Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC120556188 |
| gene name | NA |
| gene type | non-coding |
| species | eurasian perch (Perca fluviatilis) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_053114.1 |
| NCBI id | CM020911.1 |
| chromosome length | 46923577 |
| location | 22159570 ~ 22160895 (+) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| id | name | namespace |
|---|---|---|
| GO:0051056 | regulation of small GTPase mediated signal transduction | biological_process |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005638821.1 | True | 159 | lncRNA | 0.42 | 3 | 22159570 | 22160895 |
| XR_005638822.1 | False | 156 | lncRNA | 0.42 | 3 | 22159570 | 22160895 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC120555860 | NA | coding | upstream | 237694 | 21911406 ~ 21921876 (+) |
| LOC120555410 | LOC102205483,LOC101478550,LOC103365221,LOC100711032,LOC102299296,LOC102798867 | coding | upstream | 450189 | 21699803 ~ 21709381 (+) |
| LOC120556067 | NA | coding | upstream | 477805 | 21674424 ~ 21681765 (+) |
| mrpl16 | mrpl16,LOC102799737 | coding | upstream | 485271 | 21668518 ~ 21674299 (+) |
| tgfbrap1 | tgfbrap1 | coding | upstream | 491853 | 21650745 ~ 21667717 (+) |
| lmo7b | NA | coding | downstream | 29001 | 22189896 ~ 22227106 (+) |
| cdh16 | cdh16 | coding | downstream | 208456 | 22369351 ~ 22407710 (+) |
| rrad | rrad | coding | downstream | 213239 | 22374134 ~ 22377140 (+) |
| nae1 | nae1 | coding | downstream | 272616 | 22433511 ~ 22440373 (+) |
| dync1li2 | dync1li2 | coding | downstream | 310614 | 22471509 ~ 22488379 (+) |
| G29005 | NA | non-coding | upstream | 29992 | 22128964 ~ 22129578 (+) |
| G29004 | NA | non-coding | upstream | 75169 | 22083945 ~ 22084401 (+) |
| G28990 | NA | non-coding | upstream | 270021 | 21886589 ~ 21889549 (+) |
| G28976 | NA | non-coding | upstream | 440746 | 21718488 ~ 21718824 (+) |
| G28880 | cul4a | non-coding | upstream | 521489 | 21636531 ~ 21638081 (+) |
| G29085 | NA | non-coding | downstream | 207234 | 22368129 ~ 22368503 (+) |
| G29101 | NA | non-coding | downstream | 247071 | 22407966 ~ 22408239 (+) |
| G29135 | galns | non-coding | downstream | 373047 | 22533942 ~ 22534868 (+) |
| G29139 | NA | non-coding | downstream | 387805 | 22548700 ~ 22601559 (+) |
| G29176 | NA | non-coding | downstream | 591573 | 22752468 ~ 22753645 (+) |
| gpc5a | gpc5,LOC103365231 | other | upstream | 287545 | 21720034 ~ 21872025 (+) |
| dcun1d2b | dcun1d2,LOC102792160 | other | upstream | 555664 | 21596331 ~ 21603906 (+) |
| tpp2 | tpp2 | other | upstream | 596756 | 21525592 ~ 21562814 (+) |
| grk1a | grk1 | other | upstream | 726423 | 21421110 ~ 21433147 (+) |
| G28826 | NA | other | upstream | 756120 | 21396213 ~ 21403450 (+) |
| ankrd11 | ankrd11 | other | downstream | 603824 | 22764719 ~ 22895007 (+) |
| LOC120555548 | LOC103365626,LOC104942698 | other | downstream | 820888 | 22981783 ~ 22994164 (+) |
| G29292 | NA | other | downstream | 975837 | 23136732 ~ 23137027 (+) |
| igdcc3 | igdcc3 | other | downstream | 1282254 | 23443149 ~ 23517263 (+) |
| G29433 | NA | other | downstream | 1566117 | 23727012 ~ 23732471 (+) |
