pias1a (LOC102795560,LOC101487673,LOC102200240)


Basic Information

Item Value
gene id pias1a
gene name LOC102795560,LOC101487673,LOC102200240
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 17200175 ~ 17263062 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039795828.1
CAGCACCTCACCACGCCTGCGCAAAGAAATACAAGATGGCGGAGAGTGCGGAACTGAAGCAAATGGTGATGAGCCTGCGGGTGTCTGAGCTGCAGGTGCTGCTGGGCTACGCTGGACGCAACAAGCACGGACGCAAGCATGAGCTGCTGACCAAGGCGCTGCATCTGCTCAAGGCTGGCTGCAGCCCCGCCGTGCACATGAAGATCAAAGAGCTCTACCGACGACGCTTCCCCGCCAAAATGGTATCCCACTCAGAACTGGCCATGCCCGGGCCACACCACCCGGCCACAGCTGGAGTGGTTGGAGGAGGGGGCGCCGCACTGCCTGCTGGCCTGACACAGCTGGCGTACGAGGGTCACGCCGGCCACGGTGGAGCCCCGTCGCCCGCTGCCTTACTGCCCCTCTCACTGCTTGGCCCTGGGAAGCACGAGATAACGGGGCTGACACACCACCTGTCCAGCTCAGCCACGCTGCACCCGGTCCACCCAGATGTCAAGCTCCAGAGGCTGCCCTTCTACGACATGCTGGACGAGCTCATCAAGCCAACCAGCCTAGcaTCAGACAACAGCCAGCGATTTCAGGAGACGTGTTTCGCCTTTGCGTTAACGCCCCAACAGGTCCAGCAGATCAGCAGCTCAATGGACATCTCGGGGACCAAATGTGATTTCTCAGTTCAAGTTCAGTTGCGGTTTTGCCTGTCGGAGACGAGCTGTCCTCAGGAAGACCATTTTCCACCCAATCTGTGTGTGAAAGTCAACGGGAAGCCATGTAACCTGCCGGGTTATCTTCCTCCAACCAAAAACGGCGTAGAGCCCAAGCGGCCCAGCCGGCCCATCAACATTACCTCACTGGTCAGATTGTCCACCACAGTTCCCAATACCATTGTGGTGTCGTGGACCGCTGAGATTGGAAGGAGTTACTCCATGGCAGTGTACTTGGTGAAGCAGCAGTCATCCACAGTGTTGTTACAGAGACTACGAGCAAAGGGCATCAGAAACCCGGACCACTCCAGAGCACTCATCAAAGAGAAGCTAACAGCAGATCCAGACAGTGAAATAGCCACGACCAGCCTTCGAGTGTCGCTGCTCTGCCCGCTGGGGAAGATGCGGCTGATGATCCCGTGCCGGGCGCTGACATGCTCCCACCTGCAGTGCTTTGACGCCACACTGTACATCCAGATGAACGAGAAGAAGCCCACCTGGGTGTGTCCTGTCTGTGACAAGAAGGCCCCCTATGAACACCTCATCATCGACGGGCTTTTTGTGGAGATTCTCAACAGCTGCATGGACTGTGATGAGATCCAGTTCAAGGAGGATGGCAACTGGGCCCCCATGAGGTCTAAGAAGGAAGTGCAGGAGGTCTCCTCTGCTACCTATAACAACAGGCTGGATGGTTCATGTCGGTCGTCCGCAGGCTCAGATCAGCGGAGCTCTTCGGCGTCCAGCCACGGTGGCAGCGACAGCAGCAATAGCAAGAAAGTGGAGGTGATCGACTTGACACTGGACAGCTCCGACGACGACGACGAAGGACCGGATTCACCACctccgccgccgccgccgccgctgcCTCCTCCGCCCAAAAGAGCGTGCCCCTCTGTTTCCCCGACCTCGCCACCCATCATCAACAAAGGAGTGTTGAACCTGCACCACCAGGCCTCCCCTGTGAGCCGCACTCCCAGCATGCCCGCCGTGGACACCAGCTACATCCCTCCTGTCCCCCCTCTCATCCAGGACTATAGACCCTACTACCACACCCCCAACGACCTGTCAGAGTTGaacttcttctcttttcttcaaGGCGACAATCACCAGCATTACAACATGGTGATGGCAGCAGCGGCCGCCGCTTCGGCGTCAGACGACCACGAGCTGCTTCTCAACCGCTTCCTGCCCTAcagcacctcctcctcctcgtcccaGCTGTTCCTCGACCAATCCGGAGCCTCCTCGGCCCCTTCGCTGACCGTGCCGACCAACGGGGCGAGCAACTCggggagcagcagcagcctggtGTCGTCCAGCAGCCTCCGCGACTCTCACTCCGCACACTCGTCTTCGCACTCGGGCTCCCACTCCTCCCACTCCCACCCCGGGGTTTTGGCCAGCCGGAGCAGCGCTGAAGCAGCAGTGGCAGCCATTTACGGCGGGATCCCCGACGTTATATCGTTGGACTGACTCGAGAAGAGTCAAGGCTAAACTTTGGGTCCAGCTGCAATCCAGTAACAGGCTTTTTGACTGCAGGGTAAAGTTTTGATCCAGAAACTAGACTGGGCCCCAAGTCATAAAACTCCAAACGTTTGTGGAGTCGTAATGACAAGACTGCCTCACGAAGAGCATTAATATTATAAACAGGCCTGAGGGTTCCCTTCACCAGACTGACCTGAGAACAGTACTGAGACATCACTTAAAAGGGTCAGCTGTGGACATTCTGTTTGTATACTGACTTCAGATCAGAAACCTGTCCAGCATGTGAACCCACGCAACTGCGATACTGGTACCAACCCGGCACAAGCGGCAGAGACGCTacctgaacaaaaacacaaaggaggacggctcttttttttttttacgaagaCGAGGAGTGGCACCGTGTACAgagaacaaaatatattttcctCTTTTACTTTTGTATgttaaaccgggacattttcaGTCTAGTGAGCTGCTCCAATCGCTGTTTTTAAGTGGACAACTGAGGTTGTTTtggcttattttttttcttctattataCATAGGCCTGTTGGCATTAGGGTTGCAAAGGGGCGGAAATTTTCCGGTAAATTTccggaaactttccatggaaagtttagctgcggaattttggaaacattctaattttgatttactatggttaGCGGGCTATACAAATAACACACATAGGTTAATAATAGCAATGGATTATGTATT

Function

NR:

description
PREDICTED: E3 SUMO-protein ligase PIAS1-like isoform X1

GO: NA

KEGG:

id description
K04706 PIAS1; E3 SUMO-protein ligase PIAS1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039795828.1 True 2906 mRNA 0.55 13 17200175 17263062

Neighbor

gene id symbol gene type direction distance location
LOC120556297 LOC103353194,LOC104949848 coding downstream 14435 17173886 ~ 17185740 (-)
uacab uaca coding downstream 27706 17107473 ~ 17172469 (-)
LOC120555746 tle3,LOC103353191 coding downstream 216977 16949641 ~ 16983198 (-)
anp32a anp32a,LOC104942769 coding downstream 648477 16546026 ~ 16551698 (-)
itga11a itga11 coding downstream 707532 16419863 ~ 16492643 (-)
skor1a skor1,LOC102309670,LOC100696486,LOC101486626,LOC102796072 coding upstream 11916 17274978 ~ 17283831 (-)
map2k5 map2k5 coding upstream 32983 17296045 ~ 17370426 (-)
smad3a LOC104927744,LOC103353199,LOC108237917,LOC105936361 coding upstream 139690 17402752 ~ 17434673 (-)
smad6a LOC104930524,LOC103353200,LOC104949844,LOC100698095,LOC102202245,LOC101484891 coding upstream 193498 17456560 ~ 17475867 (-)
tmem208 tmem208 coding upstream 229046 17492108 ~ 17495778 (-)
G27865 NA non-coding downstream 78595 17021921 ~ 17121580 (-)
G27775 NA non-coding downstream 557366 16638917 ~ 16642809 (-)
G27768 NA non-coding downstream 641170 16558638 ~ 16559005 (-)
G27767 NA non-coding downstream 641654 16557533 ~ 16558521 (-)
G27729 NA non-coding downstream 790239 16409470 ~ 16409936 (-)
G27909 NA non-coding upstream 30359 17293421 ~ 17294886 (-)
G27983 LOC100693649,LOC103353206,LOC102204817 non-coding upstream 300611 17563673 ~ 17605770 (-)
G27989 NA non-coding upstream 322803 17585865 ~ 17595161 (-)
G27998 secisbp2l non-coding upstream 347241 17610303 ~ 17729544 (-)
G28012 LOC101061426,LOC103379093,LOC106532957 non-coding upstream 360277 17623339 ~ 17624074 (-)
LOC120555730 adamts7 other downstream 791307 16321963 ~ 16408868 (-)
LOC120556162 znf609 other downstream 1040293 16071569 ~ 16159882 (-)
cfap70 LOC103368539,LOC102222702,LOC102790175,LOC102296598,LOC102204478,LOC104922799 other downstream 2121345 15050662 ~ 15078830 (-)
G27420 NA other downstream 2356270 14842713 ~ 14843905 (-)
LOC120556476 NA other downstream 2620164 14578027 ~ 14580011 (-)
G27925 LOC103353204,LOC106512954,LOC102223374,LOC104951141 other upstream 245061 17508123 ~ 17513168 (-)
c3h15orf48 clg1h15orf48,csgr07h15orf48,LOC103353210,LOC107085327,LOC104951152 other upstream 336688 17599750 ~ 17601390 (-)
G28121 NA other upstream 955060 18218122 ~ 18220550 (-)
G28265 NA other upstream 1119643 18382705 ~ 18383642 (-)
G28269 mapk6 other upstream 1153007 18416069 ~ 18420499 (-)

Expression


Co-expression Network