LOC120556512 (glg1,LOC100701703,LOC101472041,LOC108242135)


Basic Information

Item Value
gene id LOC120556512
gene name glg1,LOC100701703,LOC101472041,LOC108242135
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 40386097 ~ 40416063 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039796156.1
CTTTATGACTAGCTTGACAGTGGTGTGAAGATGGCGGCGTACAGATACCCTcagctgctgccgctgctgttATCATGCGTGTGTCTCTGCGGTTTCGGCTCCGTCCTCGGCTTGAAGGCTGTCAGCGGCCCGGCCGAGTTGCCCAACCCGCCTAACCCGCCCAACCCGCCCGTCCTCAGAGCGGTTAATCCCCCGGCCAAGGATGCACCTGCCGCCGCTGCCGCCGCCGCTGGGGCCTCTCAGCCTCGAAGGGCGACCAGTTGGAAGCTGTCGGAGGAGGCGGCCTGCCGAGAGGACCTGTCCCGCCTCTGCCCCAAACACACCTGGTCCAACAACCTGGCCGTGCTGGAGTGCCTGCAGGACCGCAGAGAGGAATCTGAGATTTCTCCTGACTGTAACCATcttctGTGGAACTATAAACTCAATCTGACCACAGATCCAAAGTTTGAGTCAGTGGCCATGGAGGTCTGCAAGAGCACCATCAGTGAGATAAAGGAGTGTAACGAGGAGGAGCGAGGGAGGGGCTACCTGGTGTCCTGTCTGGTGGATCACCGTGCCAACGTCAGCGAGTACCAGTGCAACCAGTACATCACCAAGATGACTAGTATAGTCTTCAGTGACTACAGACTGATCTGCGGCTTCACGGACAAATGTAAAGAAGACATCAACAGCCTGCGCTGCGGCAGCATCAACGTGGGACAAAAGGACGTCCACTCTCAGGGCGAGGTCATCTCCTGTCTGGAGAAGGCGCTGGTTCGGGAGGCGGAGCAGCAGGATCACGTTCATCCAATCAAAGAGGAGTGCAAGAGGGCCATCTTGCGGGTAGCGGAGCTGTCGTCGGACGACTTTCACCTCGACCGACATCTTTACTTCTCCTGCAGAGCTGACCGCGAGAGATTCTGTCGGAACACTCCGGCAGGGGAAGGGAAAGTCTACAAGTGTCTGTTCAATCACAAGTTTGAGGAGGCCATGTCAGAGAAGTGCCGTGACGCTCTGACCACCCGCCAGAAGCTGATCTCTCAGGACTACAAAGTCAGTTACACTCTGGTTAAAGCCTGTAAGGTGGAACTGAAGAAGCACCGCTGCAACCTGGACGCCAGCCTGCCGCGAGCGCGTGAGGCCCGGCTGTCCTACCTGCTGCTGTGTCTGGAGGCTGCCGTGCACCGCGGTCGTCCGGTCACCGGCGAGTGCCAGGGGGAGATGCTGGACTACCGGCGGATGCTGATGGAGGATTTCTCCCTGAGTCCGGAGATCGTGCTGCACTGCCGCACGGAGATCGAGGCCCACTGCTCCGGCTTGCACCGCAAAGGCCGCACGCTGCACTGCCTGATGAAAATCGGACGCGGCGACCGCAGCACCGCGGTCGACGGCCTCTGCCAGAGCGCTCTGCAGACTTTGATCCAGTCTACCGACCCCGTAGCCGACTACAGGATCGACCGAGCGCTCAACGAGGCCTGCGAGTCCGTCATCCAGACCGCCTGCAAACACATCCGCACCGGAGACCCAATgatCCTGTCATGCCTGATGGAGCACCTGTACACAGAGAAGATGGTGGAGGACTGTGAGCACCGGCTGTTGGAGCTGCAGTATTTCATATCCAGAGACTGGAAACTGGACCCCACCCTGTATAAGAAGTGTCAGGGTGACGCTGCTCGCCTCTGCCACACACACGGCTGGAACGAGACCAGCGAGCTGATGCCGCCGGGCGCCGTCTTCTCCTGCCTGTACCGCCACGCCTACCGCTCCGAGGAGCAGGGACGCCGGGTAAATTCAACCGAGCAGttatCTCGGGACTGTAAGATGGAGGTTCAGAGGATTCTCCGCCAGAGGGCGCTGGATGTGAAGTTGGACCCTGATCTGCAGAGACGCTGCATGACCGACCTCGGCAAGTGGTGCAGCGAGAAGACAGACACTGGACAGgagctGGAGTGTCTTCAGGATCATTTGGAGGACCTGGTGTCGGCCTGCAGGGAGGTCGTGGGCAACCTGACCGAGCTGGAGTCAGAGGACATCCAGATTGACGCTCTGCTCATCAAAGCCTGTGAGCCCGTCGCTCAGGCCTACTGCCATgatGTAGCTGCTAACCAGATCGATACAGGTGATCTGATGGAGTGTTTGGTTCAGAACAAACACCAGAAGGAGATGAACGACAAGTGTACAGTCGGTGTTACACACTTCCAGCTGGTTCAAATGAAGGATTTCCGGTTCTCCTATAAGTTCAAGATGGCCTGTAAGGAGGACGTTCTCCGCTTGTGTCCAAACATCAAGAAAAAGGTGGACGTCGTCCTCTGTCTCAGCTCCACGGTGAAGAACGACACGCTGCAGGAGGCCAGGGAGCAGCGGGTTTCACTCAAATGTCGTAAACAGCTGCGTGTGGAGGAGCTGGAGATgtCGGAGGACATCCGGTTGGAGCCGGAGTTGTACGATCCCTGCAAGTCCGACATCAGTCGCCTGTGTCCCAACGTGGCCTTCGGTAACGCTCAGaTGATCGAGTGTCTGAAGGAGCAGAAGAAGCAGCTGAGTCCTCGCTGCCACCAGCGGATCTTCAGGCTGCAGGAAGTGGAGATGACCGACCCCGAGCTCGACTACCAGCTGATGAGAGTCTGCAAGCAGATGATCAAGCGGTTCTGTACCGAAGCGGATGCCAGAAACGTCCTCCAGTGTCTGAAACAGAACAAGAACAGCGAGCTGATGGATCCCAAGTGTAAACAGATGATCACCAAGAGACAGATCACGCAGAACACGGaCTACAGGTTGAACCCGCTGTTGAGAAAAGCTTGTCGAGCCGACATCCCAAAGTTCTGCCAGCCCATCCTGAACAAGGCCAGCGACGACAGCGAGCTGGAGGGCCAGGTCATCGCCTGCCTCAAACTCAAATACGCCGACCAGAAGTTGTCTTCAGACTCACGAAGACCAcctctctccgtgtcctcctctcctctcctcccccctcaGATCTCCAGGTTGTGTGCGGAGGAGGCAGCAGCTCAGGAGCAGACCGGTCAGGTGGAAGAGTGTCTGAAAGTCAACTTGCTGAAAATCAAACTGGAAGCTTGTAAAAGGGAAGTCCTGAACATGCTGAAGGAGAGCAAGGCGGACATATTTGTGGACCCGGTCCTCCACACAGCCTGCGCTCTGGACCTCAAACACCACTGTGCTGCCATCACGCCCGGCAGAGGACGACAGATGTCGTGTCTGATTGAGGCGTTACAGGACAAGAGAGTTCGTCTGCAGCCCGAGTGTAAGAAAAGACTTCAAGACCGCATCGACATGTGGAGCTACGCTGCCAAGGTGGCGCCGGCAGAGGGCTTCTCAGACCTGGCGGCGCAGGTGATGACCTCGCCTTCCAAGGACTACATCCTGCTCATGATCGCGCTGAGCGTGTGCGTCCTCTTCCTGGTGGGTCTGCTGTGTGGGCGGATCACCAAGCGAGTGACGAGGGAACTGAAGGACCGGTAGAGGACCAGAGCGCTCTAACAAAAGACTGACTCCTCgcaccttcctcctcttcctcttcttcctcctcttcgtctCTCAGATGCACAGTGCCCACAATTGGAACTCCTCTGTTTATTGGCTGCTGCTGAATATTTGCATCAAAATGCAAAATGGTCCCCCCGACTCTCACGAAAAGCTTAAATTCCCTCCATTTGGGCATCTCCAAACTGATCGTCTGATTGGAGCGATTTTTGCCTTGATCGTACCATGCT

Function

symbol description
glg1 Predicted to enable fibroblast growth factor binding activity. Predicted to act upstream of or within several processes, including negative regulation of protein processing; negative regulation of transforming growth factor beta receptor signaling pathway; and regulation of chondrocyte differentiation. Located in Golgi apparatus.

NR:

description
PREDICTED: Golgi apparatus protein 1 isoform X1

GO:

id name namespace
GO:0000139 Golgi membrane cellular_component

KEGG:

id description
K06816 GLG1, ESL1; golgi apparatus protein 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039796156.1 True 3710 mRNA 0.57 27 40386097 40416063

Neighbor

gene id symbol gene type direction distance location
samd4a samd4a,LOC102311861 coding downstream 72292 40244929 ~ 40313805 (-)
slc22a18 slc22a18 coding downstream 447231 39931306 ~ 39938866 (-)
LOC120556430 LOC101156874,LOC103142636,LOC107083861 coding downstream 475646 39902668 ~ 39910451 (-)
LOC120555276 LOC100703294,LOC107381837,LOC103366994,LOC102295725,LOC102215676,LOC101474681 coding downstream 487580 39882936 ~ 39898517 (-)
mpped2a mpped2,LOC106524710,LOC102220360,LOC107083882,LOC100703837,LOC102192152,LOC107381839 coding downstream 592185 39721272 ~ 39793912 (-)
LOC120556376 NA coding upstream 182706 40598769 ~ 40631125 (-)
LOC120556133 NA coding upstream 232284 40648347 ~ 40652751 (-)
foxr1 NA coding upstream 250209 40666272 ~ 40671602 (-)
LOC120556279 atp6v0d1,LOC103462946,LOC107563463 coding upstream 256852 40672915 ~ 40682357 (-)
ndufs3 ndufs3 coding upstream 513407 40929470 ~ 40934556 (-)
G33068 NA non-coding downstream 51150 40331750 ~ 40334947 (-)
G33048 NA non-coding downstream 177322 40207391 ~ 40208775 (-)
G32952 NA non-coding downstream 336731 40048059 ~ 40049366 (-)
G32943 NA non-coding downstream 347637 40026134 ~ 40038460 (-)
LOC120556076 NA non-coding downstream 400318 39974853 ~ 39985779 (-)
G33109 NA non-coding upstream 146129 40562192 ~ 40563931 (-)
G33167 c1qtnf4,LOC102794664 non-coding upstream 502164 40918227 ~ 40918584 (-)
G33168 NA non-coding upstream 504271 40920334 ~ 40925054 (-)
G33196 NA non-coding upstream 520778 40936841 ~ 40937064 (-)
G33347 NA non-coding upstream 1029466 41445529 ~ 41445742 (-)
LOC120556511 LOC102208128,LOC101468289 other downstream 244049 40049624 ~ 40142048 (-)
slc6a5 slc6a5 other downstream 1150351 39205275 ~ 39235746 (-)
LOC120556344 lrrc49,LOC102795887 other downstream 2558826 37788725 ~ 37827271 (-)
ss18l2 ss18l2 other downstream 3132671 37231141 ~ 37253426 (-)
nod2 nod2 other downstream 3494793 36883651 ~ 36891304 (-)
LOC120556146 NA other upstream 148178 40564241 ~ 40589664 (-)
G33122 NA other upstream 232613 40648676 ~ 40662621 (-)
LOC120556513 NA other upstream 245301 40661364 ~ 40663657 (-)
sirt3 sirt3 other upstream 1341564 41757627 ~ 41764896 (-)
G33711 NA other upstream 1983228 42399291 ~ 42402136 (-)

Expression


Co-expression Network