LOC120557002 (LOC103372952)


Basic Information

Item Value
gene id LOC120557002
gene name LOC103372952
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 756441 ~ 835967 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU46855
tggaggaagagaagagaggaggtcAGCGAACACAAGAAAAGAAGGAGTAAGAAAAGGAGTAAGAGAGTGGACAaactggaggaggaagagaagaagaagaagaagaagaagaggaggggagCAGAGTGCGAGAGTTCAGAAAAAGGAAAGGAGCAAGAAGCTAGAGAATAGCAATGTGACTGTGACGGAAGTGATTcgaaggaggagagaggcaaaaaaaagaagagaaaagagaagtgaTCACACATGCTgtgtgaggaggaggaaagaaaaggaCAGCTGATGTGACTTTTGGGGTAAAAACAAAGTGACCAGGAAGAGAAGAACAAACgagaggagcagagaggagagataACTGGCACTTGAACTGTGTTTGAGGAGCAGATAATCTGATCTTGATGATGGGCTGCTGTCTGTTTGTTTACTATCGGaagaagaggaagcagGCCAGCAGAGATGCCGACTCGCTCAGTCTCTGCAGTCTGGACATCAACGAGCCCAGCACCAAGCGCAGTAAACTGGTGTCCAGGGTGAGCTCTCTGGCCGGCCTGCTGCAGCCCGTTAAGACCGCACCGCTGAAGAGGATTGGCCAGACCCTGCAGGTGAACCTCCACTGCCATGTCTCCACCAGTCAATAAG
>XM_039796998.1
CCCACAAGAACACGAAGCTGAGCAGTCAGCCGTTCGGCGGCTTGACCTTTGACACCGACTACATGGTTCGCGTGGTTCCTTTCCCGACTCTGATGAACGAGAGCttcttccctccatccttcctccGCACCAACTCATGTGAAGTCCTCCTAGGATCAGACAACCAGGTCTGCAGACCCTTCTGGAAGCCAAAGACCCTGAACGTGTCTCAGCTGGGCTGCAACCTCCACGTGGCGTTCGACCAGGCGCCGGCCTCCTTCGGCTTCGGCTTCTACTTCCTGTACTACAAACTACGGCAGGACGGGCCCTTCAGACAGCAGCGCTGCAAGCCAGATGTGAACCAGCCCAGAACCACATGCATCCTCCAGAACCTCACCCCAGGGACCTACACTATAGAGCTGAGAGACGACGGTAACACGACCAGGAGGCAAACTCAGTACCATGTCAGCCaggTCCACTCCCCCTGGGCGGGGCCTATTCGTGCCATGGCCATCACAGTTCCTCTGGTCATCATGTCTGCCTTCGCCACTCTCTTCACTGTCATGTGTCGCAAGAAGCAGCAAGAAAACATCTACAGCCAGCTGGACGAGGAGAGCAGCGAGTCGTCCAATCACAGTGCGGCGTTGAACACGGAGCGGCCGTGGCCCCGCCCCAAGGTCTTCATCTGTTACTCCAACAGAGACTGTCCCAAACACACCAGCGTCATCCAGAGCTTCGCCTACTTCCTGCAGGACTTCTGCAGCTGTGAGGTTGTGTTGGACCTGTGGGAACACCTGGAGATGTGCAGAGAGGGTCAGATGTCGTGGCTCAGCAGACAGCTGGACGAAGCTGACTTCATCATCACCATCTGTTCTAGAGGCCTACGCTACTACGTAGAGAAGAAGAGCCACAGAGGGAAGACACCGGTCAGTCGccgtagtaacagcagcagcagctctccGATTGGTGGATCGGGCGGTGACCTGTTCATCGTGGGCGTGGCCATGATCGCTGAGAAGCTGCGGCTGGCGAATCAGAGCCAGGGGGGCGGAGCTCAGGAGCTGAACCGCTACATGGCGGTTTACTTCGACTATTCCACGGAAAAGGACATCCCCACCATGCTGAGTCTGGCTCCCAGGTTTAAGCTGATGGACCAGCTGCCTCAGCTCTTCAGTCGGCTCCACTCCAGCCAGTCCAGTTTGGCTGATCGTGATTCGCAGCCTCTCAACGTCTCCAGGAGGAACTACTTCAGGAGCAGGTCCGGACGCTCGCTCTACGTGTCCATCTGCAACATGCACCAGCACATCAGCCAAAACGCTGACTGGTTCGAGAAGCAGCTGGCTCCTTCAGGAgcttcctctgcctcctcctccaaacctgctcctcctctccctGCTGTCCCGGCTCCGAGCCCTCCTCCAAAGCCTCCCTGCCCCTCCTCCTCGTCTCTACCGGAGCAGAGGTTTGACTCAGGCTTGGTGCTGAACGAGGTGGTGGTGAATACACCGTCCCCGGAGGGAGCATCGAGGAGGAACATGCTCCTGCTGGCCTCTGGTTCCAGTCCCAGCCTTAACCTAGGCCCCAGCCTCAGTCCCTGTCCCAGTCCTGGTCCCTGTCCCAGTCCAGGCCTGCCACACTGCTCTCTGGCCACGCTGGGACCCACTTCAAGGTCCACTTCTGGAATATCTGGACTGTTACCTGAAGAatcgtcctcctcctcttcctcctcctcctcctccttcctcctcctctgctccctCCATTCTCCAGGATGGGGTGTGCCCTGTCCACTCCCAGGCAGAAGAAGGCCATCATTCCCCTCCAGAGCTCCCACCCCCTCGTGATTCGGGCATCTATGAGTCGTCTGTCCCGTCCTCAGAGCTCTCCATTCCCCTAATGGAGGGTCTGTCACATGACCaggctgactcctcctccctgGCAGACAGCGAATCATCTTCTTCGGGGCTGGgTCGAAGCTGCAGAAGAAAAcatcctccttctctcttctctctcctgaCAGCTGGTCCCTCAGAGGGaagaagaggaagcagGCCAGCAGAGATGCCGACTCGCTCAGTCTCTGCAGTCTGGACATCAACGAGCCCAGCACCAAGCGCAGTAAACTGGTGTCCAGGGTGAGCTCTCTGGCCGGCCTGCTGCAGCCCGTTAAGACCGCACCGCTGAAGAGGATTGGCCAGACCCTGCAGGTGAACCTCCACTGCCATG

Function

NR:

description
PREDICTED: interleukin-17 receptor D-like

GO: NA

KEGG:

id description
K05167 IL17RD, SEF; interleukin 17 receptor D

RNA

RNA id representative length rna type GC content exon number start site end site
TU46855 False 639 TUCP 0.49 3 806843 835967
XM_039796998.1 True 2205 mRNA 0.59 15 756441 835949

Neighbor

gene id symbol gene type direction distance location
pde12 pde12 coding upstream 24122 715142 ~ 732319 (+)
ip6k1 ip6k1,LOC107662926 coding upstream 282849 456073 ~ 473592 (+)
slmapa slmap,LOC102793115 coding upstream 655991 21251 ~ 100450 (+)
wnt4 wnt4 coding downstream 342694 1178661 ~ 1210396 (+)
LOC120557878 sox13 coding downstream 454106 1290073 ~ 1350322 (+)
si:ch211-112f3.4 NA coding downstream 565566 1401533 ~ 1407626 (+)
LOC120556832 NA coding downstream 817817 1653784 ~ 1655695 (+)
pmepa1 pmepa1 coding downstream 883487 1719454 ~ 1780723 (+)
G35085 NA non-coding upstream 39511 709643 ~ 716930 (+)
G35082 NA non-coding upstream 51365 704315 ~ 705076 (+)
G35016 NA non-coding upstream 99066 656168 ~ 657375 (+)
G35012 NA non-coding upstream 109533 645141 ~ 646908 (+)
G35008 NA non-coding upstream 112525 623929 ~ 643916 (+)
G35147 NA non-coding downstream 616 836583 ~ 836901 (+)
G35149 NA non-coding downstream 5554 841521 ~ 853049 (+)
G35151 NA non-coding downstream 53726 889693 ~ 889924 (+)
G35155 NA non-coding downstream 135051 971018 ~ 971263 (+)
G35161 NA non-coding downstream 174854 1010821 ~ 1011073 (+)
gmppb gmppb other upstream 5970 737925 ~ 750471 (+)
G35090 NA other upstream 21297 732630 ~ 735144 (+)
G35077 NA other upstream 45304 684498 ~ 711137 (+)
G35076 rps23,rs23,LOC106566095,LOC107578001 other upstream 75230 673115 ~ 681211 (+)
G34987 NA other upstream 203166 550996 ~ 553275 (+)
G35175 NA other downstream 313733 1149700 ~ 1150241 (+)
G35191 NA other downstream 388116 1224083 ~ 1229168 (+)
G35295 LOC107380983,LOC102290002,LOC108241855,LOC108250349,LOC106456447,LOC101470105,LOC102800009,LOC102214284,LOC101480046,LOC102215411,LOC102307835 other downstream 975657 1811624 ~ 1837655 (+)
asip1 NA other downstream 1188257 2024224 ~ 2052143 (+)
LOC120556786 NA other downstream 1549648 2385615 ~ 2387974 (+)

Expression


Co-expression Network