LOC120556589


Basic Information

Item Value
gene id LOC120556589
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 25964679 ~ 25964758 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005638876.1
TGATGAGAAATCTCCGGAATCTCTGTATTTACTTGATGAATACTTTGAACCTTTTTATCTGATGACTACTTTTTGTTACT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005638876.1 True 80 snoRNA 0.31 1 25964679 25964758

Neighbor

gene id symbol gene type direction distance location
gcshb gcsh coding upstream 6872 25953798 ~ 25957807 (+)
kars1 kars,LOC102775760 coding upstream 21848 25931276 ~ 25942831 (+)
dkk3a dkk3 coding upstream 154175 25805445 ~ 25810504 (+)
btbd10b btbd10,LOC103362377 coding upstream 314066 25639529 ~ 25650613 (+)
ctr9 ctr9 coding upstream 547893 25407601 ~ 25416786 (+)
LOC120556588 NA coding downstream 1419 25966177 ~ 25966255 (+)
cpne7 cpne7 coding downstream 7175 25971933 ~ 26003635 (+)
zgc:162592 LOC104919466,LOC102228142,LOC104964798,LOC103150715,LOC108251387,LOC106918128 coding downstream 86105 26050863 ~ 26054674 (+)
dhx38 dhx38 coding downstream 101109 26065867 ~ 26081611 (+)
hnf4b NA coding downstream 650064 26614822 ~ 26624049 (+)
G29922 NA non-coding upstream 34706 25929747 ~ 25929973 (+)
G29915 NA non-coding upstream 102288 25861728 ~ 25862391 (+)
G29868 NA non-coding upstream 276571 25685840 ~ 25688108 (+)
G29851 NA non-coding upstream 327554 25624948 ~ 25637125 (+)
G29849 NA non-coding upstream 342227 25622189 ~ 25622452 (+)
G29964 NA non-coding downstream 40505 26005263 ~ 26006950 (+)
G29974 NA non-coding downstream 93170 26057928 ~ 26059434 (+)
G29975 LOC103361962,LOC107659108,LOC101069992,LOC107565377 non-coding downstream 96433 26061191 ~ 26063421 (+)
G30003 NA non-coding downstream 153407 26118165 ~ 26118521 (+)
G30006 NA non-coding downstream 199818 26164576 ~ 26164930 (+)
nfat5b nfat5 other upstream 36953 25883454 ~ 25927726 (+)
pkd1l2a vat1l,pkd1l2,LOC102776808 other upstream 81319 25855839 ~ 25883360 (+)
sox6 sox6,LOC103363464 other upstream 1508991 24320064 ~ 24455688 (+)
plekha7b NA other upstream 1650034 24235723 ~ 24314645 (+)
G29433 NA other upstream 2232208 23727012 ~ 23732471 (+)
LOC120556198 LOC103371916,LOC104965843 other downstream 1330999 27295757 ~ 27316181 (+)
nedd4a nedd4,LOC103371920,LOC102785817 other downstream 1353612 27318370 ~ 27351837 (+)
LOC120555577 NA other downstream 1444282 27409040 ~ 27410250 (+)
vrk3 NA other downstream 1461530 27426288 ~ 27440414 (+)
LOC120555924 LOC103398348,LOC104965831,LOC103374185 other downstream 1491658 27456416 ~ 27464759 (+)

Expression


Co-expression Network