LOC120556161


Basic Information

Item Value
gene id LOC120556161
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 5574792 ~ 5623879 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005638814.1
CTTAACCCAGGGATGCAATGCTGCTTTCTGGCCTTCTGTTTCACCTTAACCTGGAGCCCTGCCTGCCTACGTCTGCCTCAGCTGCCTGTGTGGTGGGAAGTAAAAGAGGAGGAcaaggatgaggaagaggagctgTTCCTCTCTGGTGGGCGATGACATTCCAGCACCTGCACAGAGACAGGAGCAGCTGAGGAGATCCATCCAGGGGGCAGTTTGTTTTCCAGAGAGGAGCGGCAATGGCGGCGGGCCCCTTGATTTATTAGAACCGTGAGCCGAGCGACCGTGATGAAGTGCATTTCCACTTTAAAAAAGACTACACAGCTTCGTCTGGAGAGGGGAGGAAGAAAGTCAAAGAGCGGAGAAGCACACGGGGAGAGAACggtgaagagaagagagagatacGGCAGACATGCATTCAGTTTTTAGTTTATCCAATTTGAAAGGTCTTATAAAAAGCGTTTTCAAATTCCATATTTTGTCTTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005638814.1 True 483 lncRNA 0.50 3 5574792 5623879

Neighbor

gene id symbol gene type direction distance location
znf536 znf536,LOC102211462 coding downstream 230584 5058534 ~ 5344208 (-)
znf507 NA coding downstream 1199494 4351498 ~ 4375298 (-)
dpy19l3 dpy19l3 coding downstream 1241272 4265244 ~ 4333520 (-)
dhcr7 dhcr7 coding downstream 1973359 3590280 ~ 3601433 (-)
LOC120555474 NA coding downstream 2098900 3459107 ~ 3475892 (-)
ccne1 ccne1 coding upstream 6743 5630622 ~ 5643404 (-)
si:ch211-260e23.9 LOC104921431 coding upstream 29575 5653454 ~ 5663254 (-)
LOC120555531 LOC106909328 coding upstream 414546 6038425 ~ 6050689 (-)
LOC120555530 NA coding upstream 436739 6060618 ~ 6067226 (-)
LOC120555529 NA coding upstream 446721 6070600 ~ 6079167 (-)
LOC120556144 NA non-coding downstream 649784 4923506 ~ 4925008 (-)
G25566 NA non-coding downstream 737520 4836633 ~ 4837272 (-)
G25544 NA non-coding downstream 867091 4707411 ~ 4707701 (-)
G25542 NA non-coding downstream 892208 4682181 ~ 4682584 (-)
LOC120556382 NA non-coding downstream 908561 4658549 ~ 4666231 (-)
G25592 NA non-coding upstream 1577 5625456 ~ 5625659 (-)
G25603 NA non-coding upstream 1854 5625733 ~ 5659032 (-)
G25612 NA non-coding upstream 50481 5674360 ~ 5676297 (-)
G25637 NA non-coding upstream 131631 5755510 ~ 5756425 (-)
G25644 NA non-coding upstream 176918 5800797 ~ 5807098 (-)
G25228 NA other downstream 3297701 2275475 ~ 2277091 (-)
cep89 NA other downstream 3833953 1664770 ~ 1740839 (-)
LOC120556047 abcc12,LOC102304683,LOC101479372,LOC102203605 other downstream 3932444 1587544 ~ 1642348 (-)
LOC120556048 abcc12,LOC101479372,LOC101076737,LOC102203605,LOC100701509,LOC102304683 other downstream 4019146 1510165 ~ 1555646 (-)
LOC120555898 mctp2 other downstream 4117684 1410674 ~ 1457108 (-)
LOC120556425 ap2a2,LOC104921433,LOC104965011 other upstream 56163 5680042 ~ 5717433 (-)
LOC120555534 LOC103369663 other upstream 532343 6156222 ~ 6167529 (-)
ankdd1a ankdd1a other upstream 699398 6323277 ~ 6346561 (-)
pop4 pop4,LOC105418436,LOC104960843 other upstream 885380 6509259 ~ 6524355 (-)
tpcn2 tpcn2 other upstream 910163 6534042 ~ 6590639 (-)

Expression


Co-expression Network