LOC120556464


Basic Information

Item Value
gene id LOC120556464
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 9261211 ~ 9296717 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039796102.1
gtgtcttgttttagacttgttagtgaacacacacacatatctcagAAAGACTAATTTTGGAAATGGAACAAGGAAGACCGGTTCGTGGAGGGAGAAGGGTGGCAGGGAGAGGGCGGATACGTGGAGGAAGAcaaagaagacaaagagctgtTATTTCAGATGAAATAAGGTCTACACTTATAGACCATGTCCTGAACCATGGTCTCTCATTGAGAGAGGCAGGGTTGAGGGTGCAACCCAATCTGCAAAGATCCACAGTGGCATCTGTAATGCGAATTTTCCATCATACAAACAGACTGACTTTAGATCAGAAGATGAGTgatttggaggaagaggaggatggagcAGAGTCTGTAGTATCTGACTGTCTGTCAATGAAGAGTGATTTTTCCAAAGACGAACCTCCATTCTTCAGTAATgaacctggaccctcagacacaaaACTGACTTTAGATCAGAAGATGAGTgatttggaggaagaggaggatggagcAGAGTCTGTAGTATCTGACTGTCTGTCAATGAAGAGTGATTTTTCCAAAGACGAACCTCCATTCTTCAGTAATGAACCTGGACCCTCAGATACAAAAGAGCGGAAGATGAGTGATGTTTCTGTGGAGGAGCAGCGGTCTAGATCTAGAACAAGAGCTGAACTGCAGACAGCCGGTCAGACCAGCACTGTACAAATGAGATGTGGTCTGCAGAACCAGCATGAACATAAGATCTATCTGAAGAGGACATGTGAGCATGCAACGGAAGGAGCTCATAAAACATGTAGTGAAACTCCCCTCAACAGGATCTACAATGAGCTCTACATCACAGAGGGATGGAGTGAAGAGGTTAATACCCAGCATGAGGTGAGGCAGCTTGAGGCGGCTTCCAAGATCCTCCATGACACTCCAATCAAGTGCAGCGTTATCTTTAAAGCCTTATCTGGCCAACAGAAACACATCATAGTCGTTCTGACGATCGGCGTTGCTGGTGTTGGAAAAACCTTTTCCGTGCAGAAGTTCTCTCTGGACTGGGCCGAGGGTTTGGAAAACCAAGATATCAGTTTGGTGATTCCGCTTTCGTTCAGGGAGCTGAACTTGATCAAAGATGAGCAGTACAGTCTTCTGGAGCTGCTCCATGTTTTCCATCCAGCATTGCAGACGGCCACAGCAGAGCAGCTTGCTGGCTGGAAAGTtttgttcatctttgacggccTGGATGAAAGCAGACTTTCACTGGATTTCAACAACAATGAGGTTGTGTCTGATGTCACGCAGAACTCATCGGTCAACTTGCtgttgacaaacctcatcaaGGGGAAGCTGCTTCCCTCGGCTCTCGTCTGGATAACTtcccgacctgcagcagccaatcagatcgtTCCTGCATTTGTTGACAGGGTAACAGAAGTACGAGGCTTCACTGACGCCCAGAAGGGGGAGTACTTCAGGAGAAGAGTCAGTGATGAAGAGTTgtccagcagaatcatctcccacatcaagacatccaGGACCCTCCACATAATGTGTCagatcccagtcttctgctggatcactgctacagttcttgACCACATGTTGACTACAGACCagagaggagagctgcccaagaccctgactgacatGTACTCACACTTCTTGCTGGTTcagacaaagaggaagaagcaCAAGTATTCTGAGGGACATGAGATGAGTCCACAGGAGCTGTCAGAGTCTGACAGGGAAGTTCTTCTAAAGCTGGGGAGGCTGGCATTTGAACAGCTGGAGAAAGGAAACATCATTTTCTACCAGGAAGACCTGGAGCGCTGTGGTCTTGATGTCTCAGAGGCCTCGGTGTACTCAGGAGTTTGTACACAGATCTTCAAAAGAGAGAATGCGATCTTCCAGAAAACAGTCTACTGCTTCGttcatctgagtgttcaggagtttctggctgcagtCTACCTGTTCCACGGGTACACCAACAGGAACAAAAAGGTACTCAAGGACTTCCTGGGGAAAGACTGGAAATCAAAGAACAGTGACTTATCTATGGATGTTTTCTTGATGAAAGCCATGGATAAATCCCTGAAAAGTAAAAATGGCCACCTGGACCTCTTTGTCCGTTTCCTTTATGGCCTCTCTCTGGAGTCCAACCAGAGCCTCTTAGGAGGCCtgctgagacagacagacaacagtacAGAAATCATCCAGCGAGCCATCACCAACCTGAAGAAAAAGAGAACCAAAACCTCTCCTGACAGAAGCATCAACATCTTCCACTGTCTGATGGAGATGAACGACCACTCAGTCCATCAGGAGATCCAAGAGTTCCTCAAGTCAGAGAATAGATCAGAGAAGAAACTCTCTATGATCCACTGCTCAGCTCTGGCCTACATGATGCAGATGTCAGAGAAGGTTCTGGATGAGTTGGACCTGCTGAAGTACAACACAACAGCTGAGGGACGACtgagactgattccagctgtgaGGAACTGCAGAAAGGCTGTACTTTCTCATTCTCAACTTTCTGAGACTCACTATGAAGTTgtggcctcagctctgaagtctaacccctcccatctgagagagctggacctgagtaggaactacaacctgcaggattcagatATGAAGCTGCTGTGTGCTGGATTGGAGAGTCCACACTGTGGACTGGAGAATCTGAGATTGAGTCATTGCAGTTTGTCAGAAATCAGCTGTGCTCCCCTAgcctcagctctgaagtccaacccctcccatctgagcgAGCTGAAGCTGAATTACAACaagctgcaggattcaggagtgaagctgctgtgtggtttTCTGGAGAGTTCACACTGTAGACTGGCGACTCTCAGattgaGTCAGTGCagtttgtcagagatcagctgtgctgCCCTGGCATCAGCTCTGAATGCCAACCCCTCCTATCTGAGAGTGCTGGAGCTGAGTTACAACaagctgcaggattcaggagtgaagctgctgtgtggttttctggagagacaacactgtagactggagactctgagatTGAGTTACTGCAGTTTGTCAAAGATCAGCTGTGCTCTCCTGGCCTCGGCTCTGAAGgacaacccctcccatctgagggAGCTGGACCTGAGATACAACATCAAGCTGAAGGATTCAGACATGAAGTCAGTAGAGGGTTGGAGTTAGTCCATGCTGGTTTCAGCAGTATTGAACGATACACAGTTAGTATCAAAGCAAAGATCCAGTATTTCCTGTAAACCTCCAACCTTCTCAGTGAAGCTGTGAGAGGACAATggtgacacagagagaaaacagtCAGCCAATCAAATAAGCCAGACGCTTGTTGTGATCATGTGTTAGAGTTGATGTGAAGAAGActgttgatgttgtgttcaTGTCCACAGGAAAACAAGCTTGATTACAGCTGACACACACATGTCAAAACATGTACAGCAACAGCAAACTATCCAACCATCAAATCTGATCTCAAAGTATTTGTTCTCTCACTGCAACACTAAACAAATGATCAGGTCATCTTTGTCACAactatgagatcagtctgataTAGTGGTGTAACGGACCATTGTTGATCTCTTTGTAAAATGCAATCTGATTATTCCCAGGATTTAGAGAGTCCGCCGCTTCGTCATGACCCCGCAGTGCTGTTTCACATTTTCCACACAGTTTAATACATGTTATGATCCGACTGAGCACGTACCTGTTTGCCTCCACCTGTTTGTTATGTTGCTCAATGGAACACCTGTACGCACTGCCAATTTGGGCAGCGACATTTACCCTTATAAGTAAGCCCAACTTCATAGCATTATCCAGATGACTCCCGTTGTGATCTGTTTCAAATCTGTATAATCTGTCCTCGACCAACCCGTCCATCTCCCCCAAATAGGAGaaggaaaaaggaaaggaaacagaAGAGTGACTTCTTTTGTATGCGAACAGttagccactttttttttttcaaaccacTCCATATTAAACTTGcggttactttaaaaaaaataaaatcctaacATGAATGAAATGCAATTTAGGAAGATGTTATATTCATAGAAGATAATACATTATAAGAGATAATCTTCAAGAAATTACACAATTTGTTTGCTGTTCTTTCTGTTGACAGGGCTTTGCTCCACCTGCCCCTGATGACCAGTCGCCACTGATAAATACAAAAGTACCAAAGCGGCAGCAACTTGTCTGCAGGAGCGAGCATCAAGCCAAGAGGGCTAGCAAAGCAGGGTAGCATATCCTAACTTGTTAGCCTTCGCTAGCTTGGTAACTTCAAGCTACATACCTCTCAAGTCTCACGCATTGGGCGTGAGACACACGCATTTCAACCCGTTCACACGCTCACACGCcacaccttgtatttctcacgcagaTAAATTACCAGGATAACGCCCACCAGGTTGCGCTgctattttttaaacagtggaaCAGTTAGAGGAATCAAGTGAGTTCCCCCATAGAGTTCAGAAGGCCCTGCCACGCACCAGCTGAGTGAGTGCGGATTTCAAGTTGCGGATTTCGTCGACAAgtgtactcgccctgttgtttatctggttgctatgacttcgcgagtgatgacgtcctgtcactgttccagttgaggggagagagagaggatgacagatcgcttgagttcagtagagcacacgGCTCTGTAGAGTCATGGaattatgactttatatactacatgtacatagcggaaacccttttgtgcgtctgccctatttctgatactgtggcggcagaaatcaacatagaggaaacactgggtgGCTTTTGCGCCTATTATTATTaggcccgagcacgaaagtgcaaggccccaacggtgccttgcactgaaagtgcgaagaaac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039796102.1 True 4843 mRNA 0.46 9 9261211 9296717

Neighbor

gene id symbol gene type direction distance location
abhd17c abhd17c,LOC102793890,LOC100694079 coding upstream 169701 9056333 ~ 9091510 (+)
mesd mesdc2 coding upstream 510331 8745162 ~ 8750880 (+)
stard5 stard5 coding upstream 639499 8604276 ~ 8621712 (+)
LOC120556467 tmc3 coding upstream 659533 8545261 ~ 8601678 (+)
mex3b mex3b coding upstream 1114284 8140884 ~ 8146927 (+)
lins1 NA coding downstream 335290 9632007 ~ 9642958 (+)
lrrk1 lrrk1 coding downstream 564435 9861152 ~ 10096639 (+)
LOC120555943 LOC103372586 coding downstream 1128446 10425163 ~ 10465554 (+)
LOC120555947 hnrnpab,LOC100707314,LOC102779500,LOC101480042 coding downstream 1187746 10484463 ~ 10485311 (+)
LOC120555948 LOC103462314 coding downstream 1231121 10527838 ~ 10609081 (+)
G26276 NA non-coding upstream 16758 9240665 ~ 9244453 (+)
G26273 NA non-coding upstream 22646 9236352 ~ 9238565 (+)
G26218 NA non-coding upstream 440227 8820753 ~ 8820984 (+)
G26217 NA non-coding upstream 444595 8816407 ~ 8816616 (+)
G26216 NA non-coding upstream 448179 8812828 ~ 8813032 (+)
G26297 NA non-coding downstream 2771 9299488 ~ 9300207 (+)
G26335 NA non-coding downstream 164200 9460917 ~ 9473100 (+)
G26347 NA non-coding downstream 310026 9606743 ~ 9608997 (+)
G26367 NA non-coding downstream 425506 9722223 ~ 9722683 (+)
G26368 NA non-coding downstream 430475 9727192 ~ 9727740 (+)
G26236 NA other upstream 105868 9068729 ~ 9155343 (+)
G26205 NA other upstream 500910 8753701 ~ 8760301 (+)
LOC120556365 LOC102793592,LOC103366350,LOC101487888,LOC102307622,LOC100694289 other upstream 2255533 6993956 ~ 7005678 (+)
rwdd3 rwdd3 other upstream 2865505 6382570 ~ 6395706 (+)
LOC120555541 NA other upstream 2971435 6262410 ~ 6289776 (+)
cers3a cers3,LOC102798777 other downstream 36512 9333229 ~ 9378611 (+)
adamts17 adamts17 other downstream 94391 9391108 ~ 9604462 (+)
asb7 asb7,LOC102792420 other downstream 356861 9653578 ~ 9677027 (+)
aldh1a3 aldh1a3,LOC106562593,LOC103357544,LOC104941118 other downstream 517980 9814697 ~ 9860000 (+)
lto1 oraov1 other downstream 2606555 11903272 ~ 11912722 (+)

Expression


Co-expression Network