 175368 13246700 ~ 13248009 (+)
G27161 NA non-coding downstream 307714 13379046 ~ 13381280 (+)
lto1 oraov1 other upstream 1153230 11903272 ~ 11912722 (+)
aldh1a3 aldh1a3,LOC106562593,LOC103357544,LOC104941118 other upstream 3205952 9814697 ~ 9860000 (+)
asb7 asb7,LOC102792420 other upstream 3388925 9653578 ~ 9677027 (+)
adamts17 adamts17 other upstream 3461490 9391108 ~ 9604462 (+)
cers3a cers3,LOC102798777 other upstream 3687341 9333229 ~ 9378611 (+)
G27086 NA other downstream 38425 13109757 ~ 13110339 (+)
LOC120556202 NA other downstream 163903 13235235 ~ 13237819 (+)
slc35c1 slc35c1 other downstream 600145 13671477 ~ 13676613 (+)
lrrc4cb LOC104946080,LOC107396660,LOC103367510,LOC108234802,LOC101071141 other downstream 738603 13809935 ~ 13856423 (+)
bbox1 bbox1,LOC102798250 other downstream 1637230 14708562 ~ 14735176 (+)

Expression


Co-expression Network