G35295 (LOC107380983,LOC102290002,LOC108241855,LOC108250349,LOC106456447,LOC101470105,LOC102800009,LOC102214284,LOC101480046,LOC102215411,LOC102307835)


Basic Information

Item Value
gene id G35295
gene name LOC107380983,LOC102290002,LOC108241855,LOC108250349,LOC106456447,LOC101470105,LOC102800009,LOC102214284,LOC101480046,LOC102215411,LOC102307835
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 1811624 ~ 1837655 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU47149
AGAAATACGGTGCTTCAGAGaaggctcttctgaggctgctgccagtggtcaaagcctccaaaaaagctctactgagtggctgtaacctgtcagagagaagctgtgaagctctgtcctcagttctcagctcccagtcctctagtctgagagagctggacctgagtaacaacaacctgcaggattcaggagggaagctgatctctgatggactgaagagtccacactgcacactggagactctcagactgagtgtctgtaacctgtcagagagaagctgtgaagctctgtcctcagttctcagctcccagtcctctagtctgagagagctggacctgagtaacaacaacctgcaggattcaggagggaagatgatctctgatggactgaagagtccacactgcacactggagactctcagtctgtcaggctgtctgatctcagaggaaggctgttcttctctggtctcagctctgagctccaacccctcccatcttaGAGAGCTGGACCagagctacaatcatccaggagactctGGAGTGAAGCTACTGTCAGCGGGACTGAAGGATCctctctggagactggacactctcagggtggagcctgctggagtcagatggttgacaccaggtctgaggaagtattcctgtgaactcacactcgacacaaacacagtgaacagaaaactcaaactgtctgacaacaacaggaaggtgacattaGTGATGgaggatcagccatatcctgatcatccagagaggtttgactgctggcctcagctgctgtgtagagatggtctgactggtcgctgttactgggaggttgagaggagaggagatg
>TU47150
AGAAATACGGTGCTTCAGAGaaggctcttctgaggctgctgccagtggtcaaagcctccaaaaaagctctactgagtggctgtaacctgtcagagagaagctgtgaagctctgtcctcagttctcagctcccagtcctctagtctgagagagctggacctgagtaacaacaacctgcaggattcaggagggaagctgatctctgatggactgaagagtccacactgcacactggagactctcagtctgtcaggctgtctgatctcagaggaaggctgttcttctctggtctcagctctgagctccaacccctcccatcttaGAGAGCTGGACCagagctacaatcatccaggagactctGGAGTGAAGCTACTGTCAGCGGGACTGAAGGATCctctctggagactggacactctcagggtggagcctgctggagtcagatggttgacaccaggtctgaggaagtattcctgtgaactcacactcgacacaaacacagtgaacagaaaactcaaactgtctgacaacaacaggaaggtgacattaGTGATGgaggatcagccatatcctgatcatccagagaggtttgactgctggcctcagctgctgtgtagagatggtctgactggtcgctgttactgggaggttgagaggagaggagatg
>TU47153
aatgccccccccccccctcctcctttcagggtggagcctgctggagtcagatggttgacaccaggtctgaggaagtattcctgtgaactcacactcgacacaaacacagtgaacagaaaactcaaactgtctgacaacaacaggaaggtgacattaGTGATGgaggatcagccatatcctgatcatccagagaggtttgactgctggcctcagctgctgtgtagagatggtctgactggtcgctgttactgggaggttgagaggagaggagatg
>TU47156
cctgtgtgttgttctgtgtgtttgcagtctgtcaggctgtctgatctcagaggaaggctgttcttctctggtctcagctctgagctccaacccctcccatcttaGAGAGCTGGACCagagctacaatcatccaggagactctGGAGTGAAGCTACTGTCAGCGGGACTGAAGGATCctctctggagactggacactctcagggtggagcctgctggagtcagatggttgacaccaggtctgaggaagtattcctgtgaactcacactcgacacaaacacagtgaacagaaaactcaaactgtctgacaacaacaggaaggtgacattaGTGATGgaggatcagccatatcctgatcatccagagaggtttgactgctggcctcagctgctgtgtagagatggtctgactggtcgctgttactgggaggttgagaggagaggagatg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU47149 True 837 TUCP 0.52 6 1811624 1837655
TU47150 False 663 lncRNA 0.52 5 1811624 1837655
TU47153 False 274 lncRNA 0.52 2 1837259 1837655
TU47156 False 446 lncRNA 0.52 3 1819772 1837655

Neighbor

gene id symbol gene type direction distance location
pmepa1 pmepa1 coding upstream 30901 1719454 ~ 1780723 (+)
LOC120556832 NA coding upstream 155929 1653784 ~ 1655695 (+)
si:ch211-112f3.4 NA coding upstream 403998 1401533 ~ 1407626 (+)
LOC120557878 sox13 coding upstream 461302 1290073 ~ 1350322 (+)
wnt4 wnt4 coding upstream 601228 1178661 ~ 1210396 (+)
LOC120558009 NA coding downstream 6477 1844132 ~ 1853373 (+)
LOC120558223 NA coding downstream 47249 1884904 ~ 1899482 (+)
LOC120558160 NA coding downstream 62619 1900274 ~ 1905748 (+)
chmp4ba chmp4b,LOC101481733,LOC102786921,LOC102203309,LOC104933698,LOC107093444,LOC108243665 coding downstream 75455 1913110 ~ 1926646 (+)
ahcy ahcy coding downstream 100928 1938583 ~ 1966516 (+)
G35268 NA non-coding upstream 23404 1659720 ~ 1788220 (+)
G35285 NA non-coding upstream 60243 1708284 ~ 1751381 (+)
G35283 NA non-coding upstream 99923 1694410 ~ 1711701 (+)
LOC120557079 NA non-coding upstream 113147 1698143 ~ 1698477 (+)
G35263 NA non-coding upstream 153049 1658285 ~ 1658575 (+)
G35272 NA non-coding downstream 7726 1845381 ~ 1880375 (+)
G35304 NA non-coding downstream 40716 1878371 ~ 1879173 (+)
G35314 NA non-coding downstream 68413 1906068 ~ 1912270 (+)
G35316 NA non-coding downstream 81002 1918657 ~ 1918924 (+)
G35321 NA non-coding downstream 216869 2054524 ~ 2055867 (+)
G35191 NA other upstream 582456 1224083 ~ 1229168 (+)
G35175 NA other upstream 661383 1149700 ~ 1150241 (+)
LOC120557002 LOC103372952 other upstream 975657 756441 ~ 835967 (+)
gmppb gmppb other upstream 1061153 737925 ~ 750471 (+)
G35090 NA other upstream 1076480 732630 ~ 735144 (+)
asip1 NA other downstream 186569 2024224 ~ 2052143 (+)
LOC120556786 NA other downstream 547960 2385615 ~ 2387974 (+)
G35359 NA other downstream 650339 2487994 ~ 2494591 (+)
G35364 NA other downstream 745859 2583514 ~ 2588162 (+)
G35534 NA other downstream 909565 2747220 ~ 2747772 (+)

Expression


Co-expression Network