cdh8 (cdh8)


Basic Information

Item Value
gene id cdh8
gene name cdh8
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 2842443 ~ 2961584 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039795904.1
GCAGAGCGGCATGCGTTCATTTGTGCGCCTGTTGACCCGGCTCCTCATCAACCCAATGAGCGCCGTGGAGGGGAGGCTCTCTTCGCCGCCGTGCatctctcctccatctcctcctcactTTTCCAGTCGGCCAGCAAGCCTGACGGAGCTCCTGCAACTACAACCCCAACACTGTCACTCCGCCTTGACAAACTGCAGGAAGGATTTCTAGCCTCTCCGCGTTTTGTTGCTCATTTCCCCCATCCGACTCGAATCAAACGCATTGGACTTTCTTTTGCGTATTttggagagaaaagaaaaaaagaaaaagaaacggTGAAACGATGCAGCAGCGGAAAAGGATGCAAGTCTCACTAGTCTCCCCCTCCGAATAACGCCAAATGGATGCTGTGCTGGGCTCCTCACCCCCTCACCAACTGCTATGGAGGCATGCCAAGCCATGCAAGTGACCTTTATCACGCCATGAATGCAAGCTCCGCCGTTCAAAGAGGACACAAGTAACCTTTTCTTGTTATCTAAGAAGGAGCTGTTGATCTGAAGAGAGAGGCGCTGGAAACGAGAGGCCGAGAGAGAAGAGACTCGTAAAAcaatcaaagaaaacaaacacacgACGACAGGATGCCAAAGCGGTCCGAGGAGATGCTGATGGATCTGTGGATGTCCTTGCTGCTGGTGTGGATTACTTGTGTTCCCTGCGTGTCTATGACTCCTATCATAGGCCAGTCCAAAAGTACACAAACTGGTGGGTCCGCAGCGGTGGCGAGTGGTCCTGGCGAAGGACAAAGATTACTGAGCCGCGCCAAGAGAGGATGGGTTTGGAATCAAATGTTTGTGCTGGAGGAATTTTCTGGACCCGATCCAATTCTAGTTGGCAGGCTACACACGGACTTGGATGTGGGCGGCAAGAACATTAAGTACGTCCTAGCGGGCGAGGGCGCAGGTACCATCTTCGCCATCAATGAACTAACGGGCGACATCCACGCCATGAAGAGGCTGGACCGCGAGGAGAAGGCCGAGTACACGCTAACAGCCCAGGTGGTTAACGCCGACACGGACGAGCCCTTGGAGCCGCCGTCTGAGTTCATCATCAAAGTCCAGGACATTAACGACAATCCGCCGCAGTTCAACGAAGGCCCGTACCGAGCCTCTGTTCCAGAAATGTCTGCCGTCGGTACCCCAGTTACCCGGGTAACAGCTACAGATGCTGATGATCCAGTGTACGGGAACAGCGCtaaactagtctacagcatacTGGAGGGACAACCATATTTCTCTGTAGACCCCAACTCTGCGACCATAAAAATCGCTCTTCATGGGATGGATCGGGAGATGAGAGAGGAGTACCTGGTGGTCATTCAGGCTAAGGACATGGGAGGACACATGGGGGGCTTGTCTGGAACTACGACTGTCACCGTCACGCTAACGGACATCAACGACAATCCACCAAAGTTCTCTAAAAGTTTGTATGAGTTTGTGATACCTGAAGACCTACCCATAGGGAAAATGGGCGGCAAGGTGAAGGCAAACGATAGAGACATCGGCGAAAATGCCAAGTCAACGTATAACATCATCGAGGGAGACGACCAAGGCATGTTCGAGATTGtcacagacatgcagacacaaGAAGGGATTCTACGACTGAAAAAGCCTGTAGACTACGAGACCAAGAGAGCCTTCACCCTGAAGGTTGAAGCCACCAACATCCGCTCGGAGCCCAGCAGTGGTGGGCCCTTCAAGGACACAGCTACAGTAAAGATCGTGATAGAAGACTCAGATGAACCTCCTGTTTTCGTCAAACCAGTGTATTTACTGGAAGTGAATGAGAACGCCCCCATCAACACGGTCATAGGGACAGTCACCGCCAGGGACCCAGACTCTACTGGAAGCCTCGTCAGGTACTTCATCGATCGGCACACGGACCTGGAGAGGCAGTTCAACATCAACGTGGACGATGGGAAGATCACACTGGCCAAACCGCTGGACCGGGAGACGGACATGTGGCACAACATCACAGTAACAGCCACAGAAGTCAGAAACCACAGTCAGATATCGAGGGCGATTGTGGCCATCAGAGTAATGGACATTAATGACAACGCCCCGGAGTTTGCCACCGAATACGAGGCCTTTCTGTGTGAAAATGGAAAACCTGGACAGGTGATCCAGACTGTCAGCGCGGTGGACAAAGACGACCCAATCCAGGGCCACTACTTTGACTACCGTCTAGTCCCGGAGATGCTCAACAACCCCAATTTCACCATCAAAAACAACCAAgACAATTCAATCAGTGTTTTGGCCAAGCACGATACCTTCCGGCGACAGAAACAGGAGATGTACTTCCTGCCAATCATTGTGACGGACAATGGGAATCCACCGATGAGCAGCACCAACACCTTGACCATCCGGGTCTGTGGGTGCAGTAAAGACGGCATTGTCCAGTCCTGTAACGTGGAGGCCTACGTCTTACCTATTGGCCTTAGTATGGGAGCTCTCATTGCCATCCTGGCCTGCATTATACTGCTGTTAGTAATAGTAGTACTATTTGTGACCCTGAGGAGACACAAGAATGAGCCTCTGATTATAAAGGATGATGAAGATGTGAGGGAGAATATTATCCGTTACGATGACGAAGGAGGCGGCGAGGAGGACACGGAGGCCTTCGACATCGCGACTCTGCAGAACCCGGACGGCATCAATGGTTACCTGCCACGCAAGGACATCAAGCCCGACCTGCAGTTTATGCCCCGAGCGGGACAGCACTCTGGCCCAAACGGCGTGGACGTGGACGAGTTCATCAATGTACGGCTCCATGAGGCAGACAATGATCCCACAGCACCGCCTTACGACTCTATCCAGATCTATGGATACGAGGGAAGGGGATCCATCGCCGGTTCCCTCAGCTCATTGGAGACGGCGTCGTCAGACTCGGACCAGAACTATGACTATCTCAGAGAGTGGGGCCCGCGCTTCAGAAGACTTGGGGAGCTCTACTCTGTGGGCGAGAGCGACCGCGAGACCTGACCTTTGGTctgttagaaaaaaaagaccTTTTCCGATTTCTTTCCTGTCCACATACTTGTGTATTAAACGCTAGGGGGTTCGCTGGCTTTTAGAAAcaggtgtttaaaaaaaaaaaaaaaaataaccattaATAACAAGGGAGGCCACCTTTTTGTATTCTTCTTAGAGTGAGGTATAGCAGTCGTCATCCACTACGTCAAGCGCATTGTAATTGTTGAGCCAAACAATGTCTTTATTAGGAGATCTATgattcttgtggagtgtaactTAGATTCCGTTGTGGAGTGTCTAACAGTATTTTGGGTGTTAGTGATTTGCTATGACTGCCAGTAGCAGAAAAACCCTGGGACTGCTGGTAGTTGCCCGATGAAAGGAAATCACGGATGTCGTTGGGTTCCCTGAAGCTTCAGCAGACACTCCATGCTCCATGGACAACAAGCTGGACCTCAGAAGCTGCAGAGAGACTCGTATTTCATGTCTGCCGAAGCCACCCAGCTGGCCGGTGATCTGAAACAAAGTGACAATGAAAAAGCAATATATGGTCTACATTAAAATGATGAATGTATGtatgatttgaaaaaaaagaaaaagcataaGACAAACCAGTATTGGCTTTAAGATGAATTTGTTATTATTTGATATGTTCTCTGGTGGCCACATTTATAAACTATCTAAAGCCCGGAAAGGCTTGCTTTATACAACTCTTTGTATTTACACGCTACAGGTGTGAGTCGCAAGTGTTACTAGCCTATAAAAGACTGAAGCGGagacaaaaaagagaaatgtaGAAACTCTGAGGCCTTCTTTTTACAGAAGCAACATTAAATACAATTGTAATCTACTGTTTTTTGACAAGAGATGTGTTGATTCTTCTTTCTTGTTCTATGagtttttgtatttctgttaTCTTAAATCACTTTTTCCTGTGCTGACAATTTATAGTGAGTGTGTTTAGATTATTTCACATTCAGCTGTTTTTTTCCAACCACTTGAATACTATTTCATAACAGTCAAACCATATCATGAATTTATTGCAGTTGATAATATAGATTAGATGTAAGCAAGCAAACACAAGCTCTAAGTTACTGTAACAACACAGATGATCAAATTAATTGGGACTGCAGGAATGGGACCTTTCTGACACATGCTAATTCTCTGTAACATATATCTCATAACATATTCTGAGGTACAGCCAGTGAGCGTCTGAGCACAATAGTCCAATTGATACCTGAGTATGTGACTATCTCCAAACATCAAATCTCATTTAGGAAACGCAGGTTGCAATTAGCCCAAGAAAAATGAAGACACAAATCTAGACCATGTGCATATTGTGCTTACACTGTAtgatatcaataaaaaaaaaagacttgtacTGTACATAGAGTTACTGCTAACGTCATTAGCTTTCAATGAGGTGGTAGGTTTGTCTCTGCACGTTAGCTCTTGCACATAATGAGAATTTCAATGGCACTACAGCCGCGTGCATACCCAGTTTGTactgatacagtattatggcTCGGTTCTCGGTAGACTAAACAATATATATGGAATAGTCCTACATGCAGATCATATTTTGTACTGTGCTTTAATGCTTATAAATGTGTATGTTCAATTATTTACTCCCTGTACTGTAATCTAAGATACCCTGTATTGTTTCCTACtttgtgaaatatatttttataaata
>XM_039795905.1
CAGAGCGGCATGCGTTCATTTGTGCGCCTGTTGACCCGGCTCCTCATCAACCCAATGAGCGCCGTGGAGGGGAGGCTCTCTTCGCCGCCGTGCatctctcctccatctcctcctcactTTTCCAGTCGGCCAGCAAGCCTGACGGAGCTCCTGCAACTACAACCCCAACACTGTCACTCCGCCTTGACAAACTGCAGGAAGGATTTCTAGCCTCTCCGCGTTTTGTTGCTCATTTCCCCCATCCGACTCGAATCAAACGCATTGGACTTTCTTTTGCGTATTttggagagaaaagaaaaaaagaaaaagaaacggTGAAACGATGCAGCAGCGGAAAAGGATGCAAGTCTCACTAGTCTCCCCCTCCGAATAACGCCAAATGGATGCTGTGCTGGGCTCCTCACCCCCTCACCAACTGCTATGGAGGCATGCCAAGCCATGCAAGTGACCTTTATCACGCCATGAATGCAAGCTCCGCCGTTCAAAGAGGACACAAGTAACCTTTTCTTGTTATCTAAGAAGGAGCTGTTGATCTGAAGAGAGAGGCGCTGGAAACGAGAGGCCGAGAGAGAAGAGACTCGTAAAAcaatcaaagaaaacaaacacacgACGACAGGATGCCAAAGCGGTCCGAGGAGATGCTGATGGATCTGTGGATGTCCTTGCTGCTGGTGTGGATTACTTGTGTTCCCTGCGTGTCTATGACTCCTATCATAGGCCAGTCCAAAAGTACACAAACTGGTGGGTCCGCAGCGGTGGCGAGTGGTCCTGGCGAAGGACAAAGATTACTGAGCCGCGCCAAGAGAGGATGGGTTTGGAATCAAATGTTTGTGCTGGAGGAATTTTCTGGACCCGATCCAATTCTAGTTGGCAGGCTACACACGGACTTGGATGTGGGCGGCAAGAACATTAAGTACGTCCTAGCGGGCGAGGGCGCAGGTACCATCTTCGCCATCAATGAACTAACGGGCGACATCCACGCCATGAAGAGGCTGGACCGCGAGGAGAAGGCCGAGTACACGCTAACAGCCCAGGTGGTTAACGCCGACACGGACGAGCCCTTGGAGCCGCCGTCTGAGTTCATCATCAAAGTCCAGGACATTAACGACAATCCGCCGCAGTTCAACGAAGGCCCGTACCGAGCCTCTGTTCCAGAAATGTCTGCCGTCGGTACCCCAGTTACCCGGGTAACAGCTACAGATGCTGATGATCCAGTGTACGGGAACAGCGCtaaactagtctacagcatacTGGAGGGACAACCATATTTCTCTGTAGACCCCAACTCTGCGACCATAAAAATCGCTCTTCATGGGATGGATCGGGAGATGAGAGAGGAGTACCTGGTGGTCATTCAGGCTAAGGACATGGGAGGACACATGGGGGGCTTGTCTGGAACTACGACTGTCACCGTCACGCTAACGGACATCAACGACAATCCACCAAAGTTCTCTAAAAGTTTGTATGAGTTTGTGATACCTGAAGACCTACCCATAGGGAAAATGGGCGGCAAGGTGAAGGCAAACGATAGAGACATCGGCGAAAATGCCAAGTCAACGTATAACATCATCGAGGGAGACGACCAAGGCATGTTCGAGATTGtcacagacatgcagacacaaGAAGGGATTCTACGACTGAAAAAGCCTGTAGACTACGAGACCAAGAGAGCCTTCACCCTGAAGGTTGAAGCCACCAACATCCGCTCGGAGCCCAGCAGTGGTGGGCCCTTCAAGGACACAGCTACAGTAAAGATCGTGATAGAAGACTCAGATGAACCTCCTGTTTTCGTCAAACCAGTGTATTTACTGGAAGTGAATGAGAACGCCCCCATCAACACGGTCATAGGGACAGTCACCGCCAGGGACCCAGACTCTACTGGAAGCCTCGTCAGGTACTTCATCGATCGGCACACGGACCTGGAGAGGCAGTTCAACATCAACGTGGACGATGGGAAGATCACACTGGCCAAACCGCTGGACCGGGAGACGGACATGTGGCACAACATCACAGTAACAGCCACAGAAGTCAGAAACCACAGTCAGATATCGAGGGCGATTGTGGCCATCAGAGTAATGGACATTAATGACAACGCCCCGGAGTTTGCCACCGAATACGAGGCCTTTCTGTGTGAAAATGGAAAACCTGGACAGGTGATCCAGACTGTCAGCGCGGTGGACAAAGACGACCCAATCCAGGGCCACTACTTTGACTACCGTCTAGTCCCGGAGATGCTCAACAACCCCAATTTCACCATCAAAAACAACCAAgACAATTCAATCAGTGTTTTGGCCAAGCACGATACCTTCCGGCGACAGAAACAGGAGATGTACTTCCTGCCAATCATTGTGACGGACAATGGGAATCCACCGATGAGCAGCACCAACACCTTGACCATCCGGGTCTGTGGGTGCAGTAAAGACGGCATTGTCCAGTCCTGTAACGTGGAGGCCTACGTCTTACCTATTGGCCTTAGTATGGGAGCTCTCATTGCCATCCTGGCCTGCATTATACTGCTGTTAGTAGTACTATTTGTGACCCTGAGGAGACACAAGAATGAGCCTCTGATTATAAAGGATGATGAAGATGTGAGGGAGAATATTATCCGTTACGATGACGAAGGAGGCGGCGAGGAGGACACGGAGGCCTTCGACATCGCGACTCTGCAGAACCCGGACGGCATCAATGGTTACCTGCCACGCAAGGACATCAAGCCCGACCTGCAGTTTATGCCCCGAGCGGGACAGCACTCTGGCCCAAACGGCGTGGACGTGGACGAGTTCATCAATGTACGGCTCCATGAGGCAGACAATGATCCCACAGCACCGCCTTACGACTCTATCCAGATCTATGGATACGAGGGAAGGGGATCCATCGCCGGTTCCCTCAGCTCATTGGAGACGGCGTCGTCAGACTCGGACCAGAACTATGACTATCTCAGAGAGTGGGGCCCGCGCTTCAGAAGACTTGGGGAGCTCTACTCTGTGGGCGAGAGCGACCGCGAGACCTGACCTTTGGTctgttagaaaaaaaagaccTTTTCCGATTTCTTTCCTGTCCACATACTTGTGTATTAAACGCTAGGGGGTTCGCTGGCTTTTAGAAAcaggtgtttaaaaaaaaaaaaaaaaataaccattaATAACAAGGGAGGCCACCTTTTTGTATTCTTCTTAGAGTGAGGTATAGCAGTCGTCATCCACTACGTCAAGCGCATTGTAATTGTTGAGCCAAACAATGTCTTTATTAGGAGATCTATgattcttgtggagtgtaactTAGATTCCGTTGTGGAGTGTCTAACAGTATTTTGGGTGTTAGTGATTTGCTATGACTGCCAGTAGCAGAAAAACCCTGGGACTGCTGGTAGTTGCCCGATGAAAGGAAATCACGGATGTCGTTGGGTTCCCTGAAGCTTCAGCAGACACTCCATGCTCCATGGACAACAAGCTGGACCTCAGAAGCTGCAGAGAGACTCGTATTTCATGTCTGCCGAAGCCACCCAGCTGGCCGGTGATCTGAAACAAAGTGACAATGAAAAAGCAATATATGGTCTACATTAAAATGATGAATGTATGtatgatttgaaaaaaaagaaaaagcataaGACAAACCAGTATTGGCTTTAAGATGAATTTGTTATTATTTGATATGTTCTCTGGTGGCCACATTTATAAACTATCTAAAGCCCGGAAAGGCTTGCTTTATACAACTCTTTGTATTTACACGCTACAGGTGTGAGTCGCAAGTGTTACTAGCCTATAAAAGACTGAAGCGGagacaaaaaagagaaatgtaGAAACTCTGAGGCCTTCTTTTTACAGAAGCAACATTAAATACAATTGTAATCTACTGTTTTTTGACAAGAGATGTGTTGATTCTTCTTTCTTGTTCTATGagtttttgtatttctgttaTCTTAAATCACTTTTTCCTGTGCTGACAATTTATAGTGAGTGTGTTTAGATTATTTCACATTCAGCTGTTTTTTTCCAACCACTTGAATACTATTTCATAACAGTCAAACCATATCATGAATTTATTGCAGTTGATAATATAGATTAGATGTAAGCAAGCAAACACAAGCTCTAAGTTACTGTAACAACACAGATGATCAAATTAATTGGGACTGCAGGAATGGGACCTTTCTGACACATGCTAATTCTCTGTAACATATATCTCATAACATATTCTGAGGTACAGCCAGTGAGCGTCTGAGCACAATAGTCCAATTGATACCTGAGTATGTGACTATCTCCAAACATCAAATCTCATTTAGGAAACGCAGGTTGCAATTAGCCCAAGAAAAATGAAGACACAAATCTAGACCATGTGCATATTGTGCTTACACTGTAtgatatcaataaaaaaaaaagacttgtacTGTACATAGAGTTACTGCTAACGTCATTAGCTTTCAATGAGGTGGTAGGTTTGTCTCTGCACGTTAGCTCTTGCACATAATGAGAATTTCAATGGCACTACAGCCGCGTGCATACCCAGTTTGTactgatacagtattatggcTCGGTTCTCGGTAGACTAAACAATATATATGGAATAGTCCTACATGCAGATCATATTTTGTACTGTGCTTTAATGCTTATAAATGTGTATGTTCAATTATTTACTCCCTGTACTGTAATCTAAGATACCCTGTATTGTTTCCTACtttgtgaaatatatttttataaata

Function

symbol description
cdh8 Orthologous to human CDH8 (cadherin 8).

NR:

description
cadherin-8-like isoform X2

GO: NA

KEGG:

id description
K06800 CDH8; cadherin 8, type 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039795904.1 True 4704 mRNA 0.47 12 2842443 2961584
XM_039795905.1 False 4697 mRNA 0.47 12 2842443 2961583

Neighbor

gene id symbol gene type direction distance location
itfg1 itfg1 coding downstream 803441 1872831 ~ 2039002 (-)
LOC120556324 neto2 coding downstream 971167 1848854 ~ 1871276 (-)
dnaja2a dnaja2 coding downstream 995521 1835088 ~ 1846922 (-)
trnat-agu_3 NA coding downstream 1009049 1833321 ~ 1833394 (-)
lrp3 lrp3 coding downstream 1010497 1818431 ~ 1831946 (-)
LOC120555903 NA coding upstream 201311 3162895 ~ 3163677 (-)
phospho2 phospho2,LOC100704477,LOC102197635,LOC101485115,LOC102782954 coding upstream 258186 3219770 ~ 3223756 (-)
slc7a6os slc7a6os,LOC102781591 coding upstream 347796 3309380 ~ 3317933 (-)
LOC120555482 NA coding upstream 358840 3320424 ~ 3347207 (-)
LOC120555905 NA coding upstream 398969 3360553 ~ 3373692 (-)
G25275 NA non-coding downstream 12696 2829537 ~ 2829747 (-)
G25256 NA non-coding downstream 192994 2649228 ~ 2649449 (-)
G25246 NA non-coding downstream 392824 2448427 ~ 2449619 (-)
G25113 NA non-coding downstream 1179957 1661728 ~ 1662486 (-)
G25112 NA non-coding downstream 1180746 1661359 ~ 1661697 (-)
G25280 NA non-coding upstream 8184 2969768 ~ 2970107 (-)
G25296 NA non-coding upstream 233733 3195317 ~ 3195764 (-)
LOC120555480 NA non-coding upstream 341388 3302972 ~ 3303855 (-)
G25391 NA non-coding upstream 501649 3463233 ~ 3463523 (-)
G25392 NA non-coding upstream 503759 3465343 ~ 3465660 (-)
G25228 NA other downstream 565352 2275475 ~ 2277091 (-)
cep89 NA other downstream 1101604 1664770 ~ 1740839 (-)
LOC120556047 abcc12,LOC102304683,LOC101479372,LOC102203605 other downstream 1200095 1587544 ~ 1642348 (-)
LOC120556048 abcc12,LOC101479372,LOC101076737,LOC102203605,LOC100701509,LOC102304683 other downstream 1286797 1510165 ~ 1555646 (-)
LOC120555898 mctp2 other downstream 1385335 1410674 ~ 1457108 (-)
LOC120556425 ap2a2,LOC104921433,LOC104965011 other upstream 2718458 5680042 ~ 5717433 (-)
LOC120555534 LOC103369663 other upstream 3194638 6156222 ~ 6167529 (-)
ankdd1a ankdd1a other upstream 3361693 6323277 ~ 6346561 (-)
pop4 pop4,LOC105418436,LOC104960843 other upstream 3547675 6509259 ~ 6524355 (-)
tpcn2 tpcn2 other upstream 3572458 6534042 ~ 6590639 (-)

Expression


Co-expression Network