G35361


Basic Information

Item Value
gene id G35361
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 2481317 ~ 2591348 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU47259
tgtgtgtctgtgtgtgtgtctgagtgtctctctctctctctctctctctctccattactCACCCACTGGCctagtgtctctctctctctctctctctctctctctctctccattactCACCCACTGgcctagtctctctctctctccattactCACCCACTGgcctagtctctctctctctctctctctctctctctctccattactCACCCACTGGcctacagtctctctctctctctctctctctctctctctctctctctccattactCACCCACTGGCctagtgtctctctctctctctctct
>TU47260
cctccctgtaagaccagcacgcccagaatgcacctgaacacacctccctgtaagaccagcacgcccagaatgcacctgaacacacctccctgtaagaccagcacacccagaatgcacctgaacacacctccctgtaagaccacactgtttgtctctctctctctacctaccTACAGTTTGTCCATTACTCACCCACTGGCctagtgtctctctctctctctctctctctctctccattactCACCCACTGGCctagtgtctctctctctctctctctctctctctctctctccattactCACCCACTGgcctagtctctctctctctccattactCACCCACTGgcctagtctctctctctctctctctctctctctctctccattactCACCCACTGGcctacagtctctccattactCACCCACTGgcctagtctctctctctctctctctctcccattacTCACCCACTGGC
>TU47261
ctctctccctctctctctctctctgtctctctctctctctgtctctctctctctctctctctctctctctctctctctctctgtgtctctctctctctctcctctctgtgtctctctctctctctctctgtctctctgtctctctctctctctctctctgtctctctgtctctctctctctgtctctctctctctctctctctctctctctctctgtctctctctctctgtctctctgtctctctctctctctctctgtctctctgtctctctgtctctctctctctctc
>TU47262
ctctctccctctctctctctctctgtctctctctctctctgtctctctctctctctctctctctctctctctctctctctcTCCATTACTCACCCACTGGCctagtgtctctctctctctctctctctctctctccattactCACCCACTGGCctagtgtctctctctctctctctctctctctctctctctccattactCACCCACTGgcctagtctctctctctctccattactCACCCACTGgcctagtctctctctctctctctctctctctctctctccattactCACCCACTGGcctacagtctctctctctctctctctctctctctctctctctctctccattactCACCCACTGGCctagtgtctctctctctctctctct
>TU47263
ctctctccctctctctctctctctgtctctctctctctctgtctctctctctctctctctctctctctctctctctctctgtctctctgtctctctctctctgtctctctctctctctctctctctctctctctctgtctctctctctctgtctctctgtctctctctctctctctctgtctctctgtctctctgtctctctctctctctc
>TU47264
ctctctccctctctctctctctctgtctctctctctctctgtctctctctctctctctctctctctctctctctctctctcTCCATTACTCACCCACTGGCctagtgtctctctctctctctctctctctctctctctctcctcattaCTCCCACTGGCctagtgtctctctctctctctctctctctctccattactCACCCACTGGCctagtgtctctctctctctctccattactCACCCACTGgcctagtctctctctctctctctctctctctctctctccattactCACCCACTGGcctacagtctctctctctctctctctctctctctctctctctctctccattactCACCCACTGGCctagtgtctctctctctctctctctctctccattactCACCCACTGgcctagtctctctctctctctctctctcccattacTCACCCACTGGC
>TU47266
ctctctccctctctctctctctctgtctctctctctctctgtctctctctctctctctctctctctctctctctctctctctgtgtctctctctctctctcctctctgtgtctctctctctctctctctgtctctctgtctctctctctctctccctctctctctctctctctctctctctgtctctctctctgtctctctctgtctctctctctctctgtctctctctctgtctctctctccctctctctctctctctctctctctctctgtctctctgtctctctctctctgtctctctctctctgtctctctgtctctctctctctctctctgtctctctgtctctctgtctctctctctctctc
>TU47267
ctctctccctctctctctctctctgtctctctctctctctgtctctctctctctctctctctctctctctctctctctctctgtgtctctctctctctctcctctctgtgtctctctctctctctctctgtctctctgtctctctctctctctccctctctctctctctctctctctctctgtctctctctctgtctctctctgtctctctctctctctgtctctctctctgtctctctctccctctctctctctctctctctctctctctgtctctctgtctctctctctgtctctctgtctctctctctctctctctgtctctctgtctctctgtctctctctctgtctctctctctctctctctgtctctctgtctctctgtctctctctctctctc
>TU47268
ctctctccctctctctctctctctgtctctctctctctctgtctctctctctctctctctctctctctctctctctctctcTCCATTACTCACCCACTGGCctagtgtctctctctctctctctctctctctctctctctcctcattaCTCCCACTGGCctagtgtctctctctctctctctctctctctccattactCACCCACTGGCctagtgtctctctctctctctctctctctctctctctctccattactCACCCACTGgcctagtctctctctctctccattactCACCCACTGgcctagtctctctctctctctctctctctctctctctctccattactCACCCACTGgcctagtctctctctctctctctctctcccattacTCACCCACTGGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU47259 False 307 lncRNA 0.51 2 2481317 2590995
TU47260 True 475 lncRNA 0.53 3 2590451 2591348
TU47261 False 290 lncRNA 0.51 2 2508090 2508555
TU47262 False 390 lncRNA 0.52 3 2508090 2590995
TU47263 False 211 lncRNA 0.51 2 2508090 2508555
TU47264 False 460 lncRNA 0.52 4 2508090 2591348
TU47266 False 368 lncRNA 0.51 2 2508090 2508555
TU47267 False 400 lncRNA 0.51 2 2508090 2508555
TU47268 False 404 lncRNA 0.52 3 2508090 2591348

Neighbor

gene id symbol gene type direction distance location
ahcy ahcy coding upstream 514801 1938583 ~ 1966516 (+)
LOC120558247 NA coding upstream 524867 1956316 ~ 1956450 (+)
LOC120558248 NA coding upstream 528833 1952350 ~ 1952484 (+)
LOC120558249 NA coding upstream 533890 1947337 ~ 1947427 (+)
chmp4ba chmp4b,LOC101481733,LOC102786921,LOC102203309,LOC104933698,LOC107093444,LOC108243665 coding upstream 554671 1913110 ~ 1926646 (+)
LOC120558182 flnb coding downstream 49040 2640388 ~ 2734534 (+)
LOC120558018 NA coding downstream 144511 2735859 ~ 2745280 (+)
LOC120557397 NA coding downstream 218910 2810258 ~ 2818790 (+)
LOC120557395 NA coding downstream 235541 2826889 ~ 2836128 (+)
ccdc51 NA coding downstream 272188 2863536 ~ 2882763 (+)
G35358 NA non-coding upstream 376 2474076 ~ 2480941 (+)
G35332 NA non-coding upstream 79507 2154392 ~ 2401810 (+)
G35336 NA non-coding upstream 159180 2263619 ~ 2322137 (+)
G35337 NA non-coding upstream 221340 2255859 ~ 2259977 (+)
G35328 NA non-coding upstream 388316 2092659 ~ 2093001 (+)
G35374 NA non-coding downstream 30527 2621875 ~ 2622740 (+)
G35377 NA non-coding downstream 37439 2628787 ~ 2664101 (+)
G35379 NA non-coding downstream 114252 2705600 ~ 2706455 (+)
G35380 NA non-coding downstream 128726 2720074 ~ 2720701 (+)
G35541 NA non-coding downstream 167856 2759204 ~ 2759496 (+)
LOC120556786 NA other upstream 93343 2385615 ~ 2387974 (+)
asip1 NA other upstream 429174 2024224 ~ 2052143 (+)
G35295 LOC107380983,LOC102290002,LOC108241855,LOC108250349,LOC106456447,LOC101470105,LOC102800009,LOC102214284,LOC101480046,LOC102215411,LOC102307835 other upstream 643662 1811624 ~ 1837655 (+)
G35191 NA other upstream 1252149 1224083 ~ 1229168 (+)
G35175 NA other upstream 1331076 1149700 ~ 1150241 (+)
G35534 NA other downstream 155872 2747220 ~ 2747772 (+)
G35578 NA other downstream 339576 2930924 ~ 3017125 (+)
G35618 NA other downstream 652883 3244231 ~ 3358820 (+)
epha8 epha8,LOC102791453 other downstream 862252 3453600 ~ 3589612 (+)
G35791 LOC101072424,LOC104921976 other downstream 1357486 3948834 ~ 3950128 (+)

Expression


Co-expression Network