LOC120556388


Basic Information

Item Value
gene id LOC120556388
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 9351308 ~ 9354489 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005638849.1
AttgaattgaacattttaaatgatcgAATTAAGTTTGGTCACTACCGGAAATGGTATATTTGAATCAAATGGCGCCAGGAAGTGTAGGTGGCACTTCCCGGGCACTGACACCAAccgtttatatactgtctatctATGCTGCCAACACAGCCAAACTGTTTCAACAAGGACATCGCCAAAACAAGAAGAATGTTGAGTATGTGTTGGCTGCGTGCAGGATTAATTCTACAGCAGCCATGTGTTGTCTTCTTCACAAAAAAGATCCTATTTGAACAGCATACACAATCAAATGCTTTATAGTGGGCATGGATGAAGACGCCATCAACGAGGCCACTGAAGAAACCAGCGTTGGGATTTATGTTCTTAAAGAACATGCTTCAAGTGATGAACCAGGGGACATTGGTATTGTCCTTGAAGGCATCAAGATGTTGCAAGATCTTTATAATGTAGCATTACCTGTTGCTACGCTGTTTGGACTAATGTACAGTATGCCCTGAACTTCAGCTACCCTGCTTGCCTTTGATCCAAAAGATTTGCATGGAACTTGAGGAGGGAAACTTACCAACAAAGCACTTGCTCTAAAAAACAGGCTCTTCCAGTGAAAGGGCCAGAGAGACTGCGCCATCAACCAAACAGCGTAGTTGTCCCTAAAGGCATCGTTGGTATGGCTGTACTCTTTGgactagttttttttgtttgaattaaCTGGACAGGATTTACATGGAGCTGCATGGAAATAACCTTTTGCAAACCAAGCAAAAGTTTTCTCTCTAGAAAACAGACTACATTAAAGACCAACAGGCATCTTTGGTACTGCTATACCAGatggaatttatttatttttttacacaactattttgaaaactgagtgcacaatttaaagggtaacttcgggtttttcaacttggaccctatgttcctctGTTGTTACTGTTGGGAACAACGATCTtcgacattggtccagtataaagcgagtaggcctgtcacgataacaagttttgctggacgataaattgtcccagaaattattgtgATAAACCATAATCTTGTCGtcctgagaccattttcatctaatataatgataattgcataataatgcaggtacactttttcaaagatcaataaacttttatttctaaggAATTTTTAACACTAGA

Function

GO: NA

KEGG:

id description
ko04113 Meiosis - yeast

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005638849.1 True 1157 lncRNA 0.39 3 9351308 9354489

Neighbor

gene id symbol gene type direction distance location
fah fah coding downstream 26020 9308597 ~ 9325288 (-)
arnt2 arnt2 coding downstream 121731 9153242 ~ 9229577 (-)
LOC120555843 LOC104937892 coding downstream 2044978 7304084 ~ 7306330 (-)
LOC120555919 NA coding downstream 2298831 7045853 ~ 7052477 (-)
hdgfl3 LOC103366351,LOC102309090,LOC101465811,LOC100694012,LOC106907470 coding downstream 2309167 7028566 ~ 7042141 (-)
chsy1 chsy1 coding upstream 773489 10127978 ~ 10231722 (-)
selenos NA coding upstream 878975 10233464 ~ 10241227 (-)
zgc:113274 NA coding upstream 889635 10244124 ~ 10245386 (-)
snrpa1 snrpa1 coding upstream 904742 10259231 ~ 10292924 (-)
ano9b ano9,LOC103369658,LOC100691858,LOC102197938 coding upstream 1286449 10640938 ~ 10731901 (-)
G26322 NA non-coding downstream 6447 9343545 ~ 9344861 (-)
G26299 NA non-coding downstream 53558 9296758 ~ 9297750 (-)
G26278 NA non-coding downstream 103884 9247107 ~ 9247424 (-)
G26232 NA non-coding downstream 514399 8836064 ~ 8836909 (-)
LOC120556469 NA non-coding downstream 792554 8552479 ~ 8558754 (-)
G26355 NA non-coding upstream 254946 9609435 ~ 9610939 (-)
G26371 NA non-coding upstream 286707 9641196 ~ 9679100 (-)
G26381 NA non-coding upstream 340046 9694535 ~ 9694880 (-)
G26383 NA non-coding upstream 372703 9727192 ~ 9727780 (-)
G26385 NA non-coding upstream 382322 9736811 ~ 9737046 (-)
G26298 NA other downstream 54562 9295068 ~ 9296746 (-)
LOC120555589 cemip other downstream 372164 8759601 ~ 8979144 (-)
tlnrd1 mesdc1 other downstream 592500 8733419 ~ 8758808 (-)
il16 LOC102796330 other downstream 653686 8630608 ~ 8697622 (-)
LOC120555934 NA other downstream 854673 8494353 ~ 8496635 (-)
mtfmt mtfmt,LOC102776665,LOC102776373 other upstream 2122017 11476506 ~ 11510300 (-)
LOC120555651 NA other upstream 2288742 11643231 ~ 11669269 (-)
G26891 NA other upstream 2606212 11960701 ~ 11961772 (-)
G26924 LOC108281047 other upstream 2950050 12304539 ~ 12304824 (-)
G27075 LOC104939823,LOC100707594 other upstream 3715507 13069996 ~ 13095766 (-)

Expression


Co-expression Network