LOC120556376


Basic Information

Item Value
gene id LOC120556376
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 40598769 ~ 40631125 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039795933.1
gaaagaggccAACATAAGCCACAGAGGCACAtgaaaaagaagaacaagagAGCAGCTGTAGGGAACATCTGACCATCCAGGACCAGACCCGAGGTCAGATCCAGGACCAGAGGCTGCACGAAGACCAGAATCCGGACCCAGACCAGGAGCAACCCAGTCCACCATGTCAGAGCCCATCAGAAGAAAAAGCTCCAGCAAGCAGCTCCTGCAGAACCTCATCAGTTTGACAGCTCAGCGGAGCCAGgaggatgctgaggaggtggaGCGGGAGCGAAGGAGGAGAGCCAGGGAGAcgcagagaggagaggggagtcCCTCATGGCCGGAGCCCCCCCAACACAACCAGCTCACACACCGCAACACAGAGTTGGACGAGGAGCTGAAGCCCAGATGTTGCATGGTTCTGGAGGAGGACGAGGGCTTCAGCGACTGGAGTCACAGGTTGGAGGGTCGTAATGAGCAGGATGTGCAGGATGACTGCAGGGCCAAAGTGCAGAGGCCTTCAACAAGACAGTGGAAACCAGAGCCTGGACAGGAGAAACAGCAGCAGAGTGAAGAGGACGAGAAGGGATGTGAGCCAGAACGAAGCAGTCGGTCACAGGAAGCTTTAACAAGACCTCCAGAGAAGATGTCCAGCAACAGATACAGCTCAACAGTCTTCCTGTCACAGGACGCCAGGCTGCAGCACGCCATGGGCCAACCAGCAGACAGGACGTCCTACCTGGTGGCCGGGACGATGAGGCCACGCGGAGGGGCACGCAGGGTGGATGGGGAGGTggagcagcaggagcagaagGAGGATGTAAAAGAGATGCAGGCTACTCTGCAGAGGGAGTGGACTTCAGCAGAAAGCCGACAGAGCCCCGGAGATGAAGATGACCAGGAGGAAGAAGAACTGAGCTTCACAAATGAAGAGAAGGATGACCTCCACctcaggagggaggaggaaggggaggagggggagcagCACAAGATGCCACACAAGAGCTCAATGGAGGGAAGGAGGAGTGAGGAGGTGAGCAGAAGATCTGCAGCCCCTCGTTGCAGCAGCAGCGAAGGCGAGGAGCTGTTAAACTACGGTCCCATGAGCCCGACATTCAAGAAACTCCTCATTCAGTTTTACCCAGATGAAGTGAACAGCAGAGTCTCAACAGACGGTAAATGCACGATCATAGAGAGAACCGAGTCTCTGAGGAaaagCACCAGCAACATAAAGAAGACGCTGCCACCTGTTGCTGTTTCCAAGATTGACAAGAAACTGGAGCAGTACACACATGCTCTTGAGGTCTCCTCAAAGGAAGGCAGATCAGCCAGTCAGCTGCTGCCAGACCTGATGAGTCCCACTGAAGCTGTCTCCTCCAAGAAGAGCCTGTTTGAGGCCGGAGAAGCCTGGAACCAAAACGCAATCTCAGTCACACCATCTAAGGATGCAGATGGTTTAAAAGTCGGTGTGGCTGATCTTATCAATCAGTGGGTGAAAGGAAGTGAAGATGGTAGCAGGTGCAGCTCGCCCTCCAGACCAGCAGACACAAAACCGGTTGGTGTTTCAAACAAGAAGTATTTATGGGAGAACCTCGGTGACACATTATCTTctggaagggaagggaagGAGAGCTCCACTGCTAAAAGATATAAGTTTGTGGTGACGGGTCACGGCAAGTATGAGAAGGTTTATGTGGACAACGACTGCAGTGAAGACGCAAACTGCCAGTCAGcTGGACAGTTCTATGACGATTTGTGAAACACATGCTGGACTTTGAAGAATTCtggattatgaaaaaaatattttttatcacttcaccATTCTCTGTATTTCAAGCTTAAGgttggaaatgtacttaaatcCTGTTGTAATGACACATTTATTGTGCCGCTtatcattttacaaaaaggTAGTGAAGCAAATTGTGagtctttatttttgtttatactTCGCAGTTATTCATTTTATCCTGTGAATAATAATCTCTGCCGTAGTACATCTTTTAATATGATGAATTAACTTCAATTAAACACATTCCTGATGTTTGATTCTTTAA
>XM_039795934.1
gaaagaggccAACATAAGCCACAGAGGCACAtgaaaaagaagaacaagagAGCAGCTGTAGGGAACATCTGACCATCCAGGACCAGACCCGAGGTCAGATCCAGGACCAGAGGCTGCACGAAGACCAGAATCCGGACCCAGACCAGGAGCAACCCAGTCCACCATGTCAGAGCCCATCAGAAGAAAAAGCTCCAGCAAGCAGCTCCTGCAGAACCTCATCAGTTTGACAGCTCAGCGGAGCCAGgaggatgctgaggaggtggaGCGGGAGCGAAGGAGGAGAGCCAGGGAGAcgcagagaggagaggggagtcCCTCATGGCCGGAGCCCCCCCAACACAACCAGCTCACACACCGCAACACAGAGTTGGACGAGGAGCTGAAGCCCAGATGTTGCATGGTTCTGGAGGAGGACGAGGGCTTCAGCGACTGGAGTCACAGGTTGGAGGGTCGTAATGAGCAGGATGTGCAGGATGACTGCAGGGCCAAAGTGCAGAGGCCTTCAACAAGACAGTGGAAACCAGAGCCTGGACAGGAGAAACAGCAGCAGAGTGAAGAGGACGAGAAGGGATGTGAGCCAGAACGAAGCAGTCGGTCACAGGAAGCTTTAACAAGACCTCCAGAGAAGATGTCCAGCAACAGATACAGCTCAACAGTCTTCCTGTCACAGGACGCCAGGCTGCAGCACGCCATGGGCCAACCAGCAGACAGGACGTCCTACCTGGTGGCCGGGACGATGAGGCCACGCGGAGGGGCACGCAGGGTGGATGGGGAGGTggagcagcaggagcagaagGAGGATGTAAAAGAGATGCAGGCTACTCTGCAGAGGGAGTGGACTTCAGCAGAAAGCCGACAGAGCCCCGGAGATGAAGATGACCAGGAGGAAGAAGAACTGAGCTTCACAAATGAAGAGAAGGATGACCTCCACctcaggagggaggaggaaggggaggagggggagcagCACAAGATGCCACACAAGAGCTCAATGGAGGGAAGGAGGAGTGAGGAGGTGAGCAGAAGATCTGCAGCCCCTCGTTGCAGCAGCAGCGAAGGCGAGGAGCTGTTAAACTACGGTCCCATGAGCCCGACATTCAAGAAACTCCTCATTCAGTTTTACCCAGATGAAGTGAACAGCAGAGTCTCAACAGACGGTAAATGCACGATCATAGAGAGAACCGAGTCTCTGAGGAaaagCACCAGCAACATAAAGAAGACGCTGCCACCTGTTGCTGTTTCCAAGATTGACAAGAAACTGGAGCAGTACACACATGCTCTTGAGGTCTCCTCAAAGGAAGGCAGATCAGCCAGTCAGCTGCTGCCAGACCTGATGAGTCCCACTGAAGCTGTCTCCTCCAAGAAGAGCCTGTTTGAGGCCGGAGAAGCCTGGAACCAAAACGCAATCTCAGTCACACCATCTAAGGATGCAGATGGTTTAAAAGTCGGTGTGGCTGATCTTATCAATCAGTGGGTGAAAGGAAGTGAAGATGGTAGCAGGTGCAGCTCGCCCTCCAGACCAGCAGTGAGTCCAATTTTTACCCTGAATGAACCAGGAttgtcttctcttcttcttctctttgcaTCATGATCTTGCAGTGTTGGACACAAAACCGGTTGGTGTTTCAAACAAGAAGTATTTATGGGAGAACCTCGGTGACACATTATCTTctggaagggaagggaag

Function

GO:

id name namespace
GO:0008144 drug binding molecular_function
GO:0019825 oxygen binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039795933.1 True 2039 mRNA 0.50 15 40598769 40631125
XM_039795934.1 False 1688 mRNA 0.54 13 40610568 40631125

Neighbor

gene id symbol gene type direction distance location
LOC120556512 glg1,LOC100701703,LOC101472041,LOC108242135 coding downstream 182706 40386097 ~ 40416063 (-)
samd4a samd4a,LOC102311861 coding downstream 284964 40244929 ~ 40313805 (-)
slc22a18 slc22a18 coding downstream 659903 39931306 ~ 39938866 (-)
LOC120556430 LOC101156874,LOC103142636,LOC107083861 coding downstream 688318 39902668 ~ 39910451 (-)
LOC120555276 LOC100703294,LOC107381837,LOC103366994,LOC102295725,LOC102215676,LOC101474681 coding downstream 700252 39882936 ~ 39898517 (-)
LOC120556133 NA coding upstream 17222 40648347 ~ 40652751 (-)
foxr1 NA coding upstream 35147 40666272 ~ 40671602 (-)
LOC120556279 atp6v0d1,LOC103462946,LOC107563463 coding upstream 41790 40672915 ~ 40682357 (-)
ndufs3 ndufs3 coding upstream 298345 40929470 ~ 40934556 (-)
ptpmt1 ptpmt1,LOC102795413 coding upstream 306690 40937815 ~ 40948565 (-)
G33109 NA non-coding downstream 34838 40562192 ~ 40563931 (-)
G33061 NA non-coding downstream 204066 40281473 ~ 40394703 (-)
G33068 NA non-coding downstream 263822 40331750 ~ 40334947 (-)
G33048 NA non-coding downstream 389994 40207391 ~ 40208775 (-)
G32952 NA non-coding downstream 549403 40048059 ~ 40049366 (-)
G33167 c1qtnf4,LOC102794664 non-coding upstream 287102 40918227 ~ 40918584 (-)
G33168 NA non-coding upstream 289209 40920334 ~ 40925054 (-)
G33196 NA non-coding upstream 305716 40936841 ~ 40937064 (-)
G33347 NA non-coding upstream 814404 41445529 ~ 41445742 (-)
G33368 NA non-coding upstream 929707 41560832 ~ 41565475 (-)
LOC120556146 NA other downstream 9105 40564241 ~ 40589664 (-)
LOC120556511 LOC102208128,LOC101468289 other downstream 456721 40049624 ~ 40142048 (-)
slc6a5 slc6a5 other downstream 1363023 39205275 ~ 39235746 (-)
LOC120556344 lrrc49,LOC102795887 other downstream 2771498 37788725 ~ 37827271 (-)
ss18l2 ss18l2 other downstream 3345343 37231141 ~ 37253426 (-)
G33122 NA other upstream 17551 40648676 ~ 40662621 (-)
LOC120556513 NA other upstream 30239 40661364 ~ 40663657 (-)
sirt3 sirt3 other upstream 1126502 41757627 ~ 41764896 (-)
G33711 NA other upstream 1768166 42399291 ~ 42402136 (-)
G33796 NA other upstream 2354098 42985223 ~ 42990770 (-)

Expression


Co-expression Network