LOC120556426 (LOC102314239,LOC100696141,LOC102210596,LOC101484460,LOC106959120,LOC106925763,LOC103462259)


Basic Information

Item Value
gene id LOC120556426
gene name LOC102314239,LOC100696141,LOC102210596,LOC101484460,LOC106959120,LOC106925763,LOC103462259
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 5733290 ~ 5758249 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039796036.1
CTCCCCTCCACTACAGCTTCATAAACACCACAGCGTTTGGCTCGGTGTGCCAGTGCAGCTGCTGACTCCTACTGGAGCTACCGGAGTCTTCTACAGCTCGGAGAGACTGTCTTCCTTCTGGAGAACTAACTCAAGAAACAGGCATGCACGCCAACAAGTGTGGAGACCAGGGGTCACACAGAGGAAAGGCTTTTGACTCAGCAAACCGTGCTAATGAGGAGAAGCAGATCAGCAATGAAGTTACATTCAGTAAATGTGATGAGAACCTGGAAAACAGGAGCGTCTCCGCTGGAAGGCCCACCAGCTCAGAGAAAAGGGTTGCGACTATCATTTTCTCCCTGAAAAATGAAGTCGGTGGTCTCGTCAAAGCACTCAGGCTTTTCCAGgAAAAACACGTCAACCTTATTCATATTGAGTCCCGCAAGTCCCAACGAAGGAATTCAGACTTTGAGATCTTTGTGGATTGTGACACTGACCATGAACAGCTCAAGGAGCTGACTCAGCTGCTGAGGAAGCATACTGATATTGTTGAGATTACTCCATGTGAGGACTCCACTTTACCTGATGATGATATGGCCAGTGTGCCCTGGTTCCCTAAGAAGATCTCTGATTTGGATCTGTCTTCCAACAGGGTTCTGATGTACGGCTCTGAATTAGATGCCGATCATCCGGGATTTCAAGACAACATTTACcgtaaaagaagaaaatattttgctgatttggCTATGAGCTACAAAATTGGCGATCCTATTCTCCGTATCGACTTCACAACTGAGGAGGTGCGTACCTGGGGCGTGGTGTTCAGGGAGCTCAACAAGCTGTACCCCAGCCACGCCTGCAGGGAGTATCTGAACAACCTCCCTCTGCTGACCAAACACTGTAACTACAGCCAGGACAACATCCCCCAGCTGGAGGACGTCTCACACTTCCTCAAGGagcgCTCAGGCTTCATCATTCGGCCAGTAGCAGGGTACCTCTCCCCCAGAGACTTTCTAGCGGGTCTGGCCTTCAGAGTATTCCACTGCACTCAGTATGTCCGCCACAGCTCCGAGCCTTTGTATACACCTGAACCAGACACATGCCATGAGCTGCTGGGACACGTTCCTCTGCTTGCTGAGCCCAGCTTCGCCCAGTTCTCTCAAGAAATTGGTTTAGCATCGCTGGGAGCTTCAGATGATGCTGTACAGAAACTGGCCACgTGTTATTTCTTCACAGTGGAGTTTGGTCTATGTAAGCAGGATGGCAGGCTCAGGGCCTATGGAGCTGGACTCCTCTCCTCCATCAGTGAACTCCAGCATGCTTTGTCTGGCAAGGCCAATATCCTTCCGTTTGACCCCGTGGTGACCTGTAACCAGGAGTGCAAAATAACTACGTTCCAAGACGTTTACTTTGTTTCCGAGAGCTTTGAGGAAGCCAAGAACAAAATGAGGGAGTTTGCAAAGACCATTTGGCGTCCATTCACGGTACGCTACGACCCGTACACCCAGAGCGTGGACGTCCTGAAGGACACCAACAGCATCAATGACATGGTGAAAGACATCCGGCATGAGCTGGACATTGTAGAAGACGCCCTGAACCGACTCAACAAAGACCTGAGAGTCTGAGGGTCAGAAGAGGCTAGCTGGGGTTGAAAGGTTTGGGTGGGGACCAGTGGGTTGGGGCTGGGTATACATACCTAGGTGGGAGATTAGATGGTGATGGGGGGTTGGTGAGAATGGGTTTCACGAAACTAGGATACTGACCTTAATCCAAGAGGGATAGTTAGACTAAGCTGTAGTGATTCGATTATCTTGAGTAAAGTTATAATCATACAGCTCTCAGTGCCTCCTTCATGGGACAGGCCTGTAAGCTGCAGAGTGCACTTGGCCTCAAGTTAGCCTTACGCTCTCAAATCGCGTTTTTCTGTACTTACACTTGCTATTTTGAGTACATAGTGTGGTTACGCTGACGAAGTATGGCCAAATGCAGCGCACTATAAGTAACCGAATGCGGCACTTGAAACGGTGAAAACATTCAGTGTGGAATGCTGGAcactagggctgttggaacaaatACCGAAattcgaatataattcgaatagtaaaaaaaaacaatactattcgaatgctaaaattactatttgaatgtgacttttttttataaatatgtcagctaactttagctaatctccctcttctcaccTTGGCCTACCCGCATGTGTCACTCATGTCACGTCTTATGAAAAATAACttagcgggagtgagaaacacaaggcattgtgaggtctAAGGTAAGTACAACATTGCGGAGCTAACTTTACATacagagtaacgttagtacatggggagtgacaggctgcggctggaaatcgtAACGAGgacgggaaatagttttaacatgactttgaaATCGACCTCCACCGAGCCAAAGTTCTTATGTTGACATTAGTTAGCTCAttcttgttttctaactgcgtCGCAAGGTTTAGTAACAttagcttagctgggagcttcatggagaaagctaaagtttatgttagctgccctacagctgtcagagttactTCGACTTCATAGATTACAGTCtaatagctgtattctcagtaatgtgacaatctgcaagaaacaggttgcttataaatcactaaaatagtagtgacagcaccgtttggcttgGTTATTAATGCAGTTAGCATCGTTTGTTACTTacctagtttatgacaaatcgttTCGGCTGTCATCATTGTGCAACCGACCACCGTTAGCTTTaacaacagagccgcttcactacacttgttagataatgtttcattacagagttctctgttgatttgtgtttgtcgctggAAAATTAACGTAAACAAAGTTGCGTGCAGGTCCCCTCAAGGCCAGGCTAATgttagaagtccctctagtggacagaatgtgtaacaacaaccacatgcttgtagtggcattgacaatgcataagcctgagtatattatttaacaggctgcaattgagcattaaatatttgaatattattagaatataaaaaaatatcaaatggaATTGattgtattaaatgtattatagaggaagattgacagcttaCTGGACACTACTCTCGATCACTGGTCTACATAGCAACAGCTATGGGACCACCAATGTATTTTCAATATGTGACGGGCGAGGAAGGTGCAGTGGTTGTGAtttgaaacagagaaaaccGAACTTTACAAAGTTTTatcattgatttttatttttttttattacaacgTCATCATTTTACAACTCAAATCCATACACAATACAGgttgcaaaaaaacattttgattcaGCCTATCCCTCTACCCTTATCCCTTACCCCTTACACTACCCCCATCCCTCCCTCCACCTTCTTCCTTATGCCCCCAGCTCCCCTCCTTCCCTCCACCAACCACCATAATGATAATATCCACTCAAGGATATCATTCTTATCTAGTTAGAAGATCTTTTAACTTAGATATCAAATCTGTCAACATTGAAATCGTATCTGGTTGTGCATCATTGACTTGTGCTGAAGATAGTTCCAGGTaagaaatgtccaaaaaaaactcCAAGTCAGTGAGTACTTGAAATATCATATGAGGAGGGTTCCAACGTTGGAATATAATCATCTTGGCTGCAGTCAAGCCTGTTAGCCAGAGTTTGCGAGGTTTTTatacaaatgtaatttatacattgttgtgtgcCAATGAGGCAGTAATGCTCCACCTGGCTGCAATTTACCATTAAAAAAGAATGTGGAGAATAATTTCCAGTAAGTGCATAACAGCCGTGTTGAGACAACCCTACCCTGTCAAATGTTACTCACTACAAGTGAGTACATAGTGAACACAGTGTActgcatgtaaatgtactcaCAGAAGTATCCAAATTGAGACACACTTTGGTGTGGCAAGAAGgttcaatgttcaatgttcaatttatttataaagcacatattaatacaacaaaagttgaccacagtgctgtacaaaaaatacaataaaacaatcTTCAAGACAATTAAATTCCACTAGTAAATACTACTAAAATCCTATCACATCATTAACACAGCACTCATAGATAGAGGTTGGGACGGTATTTGGGGGGAGCTATGCTAAAACCTTGATAAAGTCACTAATCTCCACGTatttatggaataaaaaaaaaatctaacaaagTCCATCATTTAAGGGAATTACAGCCGGTCGATCCATAGTGTAAGTGTAACAAGTAATGTGAGTGCATAATTCTCTGATTGATTTCTATGGTCAAATATGACCATAACAATGCAGGAAATGTGGAGTGATAATGTCTTGCCTAAATGGGTAACTACAGTAGTTACTGTTGTAATTTATGTGATAGAATTTGAATAAATGTataataaagttaaaaataataaattaacatCAAAATCCTAATTTTGTTGCCACAATGTAGAAGTTAATGTCTAATGCTAAGCCAATTGACACTGTAAAGATGGATCCTGGTATTAAATGTTTCTGCTGACCGCT

Function

NR:

description
PREDICTED: tryptophan 5-hydroxylase 1-like

GO:

id name namespace
GO:0042427 serotonin biosynthetic process biological_process
GO:0009072 aromatic amino acid family metabolic process biological_process
GO:0055114 oxidation-reduction process biological_process
GO:0005506 iron ion binding molecular_function
GO:0004510 tryptophan 5-monooxygenase activity molecular_function
GO:0016597 amino acid binding molecular_function

KEGG:

id description
K00502 TPH1_2; tryptophan 5-monooxygenase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039796036.1 True 4499 mRNA 0.43 12 5733290 5758249

Neighbor

gene id symbol gene type direction distance location
LOC120555666 LOC104921432,LOC104957830,LOC107086796,LOC103149206,LOC102794467,LOC102201791,LOC101480916,LOC102288651 coding upstream 61267 5659480 ~ 5672023 (+)
zgc:162297 LOC103355515 coding upstream 79035 5642283 ~ 5654255 (+)
LOC120555425 NA coding upstream 1392002 4333065 ~ 4341288 (+)
LOC120555911 LOC102783822,LOC103462246,LOC106925612,LOC102294465 coding upstream 1479216 4163676 ~ 4254074 (+)
LOC120556182 LOC101467318,LOC102294465,LOC102206054,LOC108237897 coding upstream 1581226 3873032 ~ 4152064 (+)
LOC120556427 cd81,LOC103358449,LOC103379030 coding downstream 6294 5764543 ~ 5804822 (+)
LOC120555999 NA coding downstream 57785 5816034 ~ 5854489 (+)
zgc:153993 NA coding downstream 110806 5869055 ~ 5884023 (+)
ano1a ano1 coding downstream 159307 5917556 ~ 6021420 (+)
fadd NA coding downstream 268186 6026435 ~ 6032154 (+)
G25611 NA non-coding upstream 57302 5674366 ~ 5675988 (+)
G25593 NA non-coding upstream 100260 5630664 ~ 5633030 (+)
G25567 NA non-coding upstream 842294 4890727 ~ 4890996 (+)
G25541 NA non-coding upstream 1050820 4682124 ~ 4682470 (+)
G25498 NA non-coding upstream 1286376 4446595 ~ 4446914 (+)
G25663 NA non-coding downstream 104410 5862659 ~ 5862867 (+)
G25673 NA non-coding downstream 134472 5892721 ~ 5893025 (+)
G25675 NA non-coding downstream 152980 5911229 ~ 5912453 (+)
G25709 NA non-coding downstream 277207 6035456 ~ 6035789 (+)
G25710 NA non-coding downstream 278610 6036859 ~ 6037969 (+)
tshz3b tshz3 other upstream 896005 4793815 ~ 4837285 (+)
G25512 NA other upstream 1157645 4570373 ~ 4575645 (+)
G25431 NA other upstream 1947748 3784933 ~ 3785542 (+)
mmp15b mmp15,LOC104948393 other upstream 2215204 3481297 ~ 3518086 (+)
adamts18 adamts18 other upstream 3421133 2240414 ~ 2312157 (+)
G25708 NA other downstream 275960 6034209 ~ 6035193 (+)
LOC120555541 NA other downstream 504161 6262410 ~ 6289776 (+)
G25743 NA other downstream 528799 6287048 ~ 6288077 (+)
rwdd3 rwdd3 other downstream 624321 6382570 ~ 6395706 (+)
LOC120556365 LOC102793592,LOC103366350,LOC101487888,LOC102307622,LOC100694289 other downstream 1235707 6993956 ~ 7005678 (+)

Expression


Co-expression Network