LOC120556208


Basic Information

Item Value
gene id LOC120556208
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 11725618 ~ 11728296 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005638825.1
GGAACTCCAAAATTGGAAAGGCATTTTGGAGGTCAGCAGCAACTTTTAAAGCAGCTTCACGGCAGTCTTGAGAAAGGGTTTCAAGACCCAGCAGCAATAACATCAGCCTCAATCAGAATGTCTTGTAAGCCAGCATCTCCAAATCGCTTGCCAATACAGGACAGGAAAGCCATACATGTGTGAAACTCCCCCATTCTAATTGTAATCCCAGATCCTCAGCCATGCTGTGAGATATCTTCTTGACCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005638825.1 True 246 lncRNA 0.45 4 11725618 11728296

Neighbor

gene id symbol gene type direction distance location
minar1 kiaa1024,LOC107562943,LOC102799073 coding upstream 587220 10934633 ~ 11138398 (+)
LOC120555826 NA coding upstream 594146 11129921 ~ 11131472 (+)
shcbp1 shcbp1,LOC104947898,LOC104967817 coding upstream 885469 10789845 ~ 10840149 (+)
LOC120555949 NA coding upstream 980292 10741710 ~ 10745326 (+)
LOC120555948 LOC103462314 coding upstream 1116537 10527838 ~ 10609081 (+)
LOC120556595 NA coding downstream 303325 12031621 ~ 12031728 (+)
LOC120555527 NA coding downstream 827751 12556047 ~ 12562553 (+)
LOC120556313 LOC104939823,LOC100707594,LOC101479997,LOC105924362 coding downstream 1337656 13065952 ~ 13071332 (+)
LOC120556474 NA coding downstream 1361239 13089535 ~ 13091435 (+)
si:cabz01068815.1 NA coding downstream 1416211 13144507 ~ 13176403 (+)
G26817 vps35,LOC102795814 non-coding upstream 109942 11610759 ~ 11615676 (+)
G26816 vps35 non-coding upstream 116301 11606323 ~ 11609317 (+)
G26781 NA non-coding upstream 259450 11465951 ~ 11466168 (+)
LOC120555674 NA non-coding upstream 346118 11378435 ~ 11379500 (+)
G26748 NA non-coding upstream 389811 11335435 ~ 11335807 (+)
G26861 NA non-coding downstream 37371 11765667 ~ 11765967 (+)
G26878 NA non-coding downstream 83387 11811683 ~ 11811942 (+)
LOC120556354 NA non-coding downstream 210778 11939074 ~ 11939803 (+)
G26890 NA non-coding downstream 232395 11960691 ~ 11961733 (+)
G26893 NA non-coding downstream 235275 11963571 ~ 11963859 (+)
aldh1a3 aldh1a3,LOC106562593,LOC103357544,LOC104941118 other upstream 1865618 9814697 ~ 9860000 (+)
asb7 asb7,LOC102792420 other upstream 2048591 9653578 ~ 9677027 (+)
adamts17 adamts17 other upstream 2121156 9391108 ~ 9604462 (+)
cers3a cers3,LOC102798777 other upstream 2347007 9333229 ~ 9378611 (+)
G26236 NA other upstream 2570275 9068729 ~ 9155343 (+)
lto1 oraov1 other downstream 174976 11903272 ~ 11912722 (+)
G27086 NA other downstream 1381461 13109757 ~ 13110339 (+)
LOC120556202 NA other downstream 1506939 13235235 ~ 13237819 (+)
slc35c1 slc35c1 other downstream 1943181 13671477 ~ 13676613 (+)
lrrc4cb LOC104946080,LOC107396660,LOC103367510,LOC108234802,LOC101071141 other downstream 2081639 13809935 ~ 13856423 (+)

Expression


Co-expression Network