trmt10c


Basic Information

Item Value
gene id trmt10c
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 21372157 ~ 21374142 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039795984.1
ATTTCACTACGACACATTACAGCGTGACACAGTTTCAACAACGTGACCTTCTATCTCCTAACATTTTACAAGCACGAGCGCCGTGACAAGTGGAAACAACGTCGGGACAATTTGGGACACAATATGCATATGGTACTTTGATGCTACATTTTCATGACGGTGGACAACGGAGAGAACCGCGTTGATTACACTTTTTGTTCCGTTTAAATTCATAAGGGACAGTCTTCCTCGTTGTAGTACTTTTGATACAGCTGCAGTTTAATATATGTTATCGCGATGTTACGGCTCTTCACTAACCAGGGCTTTTATGAACTCTGTAAATGCAGTCATTTTGTGGCATCCTGTGTTAGCAAGAGGCAAGTCATCAAGTCAAGCCAAGTCGGTGTTCTCCCAGTCTGCAGCGCCGGTCATCACCGACTAACGTTACACATCCCTGCTCGCCTCGTCAATACTGGGACCCCAGTATGGAACGACGCCTTCCAACCAAAAAGAGAGAAATCTGAGGCAATGCACACACTAGATCTGGACAAATGGAAATCTGTAATGAGAGCCCAAGCGGCATCAGAAGAGAAACAGCAAGTCAACGATGAAGAGGAAGCAAGTGATGAAGATGAAAACCTCAAAGATCCAGGTGGTGATTTAAAGGACAGTTCCTCCCTGGAGGCCACTCGGGATCTGGTTGCAATGTGGCGGCAAGCTGGGAAGCTCGTACCTCAAGAGATGACTGAAGAAGAGGTTCAGACGCTGGCAGGGCTCACCACCAAGTCCTCCAGGAAGAAGTACCTGAAGTACCTGGCCATCAAGGAGGGCCACAAAAGGGCCCGTAaggagaagcagcagcagaggaaggCAGAGAGGGAAGCCTCCATGGAGACGAGAAGAGGACGGGACAGTGATGCAGAGGACGACAGAGGACCTGAACTTAAAAACACATTGTTCCTCCAGTTCTGGGGGCGCACCCTGGACAAGCTCCTGGCCTGGAGGAGCGCCCAGGCCATGCTGTTCGATCAGCCTCTGGTGTTTGACATGAGCTATGAGTCCAACATGGCCAGGCGGGAGTTAGAGAACACCGTGTCCCAGCTGATGGAGGTTGAAGGGTGGAATCGGCGTGCCACAGAGCCCTACCACCTCCACTTTTGCAACCTGAAGGCGGACGGGGCCTACCAGAGCGAGCTGCTCAAACGATATGGTGCAGAAGCCTGGGACCGCCTGCTCATCACCACCTCTGACCAACAGCATGTGGATCTGTTCCCCCGCGAACAGCTCGTATACCTCACCGCAGATTCCCCCAACGTCCTCCGCAGGTATGACCACTCCAAGGTCTACATCATTGGAGCTCTAGTGGACAGGTCGATCCAGTCAGGCCTGTCACTGGCCAACGCCAAGCGTCTGAACCTGGCCACAGCCCGTCTGCCACTGGATGAGTTCCTCCACTGGGGAATAGGGGCCAAAAATCTGACTCTCGACCAGATGCTCCGCATCATGCTCACTTTCAAGGAGACTGGGAAATGGGAGGAGGCGTTGAAGTTCGTGCCTAAGAGGAAGTATGATGGCTTCCACCAACAACGGACACAGAAAGCGATTACCAAAAAGGTCAGGGGAGTCACAAATCCCGGACCAAGCCAGGATGGTGAAAGGTTGTTAAGATCTGGAGAAAGAAATGGTGAGAGGACATTTAAAAATCCGGGCCAAAGTCTTTACAGGTCCCATAAAGAGTCTGGGTTCAGTAGTAGAGACAGAATGGCTGCACTGCCCAGggacagagaaaacaaaccagCTGCAACCAGAGTACGGACATCATTTAAGAGCAACATGGAGGGAAGAAAAGGTCCAGGCAAAGGCAAGATGTGGTGGGGTGACGAGTGAAGGCAACAAAAATGTTGTAActtgggataaaaaaaaaaaggacatgtcTGTTTTACAAGCGCTGTCTGAGGAAATGTCAAAAACTGAGACGAGTTGTAAATAAAGTGTTGTGATAGGTA

Function

NR:

description
mitochondrial ribonuclease P protein 1-like isoform X1

GO: NA

KEGG:

id description
K17654 TRMT10C, MRPP1; mitochondrial ribonuclease P protein 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039795984.1 True 1985 mRNA 0.50 2 21372157 21374142

Neighbor

gene id symbol gene type direction distance location
nkpd1 LOC104962748 coding upstream 20093 21331153 ~ 21352064 (+)
LOC120556481 NA coding upstream 84183 21286843 ~ 21287974 (+)
LOC120555780 diaph3 coding upstream 679183 20504098 ~ 20692974 (+)
LOC120555422 pcdh20 coding upstream 925384 20442399 ~ 20446773 (+)
pou4f1 pou4f1,LOC103143517,LOC106914826 coding upstream 1754705 19614845 ~ 19617452 (+)
ercc5 ercc5,LOC104958986 coding downstream 7067 21381209 ~ 21390547 (+)
LOC120556135 tmem255b coding downstream 60117 21434259 ~ 21453303 (+)
adprhl1 adprhl1,LOC102790835 coding downstream 230975 21605117 ~ 21613287 (+)
grtp1a grtp1 coding downstream 240559 21614701 ~ 21626517 (+)
tgfbrap1 tgfbrap1 coding downstream 276603 21650745 ~ 21667717 (+)
G28804 NA non-coding upstream 50532 21321312 ~ 21321625 (+)
LOC120555568 NA non-coding upstream 228967 21142725 ~ 21143190 (+)
G28792 NA non-coding upstream 298402 21073541 ~ 21073755 (+)
G28778 NA non-coding upstream 545680 20826224 ~ 20826477 (+)
G28777 NA non-coding upstream 574486 20797412 ~ 20797671 (+)
LOC120556583 NA non-coding downstream 35510 21409652 ~ 21413209 (+)
G28875 NA non-coding downstream 241574 21615716 ~ 21616158 (+)
G28880 cul4a non-coding downstream 262389 21636531 ~ 21638081 (+)
G28976 NA non-coding downstream 344346 21718488 ~ 21718824 (+)
G28990 NA non-coding downstream 512447 21886589 ~ 21889549 (+)
G28770 NA other upstream 611010 20711104 ~ 20761147 (+)
LOC120555792 pcdh9,LOC102784100 other upstream 1378203 19772119 ~ 19993954 (+)
ercc3 ercc3 other upstream 1851939 19512356 ~ 19520218 (+)
G28581 NA other upstream 1884624 19487246 ~ 19487533 (+)
LOC120555697 NA other upstream 2285093 19074308 ~ 19087064 (+)
G28826 NA other downstream 22071 21396213 ~ 21403450 (+)
grk1a grk1 other downstream 46968 21421110 ~ 21433147 (+)
tpp2 tpp2 other downstream 151450 21525592 ~ 21562814 (+)
dcun1d2b dcun1d2,LOC102792160 other downstream 222189 21596331 ~ 21603906 (+)
gpc5a gpc5,LOC103365231 other downstream 345892 21720034 ~ 21872025 (+)

Expression


Co-expression Network