mpped2a (mpped2,LOC106524710,LOC102220360,LOC107083882,LOC100703837,LOC102192152,LOC107381839)
Chromosome Information
Item |
Value |
chromosome id |
NC_053114.1 |
NCBI id |
CM020911.1
|
chromosome length |
46923577 |
location |
39721272 ~ 39793912 (-) |
genome version |
GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
Sequence
>XM_039795871.1
GCGCGCGCACGGGAGGTGGCGGGGGTTGTGCTCGCTCttgctctctctgctctctgaccCCAGTGGCAGCTCCGACTCACTGCACTCCGGCTCCCCCTCCGTCAGACCGaggctgctctctctctcctgttgtcTGTCAGTGTCTCTCGCCCTCCATTCCGACTCTACTCCCCTTCGCTCTCTTGTCTGGGTTCTTTCCACGGGAGCCAGCCGAGGTCCCGCCGGGTCGAAGGTTCTGCCCTATCCACTCAGACTGCCGCAACCCCTGGACGGCCGCTAGGAATCTACCCGCTCTCCTGCTGCTGCCGCATGGACCCGCGTCCCTCCGccgctcctgctgctgctgctgctgccgccgcgTAGAGGGCGACCCCGACCCGACACTCTTTCTCCGGCCAGATACAAAACGCACAAAAACCCCACACGACGAAGACTGCAGTGTGTCGTGGTCGAGTTGGTCGGTCGggtcgctgctgctgctgctgctgctgctgctgctgggagacTTCCTGGGCTTCTTGAGCGGCTCTGAAGGATGACCGCTGCACGGCTCGCTGTTGAATCCCGGTGAACGAACGGCGTCTCATGTCCAAACGGCGGAAGGATGGCTCATGGCAAAGTGACCATCACGGTGGACGAGTACAGCTCCAACCCCACACAGGCCTTCACACATTACAACATCAACCAGAGCCGCTTCCAACCTCCACATGTCCACATGGTGGACCCCATTCCTTATGACACTCCCAAGCCAGCAGGACACaccaggtttgtgtgtgtgtccgacaCACACTCGCGTACAGACGGCATCCAGATGCCCTACGGCGACGTGCTGCTGCACATGGGTGACTTCACCGAGCTGGGCCTGCCCTCCGAGGTTAAGAAGTTCAACGACTGGCTAGGTGGCCTCCCGTATGAGTTTAAGGTGGTGATCGCCGGGAACCACGAGCTGACCTTTGATAAGGACTTTATGGCCGAGCTGGTCAAGCAGGATTACTACCGATTCCCCTCAGTGTCCAAACTCAAACCAGAGGACTTTGACAATGTCCAGACGCTCCTCACAAACTGTGTGTACCTGCAGGACTCGGACGTTACCATAAAGGGATTCAGGATATACGGGGCGCCATGGACTCCGTGGTTTAACGGCTGGGGGTTCAACCTGCCTCGGGGTCAGTCTCTGCTGGATAAATGGAACCTCGTCCCTGAAGGCATCGACATCCTGATGACCCACGGACCTCCGCTCGgtTTCCGAGACTGGGTCCCTAAGGAGCTGCAGCGGGTCGGCTGTGTGGAGCTGCTCAACACGGTCCAGAAGAGGGTGCGACCCAAACTTCATGCCTTCGGAGGCATACACGAAGGCTACGGGATCATGACCGACGGCTTCACGACGTTCATCAACGCGTCGACCTGCACTGTCAGCTTCCAGCCCACCAACCCCCCCATCGTGTTCGACCTGCCCAACCCCTCCAGCTCCTGAGACCAGAGGACGGGGGTCGGGAGGGTCGCGGGTGCGAGAaactacttcttttttttttctataaatatgtcaagttaaaaaaaaacaatgaaaaaaaactatgtgTTTCTTTGCAAACTTTTGATCTTCTCCAAGCTGTTGTTGAGATTGAGAAGATTTGGAGACGCGGGGCAGGGTGGGAAGTTTGTCTGGGAGGGTTAAAGGAGAATACcggtgttttattgtttttctaattGTGCCAGCAATGCTGGTTTCCCTCGTAGATTGTAGTTTTTCTACACACAGCGTTAGCGTAGTTGCAGATATCGGAGCTTGTTTCTTTCCAGAAGAACAAGAATGTTTTTCAATCTCATTTCAGTCTGAAAAACAACTTCCACAAAGGGAGATGACCCATGAAGAAACTTTGTCCTGATTTTATCGCGCAGAGTTGAGCATTTTTATACCAACGCAACTCAATGTTAGGTTCTGCTTCCTGTTAATCGAACATACGTTGCTATTGTGCAGAATGCCAGAAGAGAGCAATGACTCAaagtgctctttggatgcttttaaatagactttagtggtcccctaatactggatctgaagtctcttttaaatagaccttagtggtcccctaatactgtatctg
>XM_039795872.1
GTTTCTGTTCAGCCAGGATTCAGTGGAGTTGGAATAATGTCATTGCAATGTAAAgagcttctttttttgtgtgtgcaggaaTTGAGTTTAcccacctttttctttttctaggCTGGCATAAATCTTTCTGACTTAAATTCATAGCACATATCATAGGAAGTAGCATCCAGCTGACCCAGATAACATAAATCAATGCTTTTGTGAAAATAGGACAGTTTTTAGTTGGGAGGTTGTTTGCTTCAAGATATTCAACAACTGGAGGCCACagcttttcttgtcttttttttttaactcaaaactGCATCACTGGATTTAACCATCAAATGAACTCCAGAGCTTCTGATTACCCTCCAAAAATACGTCCGTTAAATTGAGAGcatttttccccccctttttctTGTGCTTGTGGCTGCATCAGGAGGTCTGGTATAAAAAGCCCACAGTGGCCACTTTACTATCAGTCAGGGAGGTCAGACAGAAGGGAAGCTCAGGGTTGCAAGGAGACACACAGCGAAGCCGGACTGCAGTGTGTCGTGGTCGAGTTGGTCGGTCGggtcgctgctgctgctgctgctgctgctgctgctgggagacTTCCTGGGCTTCTTGAGCGGCTCTGAAGGATGACCGCTGCACGGCTCGCTGTTGAATCCCGGTGAACGAACGGCGTCTCATGTCCAAACGGCGGAAGGATGGCTCATGGCAAAGTGACCATCACGGTGGACGAGTACAGCTCCAACCCCACACAGGCCTTCACACATTACAACATCAACCAGAGCCGCTTCCAACCTCCACATGTCCACATGGTGGACCCCATTCCTTATGACACTCCCAAGCCAGCAGGACACaccaggtttgtgtgtgtgtccgacaCACACTCGCGTACAGACGGCATCCAGATGCCCTACGGCGACGTGCTGCTGCACATGGGTGACTTCACCGAGCTGGGCCTGCCCTCCGAGGTTAAGAAGTTCAACGACTGGCTAGGTGGCCTCCCGTATGAGTTTAAGGTGGTGATCGCCGGGAACCACGAGCTGACCTTTGATAAGGACTTTATGGCCGAGCTGGTCAAGCAGGATTACTACCGATTCCCCTCAGTGTCCAAACTCAAACCAGAGGACTTTGACAATGTCCAGACGCTCCTCACAAACTGTGTGTACCTGCAGGACTCGGACGTTACCATAAAGGGATTCAGGATATACGGGGCGCCATGGACTCCGTGGTTTAACGGCTGGGGGTTCAACCTGCCTCGGGGTCAGTCTCTGCTGGATAAATGGAACCTCGTCCCTGAAGGCATCGACATCCTGATGACCCACGGACCTCCGCTCGgtTTCCGAGACTGGGTCCCTAAGGAGCTGCAGCGGGTCGGCTGTGTGGAGCTGCTCAACACGGTCCAGAAGAGGGTGCGACCCAAACTTCATGCCTTCGGAGGCATACACGAAGGCTACGGGATCATGACCGACGGCTTCACGACGTTCATCAACGCGTCGACCTGCACTGTCAGCTTCCAGCCCACCAACCCCCCCATCGTGTTCGACCTGCCCAACCCCTCCAGCTCCTGAGACCAGAGGACGGGGGTCGGGAGGGTCGCGGGTGCGAGAaactacttcttttttttttctataaatatgtcaagttaaaaaaaaacaatgaaaaaaaactatgtgTTTCTTTGCAAACTTTTGATCTTCTCCAAGCTGTTGTTGAGATTGAGAAGATTTGGAGACGCGGGGCAGGGTGGGAAGTTTGTCTGGGAGGGTTAAAGGAGAATACcggtgttttattgtttttctaattGTGCCAGCAATGCTGGTTTCCCTCGTAGATTGTAGTTTTTCTACACACAGCGTTAGCGTAGTTGCAGATATCGGAGCTTGTTTCTTTCCAGAAGAACAAGAATGTTTTTCAATCTCATTTCAGTCTGAAAAACAACTTCCACAAAGGGAGATGACCCATGAAGAAACTTTGTCCTGATTTTATCGCGCAGAGTTGAGCATTTTTATACCAACGCAACTCAATGTTAGGTTCTGCTTCCTGTTAATCGAACATACGTTGCTATTGTGCAGAATGCCAGAAGAGAGCAATGACTCAaagtgctctttggatgcttttaaatagactttagtggtcccctaatactggatctgaagtctcttttaaatagaccttagtggtcccctaatactgtatctg
>XM_039795873.1
cacaccgagtgCACACTGTCGTAAAGCATGCTGCACACAAATCGGCCTGCATTTGCACAAAAAAGAGAGCACATTTTccgtgaagcagcagcagtagtagtactTCAGGTTTTAGATTTTGCCTTGGGAGAAATGAGATGAAGTGTGTTCAAGGCATCTGACAGAGCAGCTTTTAACTGAAACTGCAGTGTGTCGTGGTCGAGTTGGTCGGTCGggtcgctgctgctgctgctgctgctgctgctgctgggagacTTCCTGGGCTTCTTGAGCGGCTCTGAAGGATGACCGCTGCACGGCTCGCTGTTGAATCCCGGTGAACGAACGGCGTCTCATGTCCAAACGGCGGAAGGATGGCTCATGGCAAAGTGACCATCACGGTGGACGAGTACAGCTCCAACCCCACACAGGCCTTCACACATTACAACATCAACCAGAGCCGCTTCCAACCTCCACATGTCCACATGGTGGACCCCATTCCTTATGACACTCCCAAGCCAGCAGGACACaccaggtttgtgtgtgtgtccgacaCACACTCGCGTACAGACGGCATCCAGATGCCCTACGGCGACGTGCTGCTGCACATGGGTGACTTCACCGAGCTGGGCCTGCCCTCCGAGGTTAAGAAGTTCAACGACTGGCTAGGTGGCCTCCCGTATGAGTTTAAGGTGGTGATCGCCGGGAACCACGAGCTGACCTTTGATAAGGACTTTATGGCCGAGCTGGTCAAGCAGGATTACTACCGATTCCCCTCAGTGTCCAAACTCAAACCAGAGGACTTTGACAATGTCCAGACGCTCCTCACAAACTGTGTGTACCTGCAGGACTCGGACGTTACCATAAAGGGATTCAGGATATACGGGGCGCCATGGACTCCGTGGTTTAACGGCTGGGGGTTCAACCTGCCTCGGGGTCAGTCTCTGCTGGATAAATGGAACCTCGTCCCTGAAGGCATCGACATCCTGATGACCCACGGACCTCCGCTCGgtTTCCGAGACTGGGTCCCTAAGGAGCTGCAGCGGGTCGGCTGTGTGGAGCTGCTCAACACGGTCCAGAAGAGGGTGCGACCCAAACTTCATGCCTTCGGAGGCATACACGAAGGCTACGGGATCATGACCGACGGCTTCACGACGTTCATCAACGCGTCGACCTGCACTGTCAGCTTCCAGCCCACCAACCCCCCCATCGTGTTCGACCTGCCCAACCCCTCCAGCTCCTGAGACCAGAGGACGGGGGTCGGGAGGGTCGCGGGTGCGAGAaactacttcttttttttttctataaatatgtcaagttaaaaaaaaacaatgaaaaaaaactatgtgTTTCTTTGCAAACTTTTGATCTTCTCCAAGCTGTTGTTGAGATTGAGAAGATTTGGAGACGCGGGGCAGGGTGGGAAGTTTGTCTGGGAGGGTTAAAGGAGAATACcggtgttttattgtttttctaattGTGCCAGCAATGCTGGTTTCCCTCGTAGATTGTAGTTTTTCTACACACAGCGTTAGCGTAGTTGCAGATATCGGAGCTTGTTTCTTTCCAGAAGAACAAGAATGTTTTTCAATCTCATTTCAGTCTGAAAAACAACTTCCACAAAGGGAGATGACCCATGAAGAAACTTTGTCCTGATTTTATCGCGCAGAGTTGAGCATTTTTATACCAACGCAACTCAATGTTAGGTTCTGCTTCCTGTTAATCGAACATACGTTGCTATTGTGCAGAATGCCAGAAGAGAGCAATGACTCAaagtgctctttggatgcttttaaatagactttagtggtcccctaatactggatctgaagtctcttttaaatagaccttagtggtcccctaatactgtatctg
Function
symbol |
description |
mpped2
|
Predicted to enable hydrolase activity. Acts upstream of or within glomerular visceral epithelial cell development. Is expressed in several structures, including immature eye; nervous system; neural keel; neural plate; and neural tube. Orthologous to human MPPED2 (metallophosphoesterase domain containing 2).
|
NR:
description |
PREDICTED: metallophosphoesterase MPPED2 |
GO:
id |
name |
namespace |
GO:0008152
|
metabolic process |
biological_process |
GO:0016787
|
hydrolase activity |
molecular_function |
KEGG: NA
RNA
RNA id |
representative |
length |
rna type |
GC content |
exon number |
start site |
end site |
XM_039795871.1 |
False |
2105 |
mRNA |
0.54 |
7 |
39721272 |
39793912 |
XM_039795872.1 |
True |
2193 |
mRNA |
0.49 |
7 |
39721272 |
39792622 |
XM_039795873.1 |
False |
1854 |
mRNA |
0.51 |
7 |
39721272 |
39792849 |
Neighbor
gene id |
symbol |
gene type |
direction |
distance |
location |
zdhhc13 |
zdhhc13
|
coding |
downstream |
74366 |
39629922 ~ 39646906 (-) |
nav2a |
nav2,LOC102790384
|
coding |
downstream |
240810 |
39362422 ~ 39480462 (-) |
htatip2 |
htatip2,LOC102791710
|
coding |
downstream |
405482 |
39308042 ~ 39315790 (-) |
prmt3 |
prmt3,LOC102792178,LOC102297811
|
coding |
downstream |
415343 |
39242675 ~ 39305929 (-) |
LOC120555936 |
nell1
|
coding |
downstream |
635808 |
38755925 ~ 39085464 (-) |
LOC120555276 |
LOC100703294,LOC107381837,LOC103366994,LOC102295725,LOC102215676,LOC101474681
|
coding |
upstream |
89024 |
39882936 ~ 39898517 (-) |
LOC120556430 |
LOC101156874,LOC103142636,LOC107083861
|
coding |
upstream |
108756 |
39902668 ~ 39910451 (-) |
slc22a18 |
slc22a18
|
coding |
upstream |
137394 |
39931306 ~ 39938866 (-) |
samd4a |
samd4a,LOC102311861
|
coding |
upstream |
451017 |
40244929 ~ 40313805 (-) |
LOC120556512 |
glg1,LOC100701703,LOC101472041,LOC108242135
|
coding |
upstream |
592185 |
40386097 ~ 40416063 (-) |
LOC120556195 |
NA
|
non-coding |
downstream |
67974 |
39647947 ~ 39653298 (-) |
G32828 |
NA
|
non-coding |
downstream |
113951 |
39543171 ~ 39607321 (-) |
G32751 |
NA
|
non-coding |
downstream |
479169 |
39241889 ~ 39242103 (-) |
G32749 |
NA
|
non-coding |
downstream |
483254 |
39237807 ~ 39238018 (-) |
G32742 |
NA
|
non-coding |
downstream |
593165 |
39127908 ~ 39128107 (-) |
G32912 |
NA
|
non-coding |
upstream |
36657 |
39830569 ~ 39913728 (-) |
G32922 |
NA
|
non-coding |
upstream |
149501 |
39943413 ~ 39946579 (-) |
G32923 |
NA
|
non-coding |
upstream |
150459 |
39944371 ~ 39947111 (-) |
LOC120556076 |
NA
|
non-coding |
upstream |
180941 |
39974853 ~ 39985779 (-) |
G32943 |
NA
|
non-coding |
upstream |
232222 |
40026134 ~ 40038460 (-) |
slc6a5 |
slc6a5
|
other |
downstream |
485526 |
39205275 ~ 39235746 (-) |
LOC120556344 |
lrrc49,LOC102795887
|
other |
downstream |
1894001 |
37788725 ~ 37827271 (-) |
ss18l2 |
ss18l2
|
other |
downstream |
2467846 |
37231141 ~ 37253426 (-) |
nod2 |
nod2
|
other |
downstream |
2829968 |
36883651 ~ 36891304 (-) |
cylda |
cyld
|
other |
downstream |
2838477 |
36859547 ~ 36882795 (-) |
LOC120556511 |
LOC102208128,LOC101468289
|
other |
upstream |
255712 |
40049624 ~ 40142048 (-) |
LOC120556146 |
NA
|
other |
upstream |
770329 |
40564241 ~ 40589664 (-) |
G33122 |
NA
|
other |
upstream |
854764 |
40648676 ~ 40662621 (-) |
LOC120556513 |
NA
|
other |
upstream |
867452 |
40661364 ~ 40663657 (-) |
sirt3 |
sirt3
|
other |
upstream |
1963715 |
41757627 ~ 41764896 (-) |
Expression