G35358


Basic Information

Item Value
gene id G35358
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 2474076 ~ 2480941 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU47253
gcctggtatacactggctttaatacagcctggtatacactggctttaaaacagcctggtataaactggctttaatacagcctggtatacactggctttaatacagcctggtatacactggctttaatacagcccggtatacactggctttaatacagcctggtatacactggctttaatacagcctggtatacactggctttaaaacaagggatgggacacattcatgcagagaaaacatttaaactagaacacaaaagacagagagagagattacagaaacaacaaacagaaatgatgggAAATA

Function

GO: NA

KEGG:

id description
ko04141 Protein processing in endoplasmic reticulum
ko04612 Antigen processing and presentation

RNA

RNA id representative length rna type GC content exon number start site end site
TU47253 True 306 lncRNA 0.40 2 2474076 2480941

Neighbor

gene id symbol gene type direction distance location
ahcy ahcy coding upstream 507560 1938583 ~ 1966516 (+)
LOC120558247 NA coding upstream 517626 1956316 ~ 1956450 (+)
LOC120558248 NA coding upstream 521592 1952350 ~ 1952484 (+)
LOC120558249 NA coding upstream 526649 1947337 ~ 1947427 (+)
chmp4ba chmp4b,LOC101481733,LOC102786921,LOC102203309,LOC104933698,LOC107093444,LOC108243665 coding upstream 547430 1913110 ~ 1926646 (+)
LOC120558182 flnb coding downstream 159447 2640388 ~ 2734534 (+)
LOC120558018 NA coding downstream 254918 2735859 ~ 2745280 (+)
LOC120557397 NA coding downstream 329317 2810258 ~ 2818790 (+)
LOC120557395 NA coding downstream 345948 2826889 ~ 2836128 (+)
ccdc51 NA coding downstream 382595 2863536 ~ 2882763 (+)
G35332 NA non-coding upstream 72266 2154392 ~ 2401810 (+)
G35336 NA non-coding upstream 151939 2263619 ~ 2322137 (+)
G35337 NA non-coding upstream 214099 2255859 ~ 2259977 (+)
G35328 NA non-coding upstream 381075 2092659 ~ 2093001 (+)
G35326 NA non-coding upstream 387723 2086087 ~ 2086353 (+)
G35361 NA non-coding downstream 376 2481317 ~ 2591348 (+)
G35371 NA non-coding downstream 41799 2522740 ~ 2543207 (+)
G35372 NA non-coding downstream 55587 2536528 ~ 2648786 (+)
G35363 NA non-coding downstream 96693 2577634 ~ 2609516 (+)
G35374 NA non-coding downstream 140934 2621875 ~ 2622740 (+)
LOC120556786 NA other upstream 86102 2385615 ~ 2387974 (+)
asip1 NA other upstream 421933 2024224 ~ 2052143 (+)
G35295 LOC107380983,LOC102290002,LOC108241855,LOC108250349,LOC106456447,LOC101470105,LOC102800009,LOC102214284,LOC101480046,LOC102215411,LOC102307835 other upstream 636421 1811624 ~ 1837655 (+)
G35191 NA other upstream 1244908 1224083 ~ 1229168 (+)
G35175 NA other upstream 1323835 1149700 ~ 1150241 (+)
G35359 NA other downstream 7053 2487994 ~ 2494591 (+)
G35364 NA other downstream 102573 2583514 ~ 2588162 (+)
G35534 NA other downstream 266279 2747220 ~ 2747772 (+)
G35578 NA other downstream 449983 2930924 ~ 3017125 (+)
G35618 NA other downstream 763290 3244231 ~ 3358820 (+)

Expression


Co-expression Network