LOC120555634


Basic Information

Item Value
gene id LOC120555634
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 2640084 ~ 2640928 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005638739.1
CGGACCCATGCCCCCGTGCGTTGGATCTGCTGACCATCAGATTTTTCCAAACCCTGCGCCGAAAAAGGAACATCGGTACAACTGGGAGCTGGAAGTTACAGGATCCCCATGGAAAGGCAGCCCCTGGTGGTCTCAGCAGTAGCTACCTTACCGGAAAAGGCCAAGAACAAAAAAGGTGTCTGAGATGCCTTCCCCTGGTTGAGAGAGACACCGGTTTAATATCTGAATGACTCACCTGCGTGGAGCAGgcagcatcatggga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005638739.1 True 262 lncRNA 0.53 3 2640084 2640928

Neighbor

gene id symbol gene type direction distance location
phkb phkb coding upstream 457330 2039463 ~ 2182754 (+)
slc7a10a LOC104919817,LOC103369274 coding upstream 822090 1789953 ~ 1817994 (+)
zgc:165481 LOC103369239,LOC108241605,LOC103379234 coding upstream 941725 1674741 ~ 1698359 (+)
LOC120556440 LOC104962514,LOC103369193,LOC107381980,LOC106931206 coding upstream 1255009 1378010 ~ 1385075 (+)
LOC120556244 LOC103369184,LOC102786692,LOC100700148,LOC101476567,LOC102297530 coding upstream 1275358 1312448 ~ 1364726 (+)
LOC120555875 LOC103368003,LOC100711702 coding downstream 582941 3223869 ~ 3236019 (+)
adgrg1 NA coding downstream 609680 3250608 ~ 3273178 (+)
slc7a6 slc7a6,LOC104919890,LOC103355407,LOC102782072 coding downstream 639148 3280076 ~ 3305488 (+)
LOC120555909 NA coding downstream 780275 3421203 ~ 3422406 (+)
mtss1lb LOC102779958,LOC108237900,LOC103462242,LOC103355402 coding downstream 982706 3623634 ~ 3724143 (+)
G25249 NA non-coding upstream 28547 2588681 ~ 2611537 (+)
G25248 NA non-coding upstream 51932 2587872 ~ 2588152 (+)
G25237 NA non-coding upstream 323949 2314809 ~ 2316135 (+)
G25220 NA non-coding upstream 424536 2215247 ~ 2215548 (+)
G25203 NA non-coding upstream 456314 2182806 ~ 2183770 (+)
G25262 NA non-coding downstream 76142 2717070 ~ 2717460 (+)
G25279 NA non-coding downstream 328842 2969770 ~ 2970258 (+)
G25281 NA non-coding downstream 330679 2971607 ~ 2971910 (+)
G25288 NA non-coding downstream 498761 3139689 ~ 3140387 (+)
LOC120555484 slc7a6os,LOC102781591 non-coding downstream 668447 3309375 ~ 3379915 (+)
adamts18 adamts18 other upstream 327927 2240414 ~ 2312157 (+)
G25204 NA other upstream 556765 2081958 ~ 2083319 (+)
G25173 dnaja2,LOC106524269 other upstream 797273 1839333 ~ 1842811 (+)
mapk8ip1b mapk8ip1,LOC102793463 other upstream 2555658 11843 ~ 84426 (+)
mmp15b mmp15,LOC104948393 other downstream 840369 3481297 ~ 3518086 (+)
G25431 NA other downstream 1144005 3784933 ~ 3785542 (+)
G25512 NA other downstream 1929445 4570373 ~ 4575645 (+)
tshz3b tshz3 other downstream 2152887 4793815 ~ 4837285 (+)
G25708 NA other downstream 3393281 6034209 ~ 6035193 (+)

Expression


Co-expression Network