LOC120556588


Basic Information

Item Value
gene id LOC120556588
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 25966177 ~ 25966255 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005638875.1
TGATGACAAATCTCCGGAATCTCTGTATTTCTTTGATGAAACACTTGAACCTTTTTTCTGATGACTGCTTTTTACAATC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005638875.1 True 79 snoRNA 0.34 1 25966177 25966255

Neighbor

gene id symbol gene type direction distance location
LOC120556589 NA coding upstream 1419 25964679 ~ 25964758 (+)
gcshb gcsh coding upstream 8370 25953798 ~ 25957807 (+)
kars1 kars,LOC102775760 coding upstream 23346 25931276 ~ 25942831 (+)
dkk3a dkk3 coding upstream 155673 25805445 ~ 25810504 (+)
btbd10b btbd10,LOC103362377 coding upstream 315564 25639529 ~ 25650613 (+)
cpne7 cpne7 coding downstream 5678 25971933 ~ 26003635 (+)
zgc:162592 LOC104919466,LOC102228142,LOC104964798,LOC103150715,LOC108251387,LOC106918128 coding downstream 84608 26050863 ~ 26054674 (+)
dhx38 dhx38 coding downstream 99612 26065867 ~ 26081611 (+)
hnf4b NA coding downstream 648567 26614822 ~ 26624049 (+)
marveld3 marveld3,LOC103375894 coding downstream 733584 26699839 ~ 26702356 (+)
G29922 NA non-coding upstream 36204 25929747 ~ 25929973 (+)
G29915 NA non-coding upstream 103786 25861728 ~ 25862391 (+)
G29868 NA non-coding upstream 278069 25685840 ~ 25688108 (+)
G29851 NA non-coding upstream 329052 25624948 ~ 25637125 (+)
G29849 NA non-coding upstream 343725 25622189 ~ 25622452 (+)
G29964 NA non-coding downstream 39008 26005263 ~ 26006950 (+)
G29974 NA non-coding downstream 91673 26057928 ~ 26059434 (+)
G29975 LOC103361962,LOC107659108,LOC101069992,LOC107565377 non-coding downstream 94936 26061191 ~ 26063421 (+)
G30003 NA non-coding downstream 151910 26118165 ~ 26118521 (+)
G30006 NA non-coding downstream 198321 26164576 ~ 26164930 (+)
nfat5b nfat5 other upstream 38451 25883454 ~ 25927726 (+)
pkd1l2a vat1l,pkd1l2,LOC102776808 other upstream 82817 25855839 ~ 25883360 (+)
sox6 sox6,LOC103363464 other upstream 1510489 24320064 ~ 24455688 (+)
plekha7b NA other upstream 1651532 24235723 ~ 24314645 (+)
G29433 NA other upstream 2233706 23727012 ~ 23732471 (+)
LOC120556198 LOC103371916,LOC104965843 other downstream 1329502 27295757 ~ 27316181 (+)
nedd4a nedd4,LOC103371920,LOC102785817 other downstream 1352115 27318370 ~ 27351837 (+)
LOC120555577 NA other downstream 1442785 27409040 ~ 27410250 (+)
vrk3 NA other downstream 1460033 27426288 ~ 27440414 (+)
LOC120555924 LOC103398348,LOC104965831,LOC103374185 other downstream 1490161 27456416 ~ 27464759 (+)

Expression


Co-expression Network