LOC120556786


Basic Information

Item Value
gene id LOC120556786
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 2385615 ~ 2387974 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU47237
ACATGTTCCTCTGTGGGATGGAGTAAGCAAGGACGGAGGACACCAAGACCTGGCACAGCCACAATCCATCAAAAGCAACAGCCCACTTTGTAGAGACAGATGTTCGTGGTGTGATATGTAACTGCCCttgttaaacttcaataaaagacaggcaaaagaggaagagagtcagAGCTCACTGGTGAGAAGCAGACTCGCCGAGTCTGCTTACGGAGTGATGCTCTCCTTCTATAGAAGCCTATTGTATTAAtacatatctgtgtctgtgaagtTGTTGCTATCTATTTCAGAGAAGAAGTCCTCACCTGGGAGTGCACCTTGGAAGCACGACAATTGGGGGCTCGTCCgggataaaaacaaaaagaggatTCTTCAAATTGGTTGGAAAAGTTCGGTCCAAGGGTGAAAGGTTGCGTTGAACATCTGGCGCCATAAATAAGGTAAGCAGACCATTATTCTGCATTGACTATTCTAAATCAAGGGTGTTCAACGTCTTAGTAACCCACAGACcgctaaaattaattaattaaatacataGTGACAACTTCCATTTTTATAAAAGGTACAGGAAATATGGTATGGTTTATGGAACAAATATGAGGAAATATTTGTGAAAGTCTGAGTTTGGCAACTCCACCCGTGTCCTGACGAGGAGCGGTTTTGGCTGGGTTGAAACACCCGAGAATTGAGacatcttaaaaacaaaaaggttaagTTAAGGTTAATAAGGGTAAGTCCTCCATAGTAGAGGTAAGTCCCAGGTAATTGTAGGGGTAAGTCCTCCATAGTAGAGGTAAGTCCCCCGGGGTAAGTCCTCCATAGTAGAGGTAAGTCCCCCGGGGTAAGTCCTCCATAGTAGAGGTAAGTCCCCTGGGGTAAGTCCTCCACAGTAGAGGTAAGTCCCAAAAGGAGTTGAAGTCTCCTAGGTATGACTGGTGAACGATTGTATTATTGAACCATTTCACACTATTTAGGTGATATGACAAAATAATCCAATGTTCACATGActtgttggttttggtgtcaGACAATTGAGCTAGTTCGATTGTCCAAAGGCTGAGAACCAGGGTATAGCGAGCCATAGATCTCAGCTGGCCAAAATCATAGGGAAACTTGATTTTGGTGTCAAATAGGAATATTACTTTCCTGTTTAAGGGTTGAGAACCAGGGACATAGTGTCCCATAAATCTCAACTGGCCACAatcaaggtttaaaaaaaaaaaaaaaatgaaatgaaaaattgaCTCATCCAAATTAAGGGTAATGCATGAATGACCAATGTGTATGAATGCTAAATAGAAGCAATTGAAGCAGCAGCACTGCCTGAAACCTGACGGTGTTAACATAAAGCAGTGGACTGTTGAAGTAAATTGTGGATATTTAGATCGAGGGATTTCTGTGTGGAAATTTAGAAGTATTGAGTGTGTGGCAGTTTTGGATAAATATTTCTGGCAAAATTAATAAGCATATTTTGGCAATCTCATAAAGACCAGTGTTACTAGTTAAGGAAATGGACGGAGAATTTGATAGAGAAATAGATGACGGGGGTGGGGAATTAAAGGAccatataattattattatatttaataaGTTGGGGAGCAGTTAGAAGTAATGGAAAAAGCAGTGAAAGCGGCCTATGGGACAGGGAAGGAGGCAGAGGATATGAtgatacaaatgaggaaagatgttAATCAGATACTGACCGATCAGGGGGAAATTGCTAAATGCACAGATCCACTGTTAGCAGCATTTTGGAGACAGGAAAAGAGAGCAGGTCAGGATCAGGAAGAAGCACAGAAAGATGTGAAAACAGGCAGTTGGTTAAAAAAGGGAGAAGCCAAGGATAGGAGAGATAAAGCAAGTCAAGATAGGAAGAAGTGGGCACTATGGGCGCTATTATGGCAGGGAGTGAGGCATCTAATGGTTGATAATACAGGTCATACACAACCACATAAACCTCCATCGTACTCACCACCTCAGCCCACTACAGGGTTGTACCCAGTGTTTGATGTTAAGGAAGGAGCAGTGGAAGTTACAGGGCTTGGCAGATGTGTCCCCTCAGCCCCGTTTGCGGGTCAGGACCAAACCCACAGAGGGAAGATTAGGCAACCAACTGATGAGTGGCAATTACAGAGACTCATGGCTTTAACTGCAGGGCACCCCACTCCTGACCTTTTCCCCATTCCTGATTGGATCccagcccctccacacacacaaccacaatccTATGCCCAACCCCCACCCTATAGGCGGGGTCCTCCCCAATGGCAACAAAATAGTGGGAGGGGAtatgggagaggaggagggagaccaGGGA
>XR_005638891.1
GAGTCTGCTTACGGAGTGATGCTCTCCTTCTATAGAAGCCTATTGTATTAAtacatatctgtgtctgtgaagtTGTTGCTATCTATTTCAGAGAAGAAGTCCTCACCTGGGAGTGCACCTTGGAAGCACGACAATTGGGGGCTCGTCCgggataaaaacaaaaagaggatTCTTCAAATTGGTTGGAAAAGTTCGGTCCAAGGGTGAAAGGTTGCGTTGAACATCTGGCGCCATAAATAAGGTAAGCAGACCATTATTCTGCATTGACTATTCTAAATCAAGGGTGTTCAACGTCTTAGTAACCCACAGACcgctaaaattaattaattaaatacataGTGACAACTTCCATTTTTATAAAAGGTACAGGAAATATGGTATGGTTTATGGAACAAATATGAGGAAATATTTGTGAAAGTCTGAGTTTGGCAACTCCACCCGTGTCCTGACGAGGAGCGGTTTTGGCTGGGTTGAAACACCCGAGAATTGAGacatcttaaaaacaaaaaggttaagTTAAGGTTAATAAGGGTAAGTCCTCCATAGTAGAGGTAAGTCCCAGGTAATTGTAGGGGTAAGTCCTCCATAGTAGAGGTAAGTCCCCCGGGGTAAGTCCTCCATAGTAGAGGTAAGTCCCCCGGGGTAAGTCCTCCATAGTAGAGGTAAGTCCCCTGGGGTAAGTCCTCCACAGTAGAGGTAAGTCCCAAAAGGAGTTGAAGTCTCCTAGGTATGACTGGTGAACGATTGTATTATTGAACCATTTCACACTATTTAGGTGATATGACAAAATAATCCAATGTTCACATGActtgttggttttggtgtcaGACAATTGAGCTAGTTCGATTGTCCAAAGGCTGAGAACCAGGGTATAGCGAGCCATAGATCTCAGCTGGCCAAAATCATAGGGAAACTTGATTTTGGTGTCAAATAGGAATATTACTTTCCTGTTTAAGGGTTGAGAACCAGGGACATAGTGTCCCATAAATCTCAACTGGCCACAatcaaggtttaaaaaaaaaaaaaaaatgaaatgaaaaattgaC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU47237 True 2317 TUCP 0.43 2 2385615 2387974
XR_005638891.1 False 1046 lncRNA 0.41 2 2385814 2386902

Neighbor

gene id symbol gene type direction distance location
ahcy ahcy coding upstream 419099 1938583 ~ 1966516 (+)
LOC120558247 NA coding upstream 429165 1956316 ~ 1956450 (+)
LOC120558248 NA coding upstream 433131 1952350 ~ 1952484 (+)
LOC120558249 NA coding upstream 438188 1947337 ~ 1947427 (+)
chmp4ba chmp4b,LOC101481733,LOC102786921,LOC102203309,LOC104933698,LOC107093444,LOC108243665 coding upstream 458969 1913110 ~ 1926646 (+)
LOC120558182 flnb coding downstream 252414 2640388 ~ 2734534 (+)
LOC120558018 NA coding downstream 347885 2735859 ~ 2745280 (+)
LOC120557397 NA coding downstream 422284 2810258 ~ 2818790 (+)
LOC120557395 NA coding downstream 438915 2826889 ~ 2836128 (+)
ccdc51 NA coding downstream 475562 2863536 ~ 2882763 (+)
G35336 NA non-coding upstream 63478 2263619 ~ 2322137 (+)
G35337 NA non-coding upstream 125638 2255859 ~ 2259977 (+)
G35328 NA non-coding upstream 292614 2092659 ~ 2093001 (+)
G35326 NA non-coding upstream 299262 2086087 ~ 2086353 (+)
G35325 NA non-coding upstream 305907 2079456 ~ 2079708 (+)
G35355 NA non-coding downstream 68097 2456071 ~ 2488787 (+)
G35357 NA non-coding downstream 72509 2460483 ~ 2502448 (+)
G35358 NA non-coding downstream 86102 2474076 ~ 2480941 (+)
G35361 NA non-coding downstream 93343 2481317 ~ 2591348 (+)
G35371 NA non-coding downstream 134766 2522740 ~ 2543207 (+)
asip1 NA other upstream 333472 2024224 ~ 2052143 (+)
G35295 LOC107380983,LOC102290002,LOC108241855,LOC108250349,LOC106456447,LOC101470105,LOC102800009,LOC102214284,LOC101480046,LOC102215411,LOC102307835 other upstream 547960 1811624 ~ 1837655 (+)
G35191 NA other upstream 1156447 1224083 ~ 1229168 (+)
G35175 NA other upstream 1235374 1149700 ~ 1150241 (+)
LOC120557002 LOC103372952 other upstream 1549648 756441 ~ 835967 (+)
G35359 NA other downstream 100020 2487994 ~ 2494591 (+)
G35364 NA other downstream 195540 2583514 ~ 2588162 (+)
G35534 NA other downstream 359246 2747220 ~ 2747772 (+)
G35578 NA other downstream 542950 2930924 ~ 3017125 (+)
G35618 NA other downstream 856257 3244231 ~ 3358820 (+)

Expression


Co-expression Network