pcsk6 (pcsk6,LOC108237842)



Basic Information


Item Value
gene id pcsk6
gene name pcsk6,LOC108237842
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 6454631 ~ 6482010 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence


>XM_039795895.1
cattggCTGCAGCTGACAGCTCTGATCTGATCGCTCACACATAGCCCCGGTCGTTTCTACCGGAGTTTACCGGGACTGACCACAACATGATGGACTTATTAGACTTTCCCTCCAAAGCTGACCCAAAGATCCGACACCATCTGTATCTCCTCAACCGAGTTTTGTTTCCTAACTTGGGAGTCAGGATGGCTTTTTTCTTGCTTCTCATTATAGTAACTGTTGTTAGGAGTGAGTCAGTGGCTCCGGGACCCGGGAGCGTTTATACCAACCACTGGGCAGTGCGGATCCCAGGGGGCCGGGGACAGGCGGACAGGATCGCTGCTAAATATGGATACATCAACTTCGGACAGATAGGAAGTCTGGAGGACCATTACCATTTCCACCACAGCAGAGTGGTTCGCAGAGCGGCATACTCTTTGAAGGGCCCCCACAGCTTCATCCATATGGATCCTGAGGTGGCCTGGGCTGAGCAGCAGGTAGTAAAACCAAGAGTAAAGAGGTATGTCCAAAGTGACCCAAGcttcattcatttcaatgaCCCTAAATGGTCCAACATGTGGTACATTCACTGCAATGATAAGAGCAGCCGTTGTTGCTCAGAGATGAACATTCTGGAAGCCTGGCAGAGGGGCTACACCGGCAAGAACGTGGTGGTCACCATATTGGATGACGGCATCGAGAGGAACCACCCTGATCTGGCTCAGAACTATGACCATCTAGCAAGTTATGATGTCAATGGGAATGACCATGACCCTACACCACGTTATGACTCCCGCAATGAAAACATACATGGTACTCGGTGTGCAGGTCAAGTTGCAGCAGTGGCCAATAACTCCCACTGTGCCGTTGGGATTGCCTATAATGCTCGGATTGGAGGGATTCGGATGCTGGATGGCGATGTGACTGATTTGGTAGAGGCCATGTCCCTGGGAATCCGACCAGACTACATTGACATCTACAGTGCCAGCTGGGGCCCAAAAGACGATGGCAAGACGGTGGATGGCCCAGGGCCGCTAACTAAACAAGCTTTTGAACAAGGCATCAACAAGGGCCGCAAAGGCTTGGGGTCCATTTTTGTCTGGGCGTCAGGTAACGGGGGTCGCCAGGGTGATCACTGCTCATGTGACGGTTACACCAGCAGTATCTACACCATCTCCATCTCCAGCACCACAGAGAACGGAAACAAGCCCTGGTACCTGGAGGTGTGCAGCTCCATCATAGCCACAACTTACAGTAGTGGAGAGTTTAATGAGAGGAAGATTGTAACCACTGACCTGAGGCACCGCTGCACTGACGGTCATACTGGCACTTCTGTCTCTGCTCCTATTGTGGCCGCAATCATAGCTCTCGCTCTGGAAGCCAACCTTCTGCTGACATGGAGGGATGTGCAACATCTTCTGGTGAAGACATCCAGACCAGTCCACCTGAAAGCTGATGACTggaagaccaatgctgcaggatTCAGAGTCAGCCATTTGTATGGCTTTGGCCTGGTGGATGCAGAGGCCATGGTGCTGGAGGCCATGAAGTGGAGGACTGTTCCTGCTCAGCACACCTGCAGTCACACGCCCGAGCGACGCACCAGGCACATCCATGCTGGCCAACATATGAGCTGCAACATTAGCACTTCTGGGTGCTCAGGAGAGCCTGAGCAGCACGTGGCTTACCTGGAGCACGTGGTGGTCAAGGTCCTGATTGTCCACCCGCGGCGAGGAGACCTGGAGATCAACCTGATCTCTCCGTCTGGGACCAGGTCCCAGCTACTGGCCAACAGGTTGTTTGACAGTTCCAATGAGGGCTTCAGGAACTGGGAGTTCATGACAGTTCATTTCTGGGGTGAGAGGGCAGAGGGCACATGGACTCTGGAGATTGTTGACTCACCATCGAAGCTTCGCAACCCCGAGGTGCTGGGAAACCTGAAAGAATGGACACTGGTCCTTTATGGCACATCTCAGAACCCTTACCAGCCCAGCAGTGCTCAGCACTCTGGTTCAAGGATGGTGGAGATCCCAGCCACGGAGGAGATCCTGGAGGAGCCCGAGCTGGAGGAGGAAGACGAGTACAATGGGCAATGCCACAGTGAGTGTGGAGACCAGGGCTGCGACGGACCAGATAGTGACCACTGCCTCAACTGTGTCCACTTCAGCTCAGGCAGCTTGAAAAGTGGCAGAACCTGTGTAAGCCATTGTCCACTGGGACACTACGAGGACACAGCTTCCCGTCGCTGTAGACGCTGCTACAAAGGCTGTGAGAGATGTGTAGCCCGGTCAGCCGGTGATTGTCTCTCCTGTCGAAGAGGCCTGTTTCTCAACACACTCAACTCCAGCTGCATCGATACCTGTCCCCCAGGTTACTTTGCTGATGACAATCAGAGACAGTGTCTGAAGTGCCATAACACGTGTATGAGATGCCTGAGGTATGCAGACAGATGCACTGCCTGCAGCGAAGGCTACAGTCTTGCAGGGATGACTTGTGTTCCTGAATGCACCAATGGGACCTTTTTCCATTTGGAAGAGATGACCTGCAGCCCATGCCATTCCTCTTGTAGGACGTGTACAGGACCAGGTAAGGAGGAGTGTATCAAGTGTGCTGAGGGCTACCTGCAGCAGGAGTGGAGGTGTGTGGAAGCCTGTACTCCTGGCTACTACTCTGGAAAGGCAGCAGGAGTCCCTCATCAGATGTGTCATAGGTGTGAGGAAAACTGCCTGAGCTGCAGTGGAGCCGGAACAACTTGCACCAAATGCAAAGAGGGTTTTAGTCTGGTCAGCAGGACTTGTATTGTGAATGCATCCTGTAATAATGCTGACGAGGTTTTCTGTGAGATGGTCAAGTCCAACCGTCTCTGTGAGAAGAAGCTTTACCGTCAGTTCTGCTGCCGGACCTGTCTGATGAACGGATGAGGAGCCAAACACCACCCacacctccttctctctcactctcaatCTGTCTGAAGAAGACACAACAAGTGGAGTGTTACCATTTGGTCGAACCTACTTTATGTCTGTTACAAACTTCCATAAAGAACtaaagttcaattcaattcaattttatttatagtatcaaatcataacaagagttatctcaagacactttacagatagagtaggtctagaccacactctataatttgattgaatgtttcctaataatattgcctagaggaagcatataggaggagaatagaattggtccaagcactgagcctgtggaacaccatggctaactttagcgtgcttggaggatttattgttaatattaacaaattgagattgatcagagaaacaggacttaaaccagcttagtgcaattcctttaatgccaaataaatgttccaatctctgtaacaggatggtatggtcaatagtgtcgaatgcagcactaagatctaataagacaAGTATGGAGAGAAGTCCTTTGTCAGGACAAGTCACAAGTTACTCTTTATTTGTAAAGGGTATTCAACTTGTTTTCAAATGGTGGATGTCTCATTTTGGAATGATCTTCTGTTGTATTTTTACAGGTTCCTGAAGGCAGGTGTGATTTccataaaacattttgtaaacaGCAGTATGTGGAATGTGTATAAATATTCTGTACTGAACTTGAATGGTATAAACATGTACAAAACTACATTATAATGCATGTGCGTTTTACAATATGAAGTTTAACCGCTTTTAATCAAAGATAGTAAAGCATGGAGCTGCCACTTGTTTTATTTCTGGTTTATCAAATTAGATTGTCTTTCTCTGCCATTTCATGATCTCAGTTTAAAGTTCTGAGCTATTGTCTATTTCCCTTCTGTTTCagtgagtttttatttttttttattttgagctgAATATTTTCAGCTcagttaaaatgtaaataataaagCACACTTAGCTTTTAAAATCCA

Function


symbol description
pcsk6 Predicted to enable serine-type endopeptidase activity. Predicted to act upstream of or within proteolysis. Orthologous to human PCSK6 (proprotein convertase subtilisin/kexin type 6).

NR:

description
PREDICTED: proprotein convertase subtilisin/kexin type 6 isoform X1

GO: NA

KEGG:

id description
K08672 PCSK6; proprotein convertase subtilisin/kexin type 6

RNA


RNA id representative length rna type GC content exon number start site end site
XM_039795895.1 True 3895 mRNA 0.48 21 6454631 6482010

Neighbor


gene id symbol gene type direction distance location
plekho2 plekho2,LOC102775773 coding downstream 75553 6347189 ~ 6379078 (-)
znf414 NA coding downstream 133064 6315510 ~ 6321567 (-)
LOC120555542 NA coding downstream 173107 6278137 ~ 6281524 (-)
LOC120555535 NA coding downstream 212981 6234180 ~ 6241650 (-)
LOC120555536 NA coding downstream 261095 6183632 ~ 6193536 (-)
LOC120555473 NA coding upstream 24353 6506363 ~ 6508694 (-)
nadsyn1 nadsyn1 coding upstream 116665 6598675 ~ 6630288 (-)
ccdc102a ccdc102a coding upstream 365469 6847479 ~ 6901349 (-)
LOC120556364 NA coding upstream 488268 6970278 ~ 6982361 (-)
LOC120556367 LOC104932139,LOC100695351,LOC108237907,LOC102197162,LOC103129685,LOC106520888,LOC101465514,LOC103366349,LOC102224277 coding upstream 523832 7005842 ~ 7023172 (-)
G25795 NA non-coding downstream 48034 6406388 ~ 6406597 (-)
G25769 NA non-coding downstream 140424 6313983 ~ 6314207 (-)
G25759 NA non-coding downstream 143497 6253323 ~ 6311134 (-)
LOC120555540 LOC107712283,LOC107746645,LOC107663761,LOC107662224 non-coding downstream 243553 6209894 ~ 6211078 (-)
LOC120555539 NA non-coding downstream 328641 6123047 ~ 6125990 (-)
G25828 NA non-coding upstream 48157 6530167 ~ 6531894 (-)
G25837 NA non-coding upstream 114258 6596268 ~ 6596791 (-)
G25848 NA non-coding upstream 154238 6636248 ~ 6638362 (-)
G25851 NA non-coding upstream 159660 6641670 ~ 6641986 (-)
G25874 NA non-coding upstream 217422 6699432 ~ 6739014 (-)
ankdd1a ankdd1a other downstream 108070 6323277 ~ 6346561 (-)
LOC120555534 LOC103369663 other downstream 287102 6156222 ~ 6167529 (-)
LOC120556425 ap2a2,LOC104921433,LOC104965011 other downstream 737198 5680042 ~ 5717433 (-)
G25228 NA other downstream 4177540 2275475 ~ 2277091 (-)
cep89 NA other downstream 4713792 1664770 ~ 1740839 (-)
pop4 pop4,LOC105418436,LOC104960843 other upstream 27249 6509259 ~ 6524355 (-)
tpcn2 tpcn2 other upstream 52032 6534042 ~ 6590639 (-)
dok4 dok4,LOC102198948,LOC100694825,LOC102775855 other upstream 160154 6642164 ~ 6693331 (-)
lmnl3 LOC104943683 other upstream 848698 7330708 ~ 7344756 (-)
G26071 mex3b other upstream 1662197 8144207 ~ 8146901 (-)

Expression



Co-expression Network