trnat-agu_3


Basic Information

Item Value
gene id trnat-agu_3
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 1833321 ~ 1833394 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>unassigned_transcript_137
GGCGCCGTGGCTTAGTTGGTTAAAGCGCCTGTCTAGTAAACAGGAGAtcctgggttcgaatcccagcGGTGCCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_137 True 74 tRNA 0.55 1 1833321 1833394

Neighbor

gene id symbol gene type direction distance location
lrp3 lrp3 coding downstream 1375 1818431 ~ 1831946 (-)
rhpn2 rhpn2 coding downstream 58900 1744192 ~ 1774421 (-)
LOC120555617 NA coding downstream 325413 1459164 ~ 1507908 (-)
tdp1 tdp1 coding downstream 630239 1193040 ~ 1203082 (-)
LOC120556384 LOC104919714 coding downstream 642435 1176462 ~ 1190886 (-)
dnaja2a dnaja2 coding upstream 1694 1835088 ~ 1846922 (-)
LOC120556324 neto2 coding upstream 15460 1848854 ~ 1871276 (-)
itfg1 itfg1 coding upstream 39437 1872831 ~ 2039002 (-)
cdh8 cdh8 coding upstream 1009049 2842443 ~ 2961584 (-)
LOC120555903 NA coding upstream 1329501 3162895 ~ 3163677 (-)
G25113 NA non-coding downstream 170835 1661728 ~ 1662486 (-)
G25112 NA non-coding downstream 171624 1661359 ~ 1661697 (-)
G25111 NA non-coding downstream 171968 1660832 ~ 1661353 (-)
G25110 NA non-coding downstream 172586 1660494 ~ 1660735 (-)
G25039 NA non-coding downstream 374779 1458037 ~ 1458542 (-)
G25246 NA non-coding upstream 615033 2448427 ~ 2449619 (-)
G25256 NA non-coding upstream 815834 2649228 ~ 2649449 (-)
G25275 NA non-coding upstream 996143 2829537 ~ 2829747 (-)
G25276 NA non-coding upstream 1061321 2894715 ~ 2895109 (-)
G25277 NA non-coding upstream 1083518 2916912 ~ 2917542 (-)
cep89 NA other downstream 92482 1664770 ~ 1740839 (-)
LOC120556047 abcc12,LOC102304683,LOC101479372,LOC102203605 other downstream 190973 1587544 ~ 1642348 (-)
LOC120556048 abcc12,LOC101479372,LOC101076737,LOC102203605,LOC100701509,LOC102304683 other downstream 277675 1510165 ~ 1555646 (-)
LOC120555898 mctp2 other downstream 376213 1410674 ~ 1457108 (-)
pnoca NA other downstream 728154 1061104 ~ 1105167 (-)
G25228 NA other upstream 442081 2275475 ~ 2277091 (-)
LOC120556425 ap2a2,LOC104921433,LOC104965011 other upstream 3846648 5680042 ~ 5717433 (-)
LOC120555534 LOC103369663 other upstream 4322828 6156222 ~ 6167529 (-)
ankdd1a ankdd1a other upstream 4489883 6323277 ~ 6346561 (-)
pop4 pop4,LOC105418436,LOC104960843 other upstream 4675865 6509259 ~ 6524355 (-)

Expression


Co-expression Network