LOC120556428


Basic Information

Item Value
gene id LOC120556428
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 17070550 ~ 17077793 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005638859.1
GCCTTGTTGCCTCCCTGCTTGCCTCCCTGGACTGTCCATGATCATCATGATGAATTCATAAAACTTGCTGCATTCTTGATTGAGATGGAGCAGTGGAGAAAACAAGAGTGACGTAGAGAAGAAAAGCAATATCCACAACTGGAGAGGTCCTCACATTCGTGAATCTTTCTCCCATCCATGAGAAAGCACAGGAATTGTGGGGGTAATCCTAGAACACGTGAAGGCCAGTGCCACTCTCACCTGTCTCTCGCCCACAGCCCCCTCtcgtctcctcctccatctcccaaGGGAAAGATGCCCACACTTCTCTCATGACAGATCTGTTCCCTGCAGATCTGAACTGCAAATCCTGCCTCTCTTCAAGGTGACAGACTGTTGTATGCCCAATTCGCCCCTAAAGCACTCCCCCGATGGCTTTCTCACACTCTCTTCAGtgcaaagcacacacacacgattccCACAGATCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005638859.1 True 467 lncRNA 0.50 3 17070550 17077793

Neighbor

gene id symbol gene type direction distance location
LOC120556405 kif23,LOC104944434 coding upstream 343859 16701035 ~ 16726691 (+)
paqr5b paqr5 coding upstream 407821 16651817 ~ 16662729 (+)
glceb glce coding upstream 427703 16581385 ~ 16642847 (+)
coro2ba coro2b coding upstream 525759 16495835 ~ 16544791 (+)
LOC120556141 LOC104920616,LOC104955854,LOC103374661,LOC102791325,LOC102298654 coding upstream 657979 16411033 ~ 16412571 (+)
slc39a1 LOC104951142,LOC103353202,LOC105936366 coding downstream 419627 17497420 ~ 17505106 (+)
rlbp1a LOC104951141,LOC103353204 coding downstream 430312 17508105 ~ 17513164 (+)
LOC120556258 LOC103353205,LOC104951143 coding downstream 457034 17534827 ~ 17548420 (+)
LOC120556259 LOC104951145 coding downstream 472197 17549990 ~ 17556201 (+)
mibp2 LOC100693649,LOC103353206,LOC102204817 coding downstream 485938 17563731 ~ 17566207 (+)
G27819 NA non-coding upstream 44225 16966545 ~ 17026325 (+)
G27810 NA non-coding upstream 120619 16872015 ~ 16949931 (+)
LOC120556216 NA non-coding upstream 262769 16730564 ~ 16807781 (+)
LOC120556471 NA non-coding upstream 369728 16698971 ~ 16700822 (+)
LOC120556470 NA non-coding upstream 388697 16672602 ~ 16681853 (+)
G27840 NA non-coding downstream 94462 17172255 ~ 17172471 (+)
G27877 NA non-coding downstream 214922 17292715 ~ 17294951 (+)
G27879 NA non-coding downstream 236095 17313888 ~ 17314090 (+)
G27884 NA non-coding downstream 303586 17381379 ~ 17465644 (+)
G27895 NA non-coding downstream 416955 17494748 ~ 17495773 (+)
LOC120556001 rbpms2,LOC107381790,LOC103368877,LOC104957780 other upstream 1584099 15475147 ~ 15486451 (+)
LOC120556433 psma4,psa4,LOC106562664 other upstream 1624058 15441455 ~ 15446492 (+)
LOC120556271 tmem138,LOC104922799,LOC102296598,LOC102204478,LOC104956289,LOC103368539,LOC102790175,LOC102222702 other upstream 2016928 15047877 ~ 15053622 (+)
kcna4 kcna4 other upstream 2105488 14889390 ~ 14965062 (+)
bbox1 bbox1,LOC102798250 other upstream 2335374 14708562 ~ 14735176 (+)
LOC120555788 NA other downstream 646752 17724545 ~ 17743448 (+)
LOC120556478 LOC103360749,LOC104942123,LOC102301404 other downstream 1484080 18561873 ~ 18575942 (+)
LOC120555697 NA other downstream 1996515 19074308 ~ 19087064 (+)
G28581 NA other downstream 2409453 19487246 ~ 19487533 (+)
ercc3 ercc3 other downstream 2434563 19512356 ~ 19520218 (+)

Expression


Co-expression Network