gpalpp1 (gpalpp1)


Basic Information

Item Value
gene id gpalpp1
gene name gpalpp1
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 19508685 ~ 19511713 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039796201.1
GAAGCCTCATTGTGTTTACTTCCTGGGTGAAAGGTGAAATTCGTCGTTCGAGGTTCCTCCAGCGAatctttgttttgtcttgtttatggagaagcttttagtttttagttttttactttGATAGAAATTGCTAAAACTACGTGACTCAgtaagtagctagctagctaagccaTCCGTTTAAAATATGTCGTCAATCAGACCTGCTTTACCCCCGATGTGTGTAAAGGAGGAGAGGGATGAAGACTCTGATAGTGATGAAGGATTCTCTGGCCCTGCTTTGCCTCCTGGCTATAAAGTGGGAGAACCGTCGAGCTCCTCGGATGACAGCGAACAGGAGGTGGCGGCCAAAAGAGCAAAAACAAGACACACAGCTGCAGAAAGATCAGCAGACAAGGTGGACAACAAAAAGGCACAAGAAAAAGCTGATGATGGTTTCTTTGGACCAGCCCTACCACCAGGATTCAGGAAACAACAGAGTTCACCAGAGAGACCGCCTGTGCTGGGACCAGCTTTGCCTCCTGGGTTTCGAAGAGCAGCATATGAAAACGATGATGACAATGATGGGGAAGATGGGGAGGATTTCCCGGGGCCTGCCCTTCCTCCTGGCTACCAGGCTGAGTCCTCCAGCAGCGAGGGAGGGGATGATGATGTGATTGGACCCATGCCGCCCAAAGGGCCTATTGAAGACTCCGTGGCTCTGGACTTTGAGCGCAGAGCACGGAGGATGAAAGAGAAGTTGATAGGAGATGACACTCCTGAGGTGCTGGCTAGAGAAACCTGGATGACAGAGCTCCCACCAGAACTGCAGCACATTGGCTTGGGGGCTCGAACCTTCAAGAAGAAGTCAGGTCCAGAGAACAAGGATCGCTCCATTTGGACAGATACACCAGCAGATATTGAGCGCAAGACCAGGGAACATCTTGAGCGAAAGAAGAAGGGTGAGGTGGAGATAGACGATGTCCCACAAGTCTCCAAGAGGGACGTGGAAATGGCAGATAAAGTCTCTAAGTATAACGAGTCTAAACGTGCTGAGTCTCTGGTGAGTATGCACACAAAGAAGATGAAGGAAAAAGCAAAGGAGAAGGCTGACAAACCAGTGGAGAGGAGACCGTTCGATCGAGATGAAGACCTGCAGGTGAATCGCTTTGATGAGGCGCAGAAGCAGCGGCTGCTGAAGAAATCTCAGGAACTGAACACACGATTCTCCCACAGCAGGGACCGAATGTTCCTGTAACAAATTGTCAAAATATTAGAAAGATGTTTGAACGGGCAGACCTTCAGTTACAGTCTGGCTGGTGAAATTTTCATACAGGTTTTGTAAAATATGGACTATGTTTGTACAGATACTCATGTCACAAATGGAGAATTAAATTGGACTAACCTGGACTAAACAGACTATATAGACGTGGCAGACGGGTCCATTTCAGCGAGTGTATGTCAGTGACTGGGTGCAATGGTACAGTATATGTTTTCAAACTGATTCAAGTTGTTATAAAGCAGCAGCCAGTGGAGCTTGCATTTTTTTCAGGAGACACTGAATTAGGGCTGATGATATGGAAGGAATTACTCAAATAAATTACATATTTTCCTACATTGATATGGTTGATTTTGTGAAACACCTTTTGTACAGATTGCTGTAAAATGCATTGTTATGTCGCATGCACTCCCTGTAGCTTTGCAATCTAATCAATATGTCCAATAAACTgcttttgcaaaaaa

Function

symbol description
gpalpp1 Orthologous to human GPALPP1 (GPALPP motifs containing 1).

NR:

description
PREDICTED: GPALPP motifs-containing protein 1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039796201.1 True 1719 mRNA 0.46 7 19508685 19511713

Neighbor

gene id symbol gene type direction distance location
gtf2f2a gtf2f2 coding downstream 153 19500529 ~ 19508532 (-)
LOC120555523 LOC103359460,LOC102291763,LOC102215599,LOC101468151 coding downstream 13272 19459171 ~ 19495413 (-)
marchf7 LOC104963329 coding downstream 150318 19343424 ~ 19358367 (-)
psmd14 psmd14,psde,LOC107563735 coding downstream 275845 19227639 ~ 19232840 (-)
fn1b fn1,LOC103359471 coding downstream 301042 19182528 ~ 19207643 (-)
LOC120556479 NA coding upstream 742000 20253713 ~ 20279186 (-)
tdrd3 tdrd3 coding upstream 963914 20475627 ~ 20497725 (-)
pcdh17 LOC104926281,LOC104949434 coding upstream 1409231 20920944 ~ 20990225 (-)
LOC120556394 LOC104958904,LOC103352838,LOC105933796,LOC103378628,LOC107088303,LOC107687747 coding upstream 1840818 21352531 ~ 21362696 (-)
txnl4b txnl4b coding upstream 1857199 21368912 ~ 21371958 (-)
G28558 baz2b non-coding downstream 72972 19420548 ~ 19435713 (-)
G28557 NA non-coding downstream 90250 19417412 ~ 19418435 (-)
G28552 NA non-coding downstream 99183 19351997 ~ 19409502 (-)
G28545 NA non-coding downstream 177170 19330490 ~ 19331515 (-)
G28516 NA non-coding downstream 214375 19292974 ~ 19294310 (-)
G28623 LOC103359454,LOC100700192 non-coding upstream 17859 19529572 ~ 19531634 (-)
G28632 LOC102784954 non-coding upstream 38414 19550127 ~ 19551890 (-)
G28637 NA non-coding upstream 45965 19557678 ~ 19559314 (-)
LOC120556360 NA non-coding upstream 62606 19574319 ~ 19600624 (-)
G28670 NA non-coding upstream 412022 19923735 ~ 19923998 (-)
LOC120555836 pcnp other downstream 382274 19123541 ~ 19126411 (-)
LOC120555695 NA other downstream 438689 19054091 ~ 19069996 (-)
G28345 NA other downstream 788666 18719372 ~ 18720019 (-)
LOC120556268 btbd1 other downstream 850026 18650029 ~ 18658659 (-)
G28269 mapk6 other downstream 1088186 18416069 ~ 18420499 (-)
LOC120555658 NA other upstream 2068255 21579968 ~ 21583558 (-)
G28933 NA other upstream 2069329 21581042 ~ 21583498 (-)
gpc6a LOC101477426,LOC100710496,LOC102798074,LOC103365236,LOC102217784 other upstream 2374875 21886588 ~ 22051625 (-)
LOC120555944 LOC103365297,LOC100709700,LOC102795695,LOC102312860 other upstream 2759157 22270870 ~ 22336817 (-)
cbfa2t3 cbfa2t3,LOC102789151 other upstream 3036987 22548700 ~ 22601557 (-)

Expression


Co-expression Network