LOC120556479


Basic Information

Item Value
gene id LOC120556479
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 20253713 ~ 20279186 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039796124.1
GCGGGAGACCACTCATGGAAAAGCTGAAGCGATTGAATATGGAGGACTTTGTTAAACTAAAGTTAACAGAACGGCAACTTCTGGAGCTGATTGACACTTTTGCAGATTGCGCAGGACTTCGAGGTCCTTCATAAAGAGGCATCAGACTAAATGTTTGACCTGGAGGAGGTTCAGCGAGAAGCTTGTTCATGCGGCCCAGCGGGGGGGAGCTCCAGGTGCAGACCGAGTCTTTGTCTCAAGgCTCCAAAGACTACATTGCCCTGATGGTTCTGCCAGGTCTGATTCCACCTGCAGTCTTCAGGATGGGCCGAAAGACCGTGAGGACTACAGTGTCTGACGCCATGAAGGCCTTCATCGATCTTAAGCCTGTCGGATGGTGGATACCTTCAGGCAGCAGACCAGACCATACCCCTACACCCTGGTGTTGGGAGGAGAGGACTGCTGCTCACAGCCATTCACCGTTCTCAGTGGGCCGGCCCTGGAGCACGACAGCGTTGTCCAAGCTGTACATGTTTGTTTCAAATGTTTACTTGTGTTTGATATCAATTTCCCAAAGCAGTGTTTCTCTGCTTGGCTGTTCCTCAAGAAAGGGCTGTCTATGGAATGGGGGAAGGGgctgtgagagtCCTCTCCGCTCAATCCTGGTACTGGTTCtgccgggcttcccttccctccagcagGCCCAGCAGTACGTCCTGGGCCTCCAGCTTcttggtgtcgtcctggactacgtagAAGATCCTCCCGATCAGCagggaccggcgcagcagcgaggcaAAGCTGCCGGCGGCAGCGTCTTTTCCCCCGGGAAGGAACACAGCTTTGCCTTGCTGCTGCGCCTGCTGATCCAGATGGGACCGGCCAAAGACAGTGGTGATCGGGAGGATCACCACTTAGTGTTTAGTGTTTGCCCCCCaGTATTAACAACTTCTGTCATCGTTTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039796124.1 True 944 mRNA 0.54 8 20253713 20279186

Neighbor

gene id symbol gene type direction distance location
gpalpp1 gpalpp1 coding downstream 742000 19508685 ~ 19511713 (-)
gtf2f2a gtf2f2 coding downstream 745181 19500529 ~ 19508532 (-)
LOC120555523 LOC103359460,LOC102291763,LOC102215599,LOC101468151 coding downstream 758300 19459171 ~ 19495413 (-)
marchf7 LOC104963329 coding downstream 895346 19343424 ~ 19358367 (-)
psmd14 psmd14,psde,LOC107563735 coding downstream 1020873 19227639 ~ 19232840 (-)
tdrd3 tdrd3 coding upstream 196441 20475627 ~ 20497725 (-)
pcdh17 LOC104926281,LOC104949434 coding upstream 641758 20920944 ~ 20990225 (-)
LOC120556394 LOC104958904,LOC103352838,LOC105933796,LOC103378628,LOC107088303,LOC107687747 coding upstream 1073345 21352531 ~ 21362696 (-)
txnl4b txnl4b coding upstream 1089726 21368912 ~ 21371958 (-)
blzf1 blzf1 coding upstream 1095028 21374214 ~ 21380699 (-)
G28697 NA non-coding downstream 139351 20114023 ~ 20114362 (-)
G28678 NA non-coding downstream 189003 20064370 ~ 20064710 (-)
G28677 NA non-coding downstream 190068 20062533 ~ 20063645 (-)
G28674 pcdh9 non-coding downstream 259759 19991932 ~ 19993954 (-)
G28670 NA non-coding downstream 329715 19923735 ~ 19923998 (-)
G28722 LOC103376870 non-coding upstream 76861 20356047 ~ 20356344 (-)
G28726 NA non-coding upstream 145233 20424419 ~ 20424739 (-)
G28747 NA non-coding upstream 200689 20479875 ~ 20480490 (-)
G28748 NA non-coding upstream 204255 20483441 ~ 20484014 (-)
G28774 NA non-coding upstream 485525 20764711 ~ 20764937 (-)
LOC120555836 pcnp other downstream 1127302 19123541 ~ 19126411 (-)
LOC120555695 NA other downstream 1183717 19054091 ~ 19069996 (-)
G28345 NA other downstream 1533694 18719372 ~ 18720019 (-)
LOC120556268 btbd1 other downstream 1595054 18650029 ~ 18658659 (-)
G28269 mapk6 other downstream 1833214 18416069 ~ 18420499 (-)
LOC120555658 NA other upstream 1300782 21579968 ~ 21583558 (-)
G28933 NA other upstream 1301856 21581042 ~ 21583498 (-)
gpc6a LOC101477426,LOC100710496,LOC102798074,LOC103365236,LOC102217784 other upstream 1607402 21886588 ~ 22051625 (-)
LOC120555944 LOC103365297,LOC100709700,LOC102795695,LOC102312860 other upstream 1991684 22270870 ~ 22336817 (-)
cbfa2t3 cbfa2t3,LOC102789151 other upstream 2269514 22548700 ~ 22601557 (-)

Expression


Co-expression Network