LOC120556117


Basic Information

Item Value
gene id LOC120556117
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 14999704 ~ 15000287 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005638806.1
AAACCTGTACAGGAGGAACCTGAGGAACTCTCCGATAGTGACTTTGAAAGTCCTGTGGGCTGGAGAAGGAGAGTTCATACAGTGTCACCTTCCACAAGTGAAAGTGAGCTCATCAGTCAAGGGAGTGAAAATGACAGACTGCAAGAAAGTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005638806.1 True 151 lncRNA 0.47 3 14999704 15000287

Neighbor

gene id symbol gene type direction distance location
LOC120555721 arl14ep,LOC102778030,LOC103375558 coding upstream 134915 14852285 ~ 14864789 (+)
fibinb fibin,LOC103373419,LOC106523552 coding upstream 293470 14702979 ~ 14706234 (+)
luzp2 luzp2 coding upstream 536411 14283159 ~ 14463293 (+)
cdkn1ca NA coding upstream 905383 14092864 ~ 14094321 (+)
traf6 LOC103361723 coding upstream 944210 14048291 ~ 14055494 (+)
ddb1 ddb1 coding downstream 79507 15079794 ~ 15154115 (+)
taldo1 taldo1,LOC102780893 coding downstream 361912 15362199 ~ 15374072 (+)
LOC120556051 NA coding downstream 373901 15374188 ~ 15392333 (+)
LOC120555952 LOC103368873 coding downstream 393497 15393784 ~ 15418775 (+)
cpeb1b cpeb1 coding downstream 490112 15490399 ~ 15504450 (+)
G27432 NA non-coding upstream 41837 14957500 ~ 14957867 (+)
G27358 NA non-coding upstream 268058 14730817 ~ 14731646 (+)
G27356 NA non-coding upstream 315588 14683833 ~ 14684116 (+)
LOC120556358 NA non-coding upstream 422001 14574197 ~ 14577703 (+)
G27320 NA non-coding upstream 533024 14466478 ~ 14466680 (+)
G27449 NA non-coding downstream 16297 15016584 ~ 15017505 (+)
G27459 NA non-coding downstream 61932 15062219 ~ 15065509 (+)
G27565 rps17,LOC101480409,LOC100699764,LOC107389132 non-coding downstream 523687 15523974 ~ 15531915 (+)
G27566 NA non-coding downstream 533716 15534003 ~ 15535415 (+)
G27567 NA non-coding downstream 545204 15545491 ~ 15545779 (+)
kcna4 kcna4 other upstream 34642 14889390 ~ 14965062 (+)
bbox1 bbox1,LOC102798250 other upstream 264528 14708562 ~ 14735176 (+)
lrrc4cb LOC104946080,LOC107396660,LOC103367510,LOC108234802,LOC101071141 other upstream 1143281 13809935 ~ 13856423 (+)
slc35c1 slc35c1 other upstream 1323091 13671477 ~ 13676613 (+)
LOC120556202 NA other upstream 1761885 13235235 ~ 13237819 (+)
LOC120556271 tmem138,LOC104922799,LOC102296598,LOC102204478,LOC104956289,LOC103368539,LOC102790175,LOC102222702 other downstream 47590 15047877 ~ 15053622 (+)
LOC120556433 psma4,psa4,LOC106562664 other downstream 441168 15441455 ~ 15446492 (+)
LOC120556001 rbpms2,LOC107381790,LOC103368877,LOC104957780 other downstream 474860 15475147 ~ 15486451 (+)
LOC120555788 NA other downstream 2724258 17724545 ~ 17743448 (+)
LOC120556478 LOC103360749,LOC104942123,LOC102301404 other downstream 3561586 18561873 ~ 18575942 (+)

Expression


Co-expression Network