LOC120556324 (neto2)


Basic Information

Item Value
gene id LOC120556324
gene name neto2
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 1848854 ~ 1871276 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039795842.1
ACTCATTGATGTAAGCAGCGGCCACGGTTTAAATGAGCCTCGTTCAGAAGCTTTGCTTAGTTCAGACACGGAGGAGAAGCAGACAGAGTCggactctcttcctcttccttctttttcctcttcctccatactcttcctccatctctccgTCTTTTTGGATACCCATCTCTCCTAGAGCGCATCCGCCCACCTGTCATCTCCGCTGTAGTGCCACTGGAAGCTGTGTTCCCAGTGATGATGCCTGGCTGAAAGGCTCGCAGCACTGTTCATCTTCCAGCCAGACGCCGCGGGACCGCCGACTGAAGAAGAGCTCGGTGCTGCTAGTCTTCTCGGAGCGTGGCTCTGCGTAATGGATTTACGGTTGTCAGAGAAAAGTTGGGTTTTGTGAAGAGCCCCGTGGACCCCTTAAGATGGACAGAAAAGGAGAGCGTTTTTAGAAAGGTGCTTTTGGGTTGGAATCACACCGTGAGAGGAAATGCACAGAGCGTGGATACTCTTCTTTCTCATAGAAGAGGGTTTCGCTCTGGCACAGAGAACTAAAGATTCCCCAAGCGAGCATGGCGGCCAGAGCCCTAACCAGAACGACTGTGGCACGTGGGTCCGCAACATCAATGGCGGGGTGTTCACATCGCCAAACTACCCCAACACCTACCCTCCCAACAAGGAGTGTGTTTACATCCTGGAAGCTCTTTCTAGACAAAGGATTCAGCTGGCTTTTGATAAGAATTACTACATCGAGCCCTCATTTGAGTGCCGCTTCGATCACATCGAAATCCGTGATGGGCCATTTGGGTTCTCGCCGCTCATTGACCGCTTCTGTGGGGGAAAGAACCCAGGCCTGGTTACATCGACGGGACGTTTCATGTGGATCAAGTTCACCAGCGACGAGGAGCTGGAAGGCCTCGGCTTCCGCATTAAGTACACCTTCATTGCAGACCCTGATTTTCATCTGCATGTGGGCGGACTGCTAAACCCCATCCCAGACTGTCAGTTTGAAATCGGTGGATGGGATGGGATTATTCGCTCCAGTCAGGTGGATGAGGAAGAGAAAGTGAAGCCTACCGATGCTCTGGACTGTATCTGGACCATCAGGGCTCCTCCTCAGTCCAAGATCTACCTGCGCTTCATGGAGTACCAGATGGAGCACTCAAATGAGTGCAAGAAGAACTTTGTGGCCGTGTATGATGGCAGCAGTGCCATCGAGAACCTCAAGGCCAAATTCTGTAGCACCGTTGCCAATGATGTGATGCTGGATACCGGTGTGGGAGTCGTGCGAATGTGGGCTGATGAGAAGAGCCGACTCAGCCGTTTCCGCATGCTCTTCACCTCATTTGTTGACCCCCCCTGTTCAGCCAATACATTCTTCTGCCACAGCAACATGTGTATTAACAACTCCCTGGTGTGCAATGGAGTTCAGAACTGTGTCTACCCATGGGATGAAAACCACTGCAAAGAGAAGCGATCTAAGGGGCTTTTTCATCAGATCACTAAAACCCATGGCACCGTCATTGGTGTCTCATCAGGCATAGTTCTGGTTCTTCTTATCATTTCTGTCCTGGTCCAGATGAAGCAGCCAAGGAAAAAGGTTGTAGCTCGGCGGCCTGGCGTTTTCAACAAGGCAGGCTTCCAGGAGGTCTTCGACCCGCCCCACTACGAGCTCTTCTCCCTACGCGACAAGGAGATATCGTCAGATTTAGCTGACCTGTCTGAGGAGCTGGACAGCTTCCACAAGCTGCGGCGCTCCTCCACCATGTCCCGCTGTGTCCACGAGCACCACTGCGGCTCGCAGGCCTCTGTAGCTACTGGAGGCGGCAGCATGAAGCACAGCCGCACCACCCTGAGCTCCCTGGAGCTGTCCTACCACAACGACTTCTCCAAGCCACCACCCATGAAGACGTTCAACTCCACGGCCAGCTACAAGAAGAGCTGCTATGGCTACAAGCAGCACTCACAGACTCACGACTGCGACCAGAAGGTCATCGAGGACTTGGTCACAGAGGAGATCCCATGTGAGATCTATGGGCGTGGTGGAGCAGGGGTGGGAGGAGGAGCCACAGGCGGAGCAATGGGAGGAGTAGGAGTAGCATCAGGGATTGCAGGAGGGGGGATTGGAGGAGCGGTGGGGATAACAGGAGGAATGGCGATGGCTGGGGGAATGGGTATGGCGGGAGGAGTGGGCATGGCGGGGCCTAGTGGCATCGCTGGAGGTATTGGTGGGATGGCAGGACCCTGCGGAACCCTCAGTGTCCGTGGCAACAGCGCTCGTAACAGTACCACCATAGTTGACCCCCAACAGCGCTCCATGTCCATGGACTTTTAGATGGTGaatggagaaagaaaaggagaaagggAATGCAGAAAGAGCTCGCATTTCACTCATGGAAAGAAGAAACGGAGGAAGAGAAGACAGGAGAGACCCAATAATCTTGTATTGATCACTCCTCTTCCGCCTTTGCTTTCAAAGCAGTATTAACAGTATTGCACACTTAAGATCGGATCTTCTCATCACAAGGTCTTCTCTGAAGGTTTGGGAAATTCGCAGACAAAAATCAAGGatcaaaaagagtttaaaaaaaaaccctgtgCTGTTGGTTCTATTCTTCAGGATACTGCAGGATGTAGGGTGAAGAGAGACCTCTTGTCTCTCCTCAAGTCTCATAGGCCTACTCATTTAATCTCTCCTTTTCATAAGACACATATTTCGCATGCAGACCCAGACTGCTCTCTGTTTGGTAGCCTAAAATACCAGGTAACCACTCAGAaacaaggagagagaaaaagatgaaGAGACGTCCTGGACTGAGTTTCTACATTTATTCCCCTGATATATATGATGCACAGATATATGATATATAGTGCATCTTCTAATAATTTAAgtctttatttttgtcagtgtaCTGTACTGTTAAAACCAGTATATATCCAGCCTCATGATGATGCTTGGCTTTTAAATCTTTAATCTTTTTCAAATGTTGCTCGGGTGATTTTTTTGGAGATAACTTATCAATGACATGGTgttgatgatgaggaggaggatgatAACAATGTTTATGATGTGATATTACTATAATAATTCTGTAATTTTCATGGTTacctcacacatacacagaaggCACGCTCCATTCAGTCTCTCCTCAGGAAGAGCACATGAAGAGACGGTATTATTTAggtaagaaagagaaaaaaagtataTTTCTGCTGGTGAGCTTTATACTATATGAGCATTCAGGCTATAAGTGAGCGTTTATGGAATATGAAATGTTTGGTTGTGAGACCTGGACTAAATCAAAATAGCAACCATCCCACCCTTACTAGGAGAAAATGTAATTTCTCAATTGCCCCATGAACTATGAAGTGTGTAAAATAAGCACAACCTGTTTCCCTAAAAAGACAGACATGTAGCCTATATGAGACTCATTTATGATTTTAACCACTGGTTGTATAATTTCATTCTGTTGAATTAAATGAGAGCTTACTCGCC

Function

symbol description
neto2 Predicted to enable ionotropic glutamate receptor binding activity. Predicted to be involved in regulation of kainate selective glutamate receptor activity. Predicted to be located in synapse.

NR:

description
PREDICTED: neuropilin and tolloid-like protein 2

GO: NA

KEGG:

id description
K24360 NETO; neuropilin and tolloid-like protein

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039795842.1 True 3481 mRNA 0.48 10 1848854 1871276

Neighbor

gene id symbol gene type direction distance location
dnaja2a dnaja2 coding downstream 1932 1835088 ~ 1846922 (-)
trnat-agu_3 NA coding downstream 15460 1833321 ~ 1833394 (-)
lrp3 lrp3 coding downstream 16908 1818431 ~ 1831946 (-)
rhpn2 rhpn2 coding downstream 74433 1744192 ~ 1774421 (-)
LOC120555617 NA coding downstream 340946 1459164 ~ 1507908 (-)
itfg1 itfg1 coding upstream 1555 1872831 ~ 2039002 (-)
cdh8 cdh8 coding upstream 971167 2842443 ~ 2961584 (-)
LOC120555903 NA coding upstream 1291619 3162895 ~ 3163677 (-)
phospho2 phospho2,LOC100704477,LOC102197635,LOC101485115,LOC102782954 coding upstream 1348494 3219770 ~ 3223756 (-)
slc7a6os slc7a6os,LOC102781591 coding upstream 1438104 3309380 ~ 3317933 (-)
G25113 NA non-coding downstream 186368 1661728 ~ 1662486 (-)
G25112 NA non-coding downstream 187157 1661359 ~ 1661697 (-)
G25111 NA non-coding downstream 187501 1660832 ~ 1661353 (-)
G25110 NA non-coding downstream 188119 1660494 ~ 1660735 (-)
G25039 NA non-coding downstream 390312 1458037 ~ 1458542 (-)
G25246 NA non-coding upstream 577151 2448427 ~ 2449619 (-)
G25256 NA non-coding upstream 777952 2649228 ~ 2649449 (-)
G25275 NA non-coding upstream 958261 2829537 ~ 2829747 (-)
G25276 NA non-coding upstream 1023439 2894715 ~ 2895109 (-)
G25277 NA non-coding upstream 1045636 2916912 ~ 2917542 (-)
cep89 NA other downstream 108015 1664770 ~ 1740839 (-)
LOC120556047 abcc12,LOC102304683,LOC101479372,LOC102203605 other downstream 206506 1587544 ~ 1642348 (-)
LOC120556048 abcc12,LOC101479372,LOC101076737,LOC102203605,LOC100701509,LOC102304683 other downstream 293208 1510165 ~ 1555646 (-)
LOC120555898 mctp2 other downstream 391746 1410674 ~ 1457108 (-)
pnoca NA other downstream 743687 1061104 ~ 1105167 (-)
G25228 NA other upstream 404199 2275475 ~ 2277091 (-)
LOC120556425 ap2a2,LOC104921433,LOC104965011 other upstream 3808766 5680042 ~ 5717433 (-)
LOC120555534 LOC103369663 other upstream 4284946 6156222 ~ 6167529 (-)
ankdd1a ankdd1a other upstream 4452001 6323277 ~ 6346561 (-)
pop4 pop4,LOC105418436,LOC104960843 other upstream 4637983 6509259 ~ 6524355 (-)

Expression


Co-expression Network