LOC120555566


Basic Information

Item Value
gene id LOC120555566
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 11183133 ~ 11183824 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005638732.1
CCATGCATCAACTGCAACAGCTATGGTCCGGACTCTGCTGCTAGGGGTGTTTCCAGTGGATGTCCTCCTTCAAAGTAACCTCAAAGGTTGAAAATCCAGAAGGGATGAGACTGATCTGCAGCGGGAAGCAGTTGACTCCAACACCATCTATGTTATTTTTGACGCAGTGTTGAAGAAATTTCCACAGGCCACCAAGGGACAACTGGGGACAGCTGTCAACTCAAAAATAGCTGAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005638732.1 True 235 lncRNA 0.48 3 11183133 11183824

Neighbor

gene id symbol gene type direction distance location
tssc4 NA coding downstream 393363 10766173 ~ 10789770 (-)
LOC120555515 NA coding downstream 432967 10745861 ~ 10750166 (-)
ano9b ano9,LOC103369658,LOC100691858,LOC102197938 coding downstream 451232 10640938 ~ 10731901 (-)
snrpa1 snrpa1 coding downstream 890209 10259231 ~ 10292924 (-)
zgc:113274 NA coding downstream 937747 10244124 ~ 10245386 (-)
LOC120555500 LOC107373152,LOC106943100,LOC106904307 coding upstream 23716 11207540 ~ 11220942 (-)
LOC120556010 tollip coding upstream 61928 11245752 ~ 11291530 (-)
LOC120555675 NA coding upstream 199676 11383500 ~ 11384371 (-)
celf1 celf1,LOC106561939,LOC106531342,LOC106587097 coding upstream 203853 11387677 ~ 11463360 (-)
c3h16orf87 LOC104939617,LOC103369653,LOC101078579,LOC101483362,LOC100690510 coding upstream 390209 11574033 ~ 11599622 (-)
LOC120556158 NA non-coding downstream 15829 11165880 ~ 11167304 (-)
G26693 NA non-coding downstream 43808 11138734 ~ 11139325 (-)
G26675 NA non-coding downstream 176538 11006173 ~ 11006595 (-)
LOC120555827 NA non-coding downstream 226526 10955736 ~ 10956607 (-)
G26635 NA non-coding downstream 303820 10878981 ~ 10879313 (-)
G26737 NA non-coding upstream 41394 11225218 ~ 11226412 (-)
G26750 NA non-coding upstream 161804 11345628 ~ 11345871 (-)
G26785 NA non-coding upstream 286956 11470780 ~ 11471227 (-)
G26802 NA non-coding upstream 375744 11559568 ~ 11559895 (-)
G26804 NA non-coding upstream 380398 11564222 ~ 11564551 (-)
G26298 NA other downstream 1886387 9295068 ~ 9296746 (-)
LOC120555589 cemip other downstream 2203989 8759601 ~ 8979144 (-)
tlnrd1 mesdc1 other downstream 2424325 8733419 ~ 8758808 (-)
il16 LOC102796330 other downstream 2485511 8630608 ~ 8697622 (-)
LOC120555934 NA other downstream 2686498 8494353 ~ 8496635 (-)
mtfmt mtfmt,LOC102776665,LOC102776373 other upstream 292682 11476506 ~ 11510300 (-)
LOC120555651 NA other upstream 459407 11643231 ~ 11669269 (-)
G26891 NA other upstream 776877 11960701 ~ 11961772 (-)
G26924 LOC108281047 other upstream 1120715 12304539 ~ 12304824 (-)
G27075 LOC104939823,LOC100707594 other upstream 1886172 13069996 ~ 13095766 (-)

Expression


Co-expression Network