LOC120556354


Basic Information

Item Value
gene id LOC120556354
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 11939074 ~ 11939803 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005638841.1
ttttttttaattcttcttgGTGAAAGCAACGCAGGTGTTTCGTTTTTTCAGCAATACCTACTAGTGGCTTCCTCAACAAAGACCTCTGAAGAAAAGAGGATTCGTTTCTACAGAAATGGCTGCGTTTGtttgcgtcattAGGTGATTTTACAAAGAGCTGGGACAATGTAGCTGTGTTAGTTGATGAAACACTTATACCACAAGagctgTGTAGCCCGATCCTACAGACCCCAACACAccagaaca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005638841.1 True 246 lncRNA 0.41 4 11939074 11939803

Neighbor

gene id symbol gene type direction distance location
minar1 kiaa1024,LOC107562943,LOC102799073 coding upstream 800676 10934633 ~ 11138398 (+)
LOC120555826 NA coding upstream 807602 11129921 ~ 11131472 (+)
shcbp1 shcbp1,LOC104947898,LOC104967817 coding upstream 1098925 10789845 ~ 10840149 (+)
LOC120555949 NA coding upstream 1193748 10741710 ~ 10745326 (+)
LOC120555948 LOC103462314 coding upstream 1329993 10527838 ~ 10609081 (+)
LOC120556595 NA coding downstream 91818 12031621 ~ 12031728 (+)
LOC120555527 NA coding downstream 616244 12556047 ~ 12562553 (+)
LOC120556313 LOC104939823,LOC100707594,LOC101479997,LOC105924362 coding downstream 1126149 13065952 ~ 13071332 (+)
LOC120556474 NA coding downstream 1149732 13089535 ~ 13091435 (+)
si:cabz01068815.1 NA coding downstream 1204704 13144507 ~ 13176403 (+)
G26878 NA non-coding upstream 127132 11811683 ~ 11811942 (+)
G26861 NA non-coding upstream 173107 11765667 ~ 11765967 (+)
LOC120556208 NA non-coding upstream 210778 11725618 ~ 11728296 (+)
G26817 vps35,LOC102795814 non-coding upstream 323398 11610759 ~ 11615676 (+)
G26816 vps35 non-coding upstream 329757 11606323 ~ 11609317 (+)
G26890 NA non-coding downstream 20888 11960691 ~ 11961733 (+)
G26893 NA non-coding downstream 23768 11963571 ~ 11963859 (+)
G26903 NA non-coding downstream 175039 12114842 ~ 12115122 (+)
G26911 NA non-coding downstream 264945 12204748 ~ 12205002 (+)
G26913 NA non-coding downstream 270787 12210590 ~ 12210862 (+)
lto1 oraov1 other upstream 26352 11903272 ~ 11912722 (+)
aldh1a3 aldh1a3,LOC106562593,LOC103357544,LOC104941118 other upstream 2079074 9814697 ~ 9860000 (+)
asb7 asb7,LOC102792420 other upstream 2262047 9653578 ~ 9677027 (+)
adamts17 adamts17 other upstream 2334612 9391108 ~ 9604462 (+)
cers3a cers3,LOC102798777 other upstream 2560463 9333229 ~ 9378611 (+)
G27086 NA other downstream 1169954 13109757 ~ 13110339 (+)
LOC120556202 NA other downstream 1295432 13235235 ~ 13237819 (+)
slc35c1 slc35c1 other downstream 1731674 13671477 ~ 13676613 (+)
lrrc4cb LOC104946080,LOC107396660,LOC103367510,LOC108234802,LOC101071141 other downstream 1870132 13809935 ~ 13856423 (+)
bbox1 bbox1,LOC102798250 other downstream 2768759 14708562 ~ 14735176 (+)

Expression


Co-expression Network