ccsapb


Basic Information

Item Value
gene id ccsapb
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 30654191 ~ 30659961 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039796038.1
TCCTCAAGCGGGCGGAGCTAAGAGACGCAGCCTGTGATTAGCAGCACCGTGAAGGCCATCTGTTCTGCTCTGCTTCCGTGAAATCCGACACCAGCTGTTTTCCAGCTTGCCCTCTTTTGATTTCAGTTCAACATGGCGATCAAGAGGATCCGCTCGGAGTACATGAAGAAATTCAAAGACCCCAAATGGGAGACCTACACTAAGTGTTATGAGGAGATGCTGAAGTACAGGCTGACCCGCAGGCTGCTGGAGCAAACACACAACCCCTGGTTCTGGAGTGGCCCAGACAGTGATTCAGAGTCTGGAGAAAGAAGCCCCCCTCCTCCCAGCAAGAACCAGGCAGGGTCCGAGACCAGCAGAGACAGGATGGAGCCTGAGCTGGAGGAGTGTGAGGGGGCGAGGGTGGACagacagcaggagcagcagcagggcAGACCCATGCGGTCGGTACCCAGGCTTCCCATCCAAGAAGAGGAGAATGTGTCTGCTCGACAGTCTGCAGTCCATGGCGCACAGGTTGAAGGTGCCAAAGAGACAGGAGTactagaggaggagagagaggagcagcagACTCACAGGGAACAAGACAGAGCGAGAGACACTGGAGGATCCCGACTACAGCAAAGTAAACCCTCCAAATCCTCAAAGCAAACATGGCGCTCCCAGCGGGTCAGACCTGCACCCACACGGCAGCCCGGGGATGACGGTAAGGAGAGCAGGCATCCGTTTGCTCTGTACGCTTCAGGAGAGAAGAATTCAAACATGGCAAGCAAGAAGACCCACAATGTTGGCCCTGCAGCTTCGACTACTGAGATCCATGAGTCGGCTCTTCGTGCAAAGACCAGGCGGGAAGTGGAGCACCAGATCCAGACCCAGAAGACCGAGCGCCGGAGAGCCAAGTCTGCCGATCTGGACAAGGCCAGAAAGTTGGTTCAACCAGAATTCAACCCCTGGCTCACTGAGTACATGCGCTCCTTCTCAGCTCGCTCCCgataggacacacacacgcacactctcacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacagtagaaaTACTTACATCAGGTGTGATTCCAGACAAAACATAAAGCCATTATTGCCTTCCACCACTGAAGTTTAAATACCCATAGATGTAAAATAGAGCATGGGGTGGATTGATTTATACAAACGATCCAAAATTTGTGTCACTCTCACATTCAGGGTGTAAACTGATACAACTTTGAAATACACTGTGTGGCTTATTCCCCCAGATGTGTACTGTCATGTTTTTAATACATACAATAAGAATCATTTTACAGAGTATAAGATACTCTTGAAAGTAAATGTATAATAAATAGATTCATCTACCACATACAGATATTTTGATTAGAATGAAGAAGCATTTTACAGCCATACTTTGATGCAGTCCCTTTAAACATACAGCTATGTAAAatgtgtccatgtttttttatacaGGGATATCAAACCATAGTGGACTCACACAGGAGTTATGAAAACACATGGCAGCATGTCTGATTAGACCCagccacatttttcaaaacacatgAAATGTGAGACCACAAACATGAAGAATACACTTATTGTATTCACATATTAACAAAACCAAACAGTCAAAATGTTTGTATTCCACAAAGTTCTGCTAAGCACAGCAAGATGGCTCAACCAACTGAAAGTTTTTCTTAAATGTATGCAGCTTTACAGTACAAAGTATTGATTGTCTGACAGAAAtacctctgtctgtttgtttaagATTTTTACAGCTTTTGATTTTCAGATCACTTAGCGCTGTGAACTGGTTCTTGTAGATTGAATGGTTTGTTGAACGGTTAATGGACTGAGCCTCACTGACTTGGTTTAGATGAAGAGGGAATCACACTCCGtacacacagtcaaacacacCTCTGTGTAAAATCACAGTTGTGTGATGTGGCACATTTTCCGCAACGAGGGCTCGGGTGAACAGCCAGACATCGACTGGCAAGtgaacagacatttatttcaaCCCCAAAGTACTTctcaaaaataaatgtgttaatgTAATCAATTAACCTGGTGAGATTGCAGTGTGaaaatagatgtgtgtgtgtgtgacttttaaAGCCATTGGATGACTGTGAAATGTATTTCTGTTAAACATTCACTGGCCATGGGACTCTTTCCACCATAACATGTAACATGAATTATGACGTACAGCTAATGTAGTTTCTTTTGTTGaggtaaacatttatttatcattACTGTCACTGAATATGCTTTAGAACCAAAAGAGGAACCATAATAACAATGGACATTAAGCTGACGCCTAAATGAAATACATGAGTACATATTGCTGATTTACTGCTTACTTGTTAAAGTAGCATACACTCTGAAGCAGGACCAAATCAATATGCACTTTGATAATTAGTCACCTTTCTGAAATAATATTTGACCAGAATACCTGGCTACCGATTtagattgtttattttttgaatctgtgtatatttgtttgtatgtgtgtagttGTATGTTTGTAACATCAGACATTGTTATTTGTAATTACACAAGAAGACAAAAATGGACTTTGAATCCTTTGTGCAATGGATCTGCCTGTCTTTTCATCATCCAAACCAAGATCAATCAGATCCCTCTTGAGTTCCTTGTGTCAGTTATCATGATAAAATCATTTCTGTGCCATGAA
>XM_039796039.1
TTTAAAAACGTCCTCAAGCGGGCGGAGCTAAGAGACGCAGCCTGTGATTAGCAGCACCGTGAAGGCCATCTGTTCTGCTCTGCTTCCGTGAAATCCGACACCAGCTTCAACATGGCGATCAAGAGGATCCGCTCGGAGTACATGAAGAAATTCAAAGACCCCAAATGGGAGACCTACACTAAGTGTTATGAGGAGATGCTGAAGTACAGGCTGACCCGCAGGCTGCTGGAGCAAACACACAACCCCTGGTTCTGGAGTGGCCCAGACAGTGATTCAGAGTCTGGAGAAAGAAGCCCCCCTCCTCCCAGCAAGAACCAGGCAGGGTCCGAGACCAGCAGAGACAGGATGGAGCCTGAGCTGGAGGAGTGTGAGGGGGCGAGGGTGGACagacagcaggagcagcagcagggcAGACCCATGCGGTCGGTACCCAGGCTTCCCATCCAAGAAGAGGAGAATGTGTCTGCTCGACAGTCTGCAGTCCATGGCGCACAGGTTGAAGGTGCCAAAGAGACAGGAGTactagaggaggagagagaggagcagcagACTCACAGGGAACAAGACAGAGCGAGAGACACTGGAGGATCCCGACTACAGCAAAGTAAACCCTCCAAATCCTCAAAGCAAACATGGCGCTCCCAGCGGGTCAGACCTGCACCCACACGGCAGCCCGGGGATGACGGTAAGGAGAGCAGGCATCCGTTTGCTCTGTACGCTTCAGGAGAGAAGAATTCAAACATGGCAAGCAAGAAGACCCACAATGTTGGCCCTGCAGCTTCGACTACTGAGATCCATGAGTCGGCTCTTCGTGCAAAGACCAGGCGGGAAGTGGAGCACCAGATCCAGACCCAGAAGACCGAGCGCCGGAGAGCCAAGTCTGCCGATCTGGACAAGGCCAGAAAGTTGGTTCAACCAGAATTCAACCCCTGGCTCACTGAGTACATGCGCTCCTTCTCAGCTCGCTCCCgataggacacacacacgcacactctcacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacagtagaaaTACTTACATCAGGTGTGATTCCAGACAAAACATAAAGCCATTATTGCCTTCCACCACTGAAGTTTAAATACCCATAGATGTAAAATAGAGCATGGGGTGGATTGATTTATACAAACGATCCAAAATTTGTGTCACTCTCACATTCAGGGTGTAAACTGATACAACTTTGAAATACACTGTGTGGCTTATTCCCCCAGATGTGTACTGTCATGTTTTTAATACATACAATAAGAATCATTTTACAGAGTATAAGATACTCTTGAAAGTAAATGTATAATAAATAGATTCATCTACCACATACAGATATTTTGATTAGAATGAAGAAGCATTTTACAGCCATACTTTGATGCAGTCCCTTTAAACATACAGCTATGTAAAatgtgtccatgtttttttatacaGGGATATCAAACCATAGTGGACTCACACAGGAGTTATGAAAACACATGGCAGCATGTCTGATTAGACCCagccacatttttcaaaacacatgAAATGTGAGACCACAAACATGAAGAATACACTTATTGTATTCACATATTAACAAAACCAAACAGTCAAAATGTTTGTATTCCACAAAGTTCTGCTAAGCACAGCAAGATGGCTCAACCAACTGAAAGTTTTTCTTAAATGTATGCAGCTTTACAGTACAAAGTATTGATTGTCTGACAGAAAtacctctgtctgtttgtttaagATTTTTACAGCTTTTGATTTTCAGATCACTTAGCGCTGTGAACTGGTTCTTGTAGATTGAATGGTTTGTTGAACGGTTAATGGACTGAGCCTCACTGACTTGGTTTAGATGAAGAGGGAATCACACTCCGtacacacagtcaaacacacCTCTGTGTAAAATCACAGTTGTGTGATGTGGCACATTTTCCGCAACGAGGGCTCGGGTGAACAGCCAGACATCGACTGGCAAGtgaacagacatttatttcaaCCCCAAAGTACTTctcaaaaataaatgtgttaatgTAATCAATTAACCTGGTGAGATTGCAGTGTGaaaatagatgtgtgtgtgtgtgacttttaaAGCCATTGGATGACTGTGAAATGTATTTCTGTTAAACATTCACTGGCCATGGGACTCTTTCCACCATAACATGTAACATGAATTATGACGTACAGCTAATGTAGTTTCTTTTGTTGaggtaaacatttatttatcattACTGTCACTGAATATGCTTTAGAACCAAAAGAGGAACCATAATAACAATGGACATTAAGCTGACGCCTAAATGAAATACATGAGTACATATTGCTGATTTACTGCTTACTTGTTAAAGTAGCATACACTCTGAAGCAGGACCAAATCAATATGCACTTTGATAATTAGTCACCTTTCTGAAATAATATTTGACCAGAATACCTGGCTACCGATTtagattgtttattttttgaatctgtgtatatttgtttgtatgtgtgtagttGTATGTTTGTAACATCAGACATTGTTATTTGTAATTACACAAGAAGACAAAAATGGACTTTGAATCCTTTGTGCAATGGATCTGCCTGTCTTTTCATCATCCAAACCAAGATCAATCAGATCCCTCTTGAGTTCCTTGTGTCAGTTATCATGATAAAATCATTTCTGTGCCATGAA
>XM_039796040.1
ATatttactgtaggcctacatataTTTAGACTCTTCAGCCCTGAATTTCTGCTGTCAAGCCTTGCACTGTTATAGATGAGAGTCGATGGATTGTCAGTGAGATTTCACGTTTAGGCTATTTTCTGCGAGCGCTGACAGGCGATTATCGGTGCTCCATGTTACCATATGATTAACAGACATCTATAAATAACAGGAGACAATATGGAGCAACGGGCAAATGTTTAACCAGTAGCCAGATATTATCACTAATACGGTGTTATAGGCTGATGTCCTAGACGACGATTTAATACACGCTTATTTTAAAGCCTTTGATTCCAAAATATCGTATTTCAGCAATAAGGAAATCGGGTTGTGATGATTTATAGCACAACAGGTATAAAGCTTGGAGTGCTTTCATACAGTGATTACGGCTAACCTTTAATTTGGAATATTCAACAGTCGTGCCTGGAGCCAATCAGATGACGAGATGTCACCTACGTCATCGCGTTCAAGAAACGTCTGCTTTTAGCGGCCGAATTCAAAATTAATTCAgccaattttatttttgttatagtAAAACGGCGATTGAATTTACAGAGGGAACGTCCCAGTTGTTCAACATGGCGATCAAGAGGATCCGCTCGGAGTACATGAAGAAATTCAAAGACCCCAAATGGGAGACCTACACTAAGTGTTATGAGGAGATGCTGAAGTACAGGCTGACCCGCAGGCTGCTGGAGCAAACACACAACCCCTGGTTCTGGAGTGGCCCAGACAGTGATTCAGAGTCTGGAGAAAGAAGCCCCCCTCCTCCCAGCAAGAACCAGGCAGGGTCCGAGACCAGCAGAGACAGGATGGAGCCTGAGCTGGAGGAGTGTGAGGGGGCGAGGGTGGACagacagcaggagcagcagcagggcAGACCCATGCGGTCGGTACCCAGGCTTCCCATCCAAGAAGAGGAGAATGTGTCTGCTCGACAGTCTGCAGTCCATGGCGCACAGGTTGAAGGTGCCAAAGAGACAGGAGTactagaggaggagagagaggagcagcagACTCACAGGGAACAAGACAGAGCGAGAGACACTGGAGGATCCCGACTACAGCAAAGTAAACCCTCCAAATCCTCAAAGCAAACATGGCGCTCCCAGCGGGTCAGACCTGCACCCACACGGCAGCCCGGGGATGACGGTAAGGAGAGCAGGCATCCGTTTGCTCTGTACGCTTCAGGAGAGAAGAATTCAAACATGGCAAGCAAGAAGACCCACAATGTTGGCCCTGCAGCTTCGACTACTGAGATCCATGAGTCGGCTCTTCGTGCAAAGACCAGGCGGGAAGTGGAGCACCAGATCCAGACCCAGAAGACCGAGCGCCGGAGAGCCAAGTCTGCCGATCTGGACAAGGCCAGAAAGTTGGTTCAACCAGAATTCAACCCCTGGCTCACTGAGTACATGCGCTCCTTCTCAGCTCGCTCCCgataggacacacacacgcacactctcacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacagtagaaaTACTTACATCAGGTGTGATTCCAGACAAAACATAAAGCCATTATTGCCTTCCACCACTGAAGTTTAAATACCCATAGATGTAAAATAGAGCATGGGGTGGATTGATTTATACAAACGATCCAAAATTTGTGTCACTCTCACATTCAGGGTGTAAACTGATACAACTTTGAAATACACTGTGTGGCTTATTCCCCCAGATGTGTACTGTCATGTTTTTAATACATACAATAAGAATCATTTTACAGAGTATAAGATACTCTTGAAAGTAAATGTATAATAAATAGATTCATCTACCACATACAGATATTTTGATTAGAATGAAGAAGCATTTTACAGCCATACTTTGATGCAGTCCCTTTAAACATACAGCTATGTAAAatgtgtccatgtttttttatacaGGGATATCAAACCATAGTGGACTCACACAGGAGTTATGAAAACACATGGCAGCATGTCTGATTAGACCCagccacatttttcaaaacacatgAAATGTGAGACCACAAACATGAAGAATACACTTATTGTATTCACATATTAACAAAACCAAACAGTCAAAATGTTTGTATTCCACAAAGTTCTGCTAAGCACAGCAAGATGGCTCAACCAACTGAAAGTTTTTCTTAAATGTATGCAGCTTTACAGTACAAAGTATTGATTGTCTGACAGAAAtacctctgtctgtttgtttaagATTTTTACAGCTTTTGATTTTCAGATCACTTAGCGCTGTGAACTGGTTCTTGTAGATTGAATGGTTTGTTGAACGGTTAATGGACTGAGCCTCACTGACTTGGTTTAGATGAAGAGGGAATCACACTCCGtacacacagtcaaacacacCTCTGTGTAAAATCACAGTTGTGTGATGTGGCACATTTTCCGCAACGAGGGCTCGGGTGAACAGCCAGACATCGACTGGCAAGtgaacagacatttatttcaaCCCCAAAGTACTTctcaaaaataaatgtgttaatgTAATCAATTAACCTGGTGAGATTGCAGTGTGaaaatagatgtgtgtgtgtgtgacttttaaAGCCATTGGATGACTGTGAAATGTATTTCTGTTAAACATTCACTGGCCATGGGACTCTTTCCACCATAACATGTAACATGAATTATGACGTACAGCTAATGTAGTTTCTTTTGTTGaggtaaacatttatttatcattACTGTCACTGAATATGCTTTAGAACCAAAAGAGGAACCATAATAACAATGGACATTAAGCTGACGCCTAAATGAAATACATGAGTACATATTGCTGATTTACTGCTTACTTGTTAAAGTAGCATACACTCTGAAGCAGGACCAAATCAATATGCACTTTGATAATTAGTCACCTTTCTGAAATAATATTTGACCAGAATACCTGGCTACCGATTtagattgtttattttttgaatctgtgtatatttgtttgtatgtgtgtagttGTATGTTTGTAACATCAGACATTGTTATTTGTAATTACACAAGAAGACAAAAATGGACTTTGAATCCTTTGTGCAATGGATCTGCCTGTCTTTTCATCATCCAAACCAAGATCAATCAGATCCCTCTTGAGTTCCTTGTGTCAGTTATCATGATAAAATCATTTCTGTGCCATGAA

Function

NR:

description
centriole, cilia and spindle-associated protein-like isoform X1

GO:

id name namespace
GO:0003341 cilium movement biological_process
GO:0048513 animal organ development biological_process
GO:0048523 negative regulation of cellular process biological_process
GO:0007399 nervous system development biological_process

KEGG:

id description
K16454 CCSAP; centriole, cilia and spindle-associated protein

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039796038.1 False 2775 mRNA 0.44 5 30654191 30659951
XM_039796039.1 False 2754 mRNA 0.44 5 30654191 30659961
XM_039796040.1 True 3242 mRNA 0.42 5 30654191 30659850

Neighbor

gene id symbol gene type direction distance location
phf10 phf10 coding downstream 8166 30635173 ~ 30646025 (-)
psmb1 psmb1 coding downstream 19552 30631711 ~ 30634639 (-)
LOC120555751 tbp coding downstream 26866 30618857 ~ 30627325 (-)
rhoua rhou,LOC108237402,LOC107381884 coding downstream 43233 30606647 ~ 30610958 (-)
mis12 mis12 coding downstream 85617 30566790 ~ 30568574 (-)
acta1b acta1,LOC102689871,LOC100534413 coding upstream 1225 30661186 ~ 30665260 (-)
abcb10 abcb10,LOC102798660 coding upstream 9918 30669879 ~ 30685199 (-)
LOC120555418 LOC104920151,LOC107092146,LOC106958996,LOC106906464 coding upstream 155435 30815396 ~ 30827693 (-)
adpgk2 LOC104966691,LOC103371218 coding upstream 195213 30855174 ~ 30867292 (-)
ctsba ctsb coding upstream 207813 30867774 ~ 30876711 (-)
G31110 NA non-coding downstream 68735 30569887 ~ 30585456 (-)
G31115 NA non-coding downstream 74887 30578286 ~ 30579304 (-)
G31027 LOC104955499,LOC103375803 non-coding downstream 229868 30421690 ~ 30424323 (-)
G31024 NA non-coding downstream 244135 30408105 ~ 30410056 (-)
G31013 hk1,LOC101156878,LOC107381906,LOC106513162,LOC102780719 non-coding downstream 310289 30343416 ~ 30343902 (-)
G31146 NA non-coding upstream 39442 30699403 ~ 30726354 (-)
G31150 NA non-coding upstream 109622 30769583 ~ 30769809 (-)
G31155 NA non-coding upstream 122449 30782410 ~ 30785228 (-)
G31274 NA non-coding upstream 381587 31041548 ~ 31050491 (-)
G31278 NA non-coding upstream 442847 31102808 ~ 31103063 (-)
fam120b fam120b,LOC104944276 other downstream 122049 30515255 ~ 30532142 (-)
LOC120556497 csmd1,LOC102783723 other downstream 688444 29617320 ~ 29965747 (-)
elp4 elp4,LOC103373817 other downstream 1192955 29402035 ~ 29461236 (-)
prrg4 NA other downstream 1339482 29310550 ~ 29314709 (-)
LOC120555471 hipk3 other downstream 1385008 29217853 ~ 29269183 (-)
cdc42se2 cdc42se2,LOC103398548 other upstream 1448611 32108572 ~ 32117250 (-)
G31602 ddx28,LOC106597432 other upstream 2231538 32891499 ~ 32894405 (-)
wdr76 frmd5,LOC103354945,LOC103374291 other upstream 2682286 33342247 ~ 33353448 (-)
znf710b LOC104936257,LOC102799163,LOC101477128 other upstream 2776850 33436811 ~ 33471335 (-)
serf2 NA other upstream 2906410 33566371 ~ 33569379 (-)

Expression


Co-expression Network