trnaw-cca_1


Basic Information

Item Value
gene id trnaw-cca_1
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 43527581 ~ 43527653 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>unassigned_transcript_147
GACCTTGTGGCGTTATCGGTAGCGCCTCTGACTCCAGATCAGAAGGTTGCGTGTTCGAATCACGTCGGGGTCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_147 True 73 tRNA 0.58 1 43527581 43527653

Neighbor

gene id symbol gene type direction distance location
LOC120555671 NA coding downstream 31377 43479602 ~ 43496204 (-)
LOC120556173 NA coding downstream 90478 43434315 ~ 43437103 (-)
LOC120555411 NA coding downstream 98426 43417323 ~ 43429155 (-)
LOC120555495 LOC104938484,LOC103359668,LOC102209123,LOC101072180 coding downstream 119860 43403538 ~ 43407721 (-)
LOC120555429 LOC104938483 coding downstream 127136 43396425 ~ 43400445 (-)
LOC120556093 NA coding upstream 182047 43709700 ~ 43756173 (-)
si:ch211-71n6.4 LOC100691126,LOC102786012,LOC102297160,LOC102213240,LOC101463620 coding upstream 290079 43817732 ~ 43848899 (-)
trnav-uac NA coding upstream 409323 43936976 ~ 43937048 (-)
LOC120556524 NA coding upstream 525520 44053173 ~ 44054851 (-)
LOC120556335 NA coding upstream 918530 44446183 ~ 44477267 (-)
G33960 NA non-coding downstream 7686 43518953 ~ 43519895 (-)
G33918 NA non-coding downstream 37656 43489721 ~ 43489925 (-)
G33886 NA non-coding downstream 114299 43412635 ~ 43413282 (-)
G33885 NA non-coding downstream 116167 43410644 ~ 43411414 (-)
G33875 NA non-coding downstream 189794 43336810 ~ 43337787 (-)
G33976 NA non-coding upstream 103906 43631559 ~ 43631854 (-)
G33981 NA non-coding upstream 146996 43674649 ~ 43680211 (-)
G34002 NA non-coding upstream 248895 43776548 ~ 43777594 (-)
G34003 NA non-coding upstream 249615 43777268 ~ 43845807 (-)
G34008 NA non-coding upstream 287094 43814747 ~ 43840755 (-)
G33914 NA other downstream 70734 43452712 ~ 43456847 (-)
G33847 NA other downstream 312594 43214634 ~ 43214987 (-)
G33796 NA other downstream 536811 42985223 ~ 42990770 (-)
G33711 NA other downstream 1125445 42399291 ~ 42402136 (-)
sirt3 sirt3 other downstream 1762685 41757627 ~ 41764896 (-)
LOC120556522 LOC103374105,LOC102297981 other upstream 239038 43766691 ~ 43813225 (-)
G34078 NA other upstream 512707 44040360 ~ 44089691 (-)
LOC120556527 LOC102787635,LOC101476187,LOC100691227,LOC106610718 other upstream 1264329 44791982 ~ 44915666 (-)
G34518 NA other upstream 1611003 45138656 ~ 45271013 (-)
G34551 NA other upstream 1760152 45287805 ~ 45294207 (-)

Expression


Co-expression Network