LOC120556474


Basic Information

Item Value
gene id LOC120556474
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 13089535 ~ 13091435 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039796119.1
ATGACGCAAACACAGCAACATTTCCAGAGCCATCTGGACGTTTTTGCACCCTCAATCTTATACATCGCGGTCATTACGAGGTCCACGGGGATCCAGATCAAAGTCAGCTTCCTGCAAGCAGAGCCCTACCCACTGCTGCTGTTCCTTTTGCCTTCATGCGCCGCCCCGCACCTGCCGCTTCTGCTTCCACCGAAACACCACGACCTTCCCCTGGAACTCCACGAGCTACTGGCCTGTTCCCTGCAAGATCCTTCCAAAGGTTACATGTCAATCCATGTTGCTGACATAGTGAATGACAAGCTCAGTACTTCCAGGACAGTTGTCATTCGCTTTTTGGAAGCTGATGCAACTGTTGAACGAATAACAGCAAAGGTGAAGGATGCATTAGGCTGTGATGAGCCAATTACCCTGACAGACAGCCAAGGAAATGAAATAGTGGACTCAGATGGCACAAGAAGTTCCCAATACTGGAAACAAAACTCCAGAAAAATCTACGCCACCTCTGAATATGACTTTGTAGAGTTCCAGAATGGAAGAAGAGCCAAAGCAAGTCGAAGGGCTGAAGACAGTTTGAGTGCACAAGAGGTCATTGGTAAAATCAACCAACCAAAGCAAGCTGCAGAGAGCCTCCAAGACATCACTACAACCATAAACCAGCTGTCTGAGCTTGCAAAGTCCAAAACCACAATAGTAATGCCAGATGCTTGTCTGCATTCTTTAAAGGAAGCCTTCACCTGTCTAATCTGTAAAGCTCTAATGGAAGAGCCCATGTTTTCCACATGCTGTGATTCTCTGGTTGGATGCCGAACATGTGTGGAGCAGTGGCTGTTAACTGCAGATCACTGTCTGAAATGCAGAGCTCAAGAGTTTGACTCCAAGGTGCACCAGGTTAAGGGTCTTTCTGCTTTCCTGTCTTCTTTCAAGGAGATACAAACAGAATAACTCATATAACATTGTTTCAGCAAGGATGGCATCTATGTTACTGGAAAGCTAAAGAGGCTGCAAAGTTTGCATTTTAGTAAACACCACAGCTGTTGATTTTATTAATCTGTTTTCTCAGAGGAAGATGAACTTGTTAATAAAATCATCTGTTGTGGTGTTATGTTGAAATGACAACCTGCAGCTTTCCAGGAACATGTCTAACCATCTCTggtttgcatttttcattatcaCATTGGTTCGATACGTGGTTATAATGTTTATTCCCGTTTGAtgttttataaaacattttggaATGGAGCAGTTGTTCCTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039796119.1 True 1252 mRNA 0.44 5 13089535 13091435

Neighbor

gene id symbol gene type direction distance location
LOC120556313 LOC104939823,LOC100707594,LOC101479997,LOC105924362 coding upstream 18203 13065952 ~ 13071332 (+)
LOC120555527 NA coding upstream 526982 12556047 ~ 12562553 (+)
LOC120556595 NA coding upstream 1057807 12031621 ~ 12031728 (+)
minar1 kiaa1024,LOC107562943,LOC102799073 coding upstream 1951137 10934633 ~ 11138398 (+)
LOC120555826 NA coding upstream 1958063 11129921 ~ 11131472 (+)
si:cabz01068815.1 NA coding downstream 53072 13144507 ~ 13176403 (+)
kbtbd13 NA coding downstream 113404 13204839 ~ 13208335 (+)
spg21 spg21,LOC102788283 coding downstream 160730 13252165 ~ 13271218 (+)
si:ch211-102l7.3 LOC102292170 coding downstream 586697 13678132 ~ 13696767 (+)
slc1a2a LOC104925837,LOC100698156,LOC102211357,LOC103366006,LOC104946114,LOC101471102 coding downstream 606211 13697646 ~ 13723065 (+)
G27064 NA non-coding upstream 64719 13024501 ~ 13024816 (+)
G27028 NA non-coding upstream 190348 12898975 ~ 12899187 (+)
G27023 NA non-coding upstream 218664 12870644 ~ 12870871 (+)
G27016 NA non-coding upstream 262901 12826392 ~ 12826634 (+)
G27012 NA non-coding upstream 286855 12802463 ~ 12802680 (+)
G27081 NA non-coding downstream 5396 13096831 ~ 13097130 (+)
G27085 NA non-coding downstream 17527 13108962 ~ 13109190 (+)
LOC120556095 NA non-coding downstream 109982 13201417 ~ 13202220 (+)
G27129 NA non-coding downstream 155265 13246700 ~ 13248009 (+)
G27161 NA non-coding downstream 287611 13379046 ~ 13381280 (+)
lto1 oraov1 other upstream 1176813 11903272 ~ 11912722 (+)
aldh1a3 aldh1a3,LOC106562593,LOC103357544,LOC104941118 other upstream 3229535 9814697 ~ 9860000 (+)
asb7 asb7,LOC102792420 other upstream 3412508 9653578 ~ 9677027 (+)
adamts17 adamts17 other upstream 3485073 9391108 ~ 9604462 (+)
cers3a cers3,LOC102798777 other upstream 3710924 9333229 ~ 9378611 (+)
G27086 NA other downstream 18322 13109757 ~ 13110339 (+)
LOC120556202 NA other downstream 143800 13235235 ~ 13237819 (+)
slc35c1 slc35c1 other downstream 580042 13671477 ~ 13676613 (+)
lrrc4cb LOC104946080,LOC107396660,LOC103367510,LOC108234802,LOC101071141 other downstream 718500 13809935 ~ 13856423 (+)
bbox1 bbox1,LOC102798250 other downstream 1617127 14708562 ~ 14735176 (+)

Expression


Co-expression Network